Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459650

Identifier: 77459650

GI number: 77459650

Start: 3909235

End: 3910164

Strand: Direct

Name: 77459650

Synonym: Pfl01_3428

Alternate gene names: NA

Gene position: 3909235-3910164 (Clockwise)

Preceding gene: 77459649

Following gene: 77459651

Centisome position: 60.72

GC content: 62.58

Gene sequence:

>930_bases
ATGATCATCGATATCAGTTGCTATCCCACGGATCTCGTGGACCTCGCCTGGAGGCATGACGGTGACCCGTTCACCGGCGA
GCGTCTGCTGGAGATGATGGATGGCCCGTACATGGTCAACGGCAAGCCTCGCCGCATCGACAAAGCCTTCATCCAGCCGC
CGCAGGGCAACACCATTTACACCTGGACCGACGGCGAACTGTCGGGCCGCGAATCCATCGACGCCTACATGGCCTACACC
CTGAAAATGGTCCAGACCTACCCGGACCGTTTCATCGGCTGCTTCGTCTACAACCCGCGCTGCGGCGTGGAAAACGGCGT
CGAGGCAATCGAGCGCTACGTCAAGGAACACGGTTTCAAGATGGTGCAGATGCAGGCCAACATGCACGCCTACCGGCCTG
ACCGTGCGCTGGACTGGGTGCGTCCGGCCTTCGAGAAATGCGCCGAGCTGGGCATTCCGGTCAAGCTGCACACCGGCGAC
GGGCCTTACAGCATCCCGTCGGAATGGGTGCCGATGATCAAGGAGTTCCCCAACGTCGATTTCATCATGGCCCACTTCGG
CGTGCAGACCGGCGGCGTCTACGTGTTCGAACCGATGCAGTGGGCGATGGAGCTGCCCAACGTCTACTGCGAGTCCGGCT
GGTGCCTGCAATCGCGGATCGTCGAGTTCGCCAAGGTCCTGCCGACCCACAAGATCCTGTTCGGCACCGATACCCCGCCG
AACGAGCCGGGTATGTGGCTGCGCCTGCTCGAAGTGCTCTGCCACGAGCCGCCGCAGGGCCTGAACCTCGACGAGGACAC
CCTCGAGGATTACCTGGGCAACAACACCGCACGGATGATCGGCCTTCAGCCGTCCCCGCCGCCGCGTTCCGTTTCCGAAG
CAGAGGCGCAACTCAAGCGCCCCGTCACCACTCAACTGGCCAGGAGCTGA

Upstream 100 bases:

>100_bases
GGGAATGCGCGAGTGCTGCGCATAGAAACGGCCGATTGCCCGGGACGTGGATGCTGTGAGCCGCAAGGCTCCCTTCCCCG
CTATCAGGAGATCGACTTCA

Downstream 100 bases:

>100_bases
ACCGATGATCATTGACACCCATCTGCACCCCACCAATCTGGTCGACGAGGCCTGGCGCCACACCGGCGAACCGTTCACCG
GCGAGCGCATGCTCAAGCTG

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT
LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD
GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP
NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS

Sequences:

>Translated_309_residues
MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT
LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD
GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP
NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS
>Mature_309_residues
MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT
LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD
GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP
NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35182; Mature: 35182

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIY
CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEE
TWTDGELSGRESIDAYMAYTLKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFK
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCE
MVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGDGPYSIPSEWVPMIKEFPNVD
EEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC
FIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP
EEEEECCCCCCCEEEECHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKR
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHC
PVTTQLARS
CHHHHHHCC
>Mature Secondary Structure
MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIY
CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEE
TWTDGELSGRESIDAYMAYTLKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFK
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCE
MVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGDGPYSIPSEWVPMIKEFPNVD
EEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC
FIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP
EEEEECCCCCCCEEEECHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKR
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHC
PVTTQLARS
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA