| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459650
Identifier: 77459650
GI number: 77459650
Start: 3909235
End: 3910164
Strand: Direct
Name: 77459650
Synonym: Pfl01_3428
Alternate gene names: NA
Gene position: 3909235-3910164 (Clockwise)
Preceding gene: 77459649
Following gene: 77459651
Centisome position: 60.72
GC content: 62.58
Gene sequence:
>930_bases ATGATCATCGATATCAGTTGCTATCCCACGGATCTCGTGGACCTCGCCTGGAGGCATGACGGTGACCCGTTCACCGGCGA GCGTCTGCTGGAGATGATGGATGGCCCGTACATGGTCAACGGCAAGCCTCGCCGCATCGACAAAGCCTTCATCCAGCCGC CGCAGGGCAACACCATTTACACCTGGACCGACGGCGAACTGTCGGGCCGCGAATCCATCGACGCCTACATGGCCTACACC CTGAAAATGGTCCAGACCTACCCGGACCGTTTCATCGGCTGCTTCGTCTACAACCCGCGCTGCGGCGTGGAAAACGGCGT CGAGGCAATCGAGCGCTACGTCAAGGAACACGGTTTCAAGATGGTGCAGATGCAGGCCAACATGCACGCCTACCGGCCTG ACCGTGCGCTGGACTGGGTGCGTCCGGCCTTCGAGAAATGCGCCGAGCTGGGCATTCCGGTCAAGCTGCACACCGGCGAC GGGCCTTACAGCATCCCGTCGGAATGGGTGCCGATGATCAAGGAGTTCCCCAACGTCGATTTCATCATGGCCCACTTCGG CGTGCAGACCGGCGGCGTCTACGTGTTCGAACCGATGCAGTGGGCGATGGAGCTGCCCAACGTCTACTGCGAGTCCGGCT GGTGCCTGCAATCGCGGATCGTCGAGTTCGCCAAGGTCCTGCCGACCCACAAGATCCTGTTCGGCACCGATACCCCGCCG AACGAGCCGGGTATGTGGCTGCGCCTGCTCGAAGTGCTCTGCCACGAGCCGCCGCAGGGCCTGAACCTCGACGAGGACAC CCTCGAGGATTACCTGGGCAACAACACCGCACGGATGATCGGCCTTCAGCCGTCCCCGCCGCCGCGTTCCGTTTCCGAAG CAGAGGCGCAACTCAAGCGCCCCGTCACCACTCAACTGGCCAGGAGCTGA
Upstream 100 bases:
>100_bases GGGAATGCGCGAGTGCTGCGCATAGAAACGGCCGATTGCCCGGGACGTGGATGCTGTGAGCCGCAAGGCTCCCTTCCCCG CTATCAGGAGATCGACTTCA
Downstream 100 bases:
>100_bases ACCGATGATCATTGACACCCATCTGCACCCCACCAATCTGGTCGACGAGGCCTGGCGCCACACCGGCGAACCGTTCACCG GCGAGCGCATGCTCAAGCTG
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS
Sequences:
>Translated_309_residues MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS >Mature_309_residues MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIYTWTDGELSGRESIDAYMAYT LKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFKMVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGD GPYSIPSEWVPMIKEFPNVDFIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKRPVTTQLARS
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35182; Mature: 35182
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIY CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEE TWTDGELSGRESIDAYMAYTLKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFK EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCE MVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGDGPYSIPSEWVPMIKEFPNVD EEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC FIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP EEEEECCCCCCCEEEECHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKR CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHC PVTTQLARS CHHHHHHCC >Mature Secondary Structure MIIDISCYPTDLVDLAWRHDGDPFTGERLLEMMDGPYMVNGKPRRIDKAFIQPPQGNTIY CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEE TWTDGELSGRESIDAYMAYTLKMVQTYPDRFIGCFVYNPRCGVENGVEAIERYVKEHGFK EECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCE MVQMQANMHAYRPDRALDWVRPAFEKCAELGIPVKLHTGDGPYSIPSEWVPMIKEFPNVD EEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC FIMAHFGVQTGGVYVFEPMQWAMELPNVYCESGWCLQSRIVEFAKVLPTHKILFGTDTPP EEEEECCCCCCCEEEECHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC NEPGMWLRLLEVLCHEPPQGLNLDEDTLEDYLGNNTARMIGLQPSPPPRSVSEAEAQLKR CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHC PVTTQLARS CHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA