| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorB [H]
Identifier: 77459647
GI number: 77459647
Start: 3905325
End: 3907532
Strand: Reverse
Name: iorB [H]
Synonym: Pfl01_3425
Alternate gene names: 77459647
Gene position: 3907532-3905325 (Counterclockwise)
Preceding gene: 77459648
Following gene: 77459646
Centisome position: 60.69
GC content: 63.36
Gene sequence:
>2208_bases ATGAGCCTCATCGACGGCACCCTTCAAGAACCCTCGCGCCGGGTGTTTCTCAAACAGGCGGTGACAGTGGCGTCCGGTCT GGCGATTGCGCTGTACCTGCCTTCCGGTGCGGCGGCGACTGAGCCGAAAACCTCGACCACTGAATTCGAACCCAACGCCT GGGTGCGCGTGCTGCCCGACGGCACGGTGAAACTGGTGGTGCACAAGCACGATTCCGGCACCGGCACCCAGACCGCGCTG GCCGCATGTGTAGCCGAGGAACTGGACGTCAACCCGATGACCGTGCAGGTCATCACCCCGGAAAATCCGTTCTTCGAAAC CTACATTCATCCGGTCTGGAAAGTCTTCTCCACCGGCGGCAGCACCAGTGTGTCGCTGGAGTACGATCGCTTGCGCATGG CTGGCGCCACGGCGCGGGCGCTGCTGATCAGTGCGGCGGCGCAGCAGTGGAAAGTCAGCCCCGACAGTTGCTCCACCGAA GAAGGCCGGGTCGTGCATGCGTCGAGCAAGCGCAGCCTCGGCTACGGCGAAGTGGCCGGCGCGGCGGCGCATCTGTCGGC ACCGGCCAACGTCACGCTGAAGGATCCGGCGCAGTTCAAATACATCGGAAAATTGCGTCACAAACGCGATGCGGCGGCCA AGGTTTGCGGGCGCTTCAATTACAGCATCGACGTGCAGTTGCCGGGGATGTTGGTGGCGGTAATCCAGCGTGCGCCGGTG GTGGGCGCGAAGGTTGTCGCAGTGGATTCGGCGGCCGCATTGCAGGTGCCGGGCGTGCGCAAGGTGATCGCGGTTCCAGG ACGTCCGGACGTGCTCGGCGGCAACCTCGAAGGCGTCGCGGTGCTAGCCGAAACGTTCTGGGCTGCGCAGCAGGGACGTC AGTTGCTGGAGATCAAATGGAGCGACTCGCCGCTGGCCGGCTTCGACAGCGCCGATCTGGCCAAGGCACAGATCGCAGCG ATCAGCGACCCGGCAACGCAAACCGTCAAAGCCATGGCCCAGGGCGATGTCGCCGGGCAATGGCCGGGTGCTGCGAAGCT GCTCGAAGCCGATTACACCATGCCCTACAAGGTGCAAAACCCGCTGGAGCCGATCTGCATCACTGCGCAAGTCAAGGACA AGGCAATCACCTATTGGGGCGGCGTGCAGGTGCCGTCCTCGGCACTGGAAGCGGCGCAGACCGTGTGCGGCATCGCCAAG GACAAGGTCACCATCCATGAACTGGTGTCCGGTGGCAGCTTCGGTGCGCGGGAAGCCAAATACTGGTTGTTCGAGGTCGC GTATCTGGCGCAGAAAACCGGCGTGCCGGTGAAACTGCTCAACAGTCGCGAAGACGAAATGCACGCGCTGTTCTATCACC CGGCCACGCTGCATCGGGTGAAAGGTGCACTGGATGCCCAGGGCAAACTCACGGCGTTGCAACTGCATGCAGTGTCACCG GCCTCGCCGGAACAGTGGGAGCCGGGCTATTTCGAGCGTCCGGATCACATGGATTACAGCACCACCGAAGCAATCACCGC GTGGGACTTCGCCTACCGTCCGCCGCACCTGGAGCTGAACTGGGTCAAGCACGAAAGCAACGTGCCCAGCGGTTGGTATC GCTCGGTCAGTTTCATTCCCAACGTGTTCGCTGTGGAGAGCTTTATGGATGAACTGGCCCATGCGGCCGGCAAAGATCCG CTGGCGTTCAGACTGGCCAGCATGCAGGAGCGGCCATGGCATGTCGCTGTGTTGAAGCAGGCCGCCGAACGCGCCGGTTG GGGGCAGAAGCTGCCGCCGGACACGGCGCTGGGGATTGCGACCAATCAGGGTTACACCAGTTTCATCGCCGTGGTGGCGC GGGTCGCGAAGGTGGATGGCAAGGCGCGGGTCGAGAAGCTGACCTGCGTGGTCGATTGCGGTCTGGCGGTGTCGCCGGGC GGTGTCGAAGAGCAGATTTACGGCGGACTGATGTGGGGCCTCGGGCATGCGCTGTTCGACCGTCTCGACATCCAGCAGGG CCGGGTGGTGCAGAGCAATTTTCACGACTATCGCGTCACGCGCATGTCGGACATGCCGCCCGTGGACATCCTCGTGCTCA ATGGCCAGCCGGATAAACCGGGCGGTGTGGGAGAACTGGGCAGTCCTTCGGTGGTCCCGGCGATTGCCAATGCGCTATTC AGCCTGACCGGGGTGCGTCAGCGTTCCACGCCACTGAACCTGGGGTAA
Upstream 100 bases:
>100_bases CGATCCGCAACGCGATGTCCGGGAATATCTGCCGCTGCGGCACGTACGGGCGCATCAACAAAGCGATCAAACGGGCGGCG AATGCGCCGAAGGAGGCGTG
Downstream 100 bases:
>100_bases GCCGCCATGGACCTGCGTTTGCTGCGGTACTTCATGGCCCTGGCCGATGAGCTGCACTTTGGCCGCGCCGCCGAACGGCT GCACATCTGCCAGCCGCCGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MSLIDGTLQEPSRRVFLKQAVTVASGLAIALYLPSGAAATEPKTSTTEFEPNAWVRVLPDGTVKLVVHKHDSGTGTQTAL AACVAEELDVNPMTVQVITPENPFFETYIHPVWKVFSTGGSTSVSLEYDRLRMAGATARALLISAAAQQWKVSPDSCSTE EGRVVHASSKRSLGYGEVAGAAAHLSAPANVTLKDPAQFKYIGKLRHKRDAAAKVCGRFNYSIDVQLPGMLVAVIQRAPV VGAKVVAVDSAAALQVPGVRKVIAVPGRPDVLGGNLEGVAVLAETFWAAQQGRQLLEIKWSDSPLAGFDSADLAKAQIAA ISDPATQTVKAMAQGDVAGQWPGAAKLLEADYTMPYKVQNPLEPICITAQVKDKAITYWGGVQVPSSALEAAQTVCGIAK DKVTIHELVSGGSFGAREAKYWLFEVAYLAQKTGVPVKLLNSREDEMHALFYHPATLHRVKGALDAQGKLTALQLHAVSP ASPEQWEPGYFERPDHMDYSTTEAITAWDFAYRPPHLELNWVKHESNVPSGWYRSVSFIPNVFAVESFMDELAHAAGKDP LAFRLASMQERPWHVAVLKQAAERAGWGQKLPPDTALGIATNQGYTSFIAVVARVAKVDGKARVEKLTCVVDCGLAVSPG GVEEQIYGGLMWGLGHALFDRLDIQQGRVVQSNFHDYRVTRMSDMPPVDILVLNGQPDKPGGVGELGSPSVVPAIANALF SLTGVRQRSTPLNLG
Sequences:
>Translated_735_residues MSLIDGTLQEPSRRVFLKQAVTVASGLAIALYLPSGAAATEPKTSTTEFEPNAWVRVLPDGTVKLVVHKHDSGTGTQTAL AACVAEELDVNPMTVQVITPENPFFETYIHPVWKVFSTGGSTSVSLEYDRLRMAGATARALLISAAAQQWKVSPDSCSTE EGRVVHASSKRSLGYGEVAGAAAHLSAPANVTLKDPAQFKYIGKLRHKRDAAAKVCGRFNYSIDVQLPGMLVAVIQRAPV VGAKVVAVDSAAALQVPGVRKVIAVPGRPDVLGGNLEGVAVLAETFWAAQQGRQLLEIKWSDSPLAGFDSADLAKAQIAA ISDPATQTVKAMAQGDVAGQWPGAAKLLEADYTMPYKVQNPLEPICITAQVKDKAITYWGGVQVPSSALEAAQTVCGIAK DKVTIHELVSGGSFGAREAKYWLFEVAYLAQKTGVPVKLLNSREDEMHALFYHPATLHRVKGALDAQGKLTALQLHAVSP ASPEQWEPGYFERPDHMDYSTTEAITAWDFAYRPPHLELNWVKHESNVPSGWYRSVSFIPNVFAVESFMDELAHAAGKDP LAFRLASMQERPWHVAVLKQAAERAGWGQKLPPDTALGIATNQGYTSFIAVVARVAKVDGKARVEKLTCVVDCGLAVSPG GVEEQIYGGLMWGLGHALFDRLDIQQGRVVQSNFHDYRVTRMSDMPPVDILVLNGQPDKPGGVGELGSPSVVPAIANALF SLTGVRQRSTPLNLG >Mature_734_residues SLIDGTLQEPSRRVFLKQAVTVASGLAIALYLPSGAAATEPKTSTTEFEPNAWVRVLPDGTVKLVVHKHDSGTGTQTALA ACVAEELDVNPMTVQVITPENPFFETYIHPVWKVFSTGGSTSVSLEYDRLRMAGATARALLISAAAQQWKVSPDSCSTEE GRVVHASSKRSLGYGEVAGAAAHLSAPANVTLKDPAQFKYIGKLRHKRDAAAKVCGRFNYSIDVQLPGMLVAVIQRAPVV GAKVVAVDSAAALQVPGVRKVIAVPGRPDVLGGNLEGVAVLAETFWAAQQGRQLLEIKWSDSPLAGFDSADLAKAQIAAI SDPATQTVKAMAQGDVAGQWPGAAKLLEADYTMPYKVQNPLEPICITAQVKDKAITYWGGVQVPSSALEAAQTVCGIAKD KVTIHELVSGGSFGAREAKYWLFEVAYLAQKTGVPVKLLNSREDEMHALFYHPATLHRVKGALDAQGKLTALQLHAVSPA SPEQWEPGYFERPDHMDYSTTEAITAWDFAYRPPHLELNWVKHESNVPSGWYRSVSFIPNVFAVESFMDELAHAAGKDPL AFRLASMQERPWHVAVLKQAAERAGWGQKLPPDTALGIATNQGYTSFIAVVARVAKVDGKARVEKLTCVVDCGLAVSPGG VEEQIYGGLMWGLGHALFDRLDIQQGRVVQSNFHDYRVTRMSDMPPVDILVLNGQPDKPGGVGELGSPSVVPAIANALFS LTGVRQRSTPLNLG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=127, Percent_Identity=33.0708661417323, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 78886; Mature: 78755
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDGTLQEPSRRVFLKQAVTVASGLAIALYLPSGAAATEPKTSTTEFEPNAWVRVLPD CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC GTVKLVVHKHDSGTGTQTALAACVAEELDVNPMTVQVITPENPFFETYIHPVWKVFSTGG CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC STSVSLEYDRLRMAGATARALLISAAAQQWKVSPDSCSTEEGRVVHASSKRSLGYGEVAG CEEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHC AAAHLSAPANVTLKDPAQFKYIGKLRHKRDAAAKVCGRFNYSIDVQLPGMLVAVIQRAPV CHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC VGAKVVAVDSAAALQVPGVRKVIAVPGRPDVLGGNLEGVAVLAETFWAAQQGRQLLEIKW CCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE SDSPLAGFDSADLAKAQIAAISDPATQTVKAMAQGDVAGQWPGAAKLLEADYTMPYKVQN CCCCCCCCCCCHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCEEECC PLEPICITAQVKDKAITYWGGVQVPSSALEAAQTVCGIAKDKVTIHELVSGGSFGAREAK CCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCCHHH YWLFEVAYLAQKTGVPVKLLNSREDEMHALFYHPATLHRVKGALDAQGKLTALQLHAVSP HHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEEEECCC ASPEQWEPGYFERPDHMDYSTTEAITAWDFAYRPPHLELNWVKHESNVPSGWYRSVSFIP CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCC NVFAVESFMDELAHAAGKDPLAFRLASMQERPWHVAVLKQAAERAGWGQKLPPDTALGIA CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE TNQGYTSFIAVVARVAKVDGKARVEKLTCVVDCGLAVSPGGVEEQIYGGLMWGLGHALFD ECCCHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHH RLDIQQGRVVQSNFHDYRVTRMSDMPPVDILVLNGQPDKPGGVGELGSPSVVPAIANALF HHCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH SLTGVRQRSTPLNLG HHHCCCCCCCCCCCC >Mature Secondary Structure SLIDGTLQEPSRRVFLKQAVTVASGLAIALYLPSGAAATEPKTSTTEFEPNAWVRVLPD CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC GTVKLVVHKHDSGTGTQTALAACVAEELDVNPMTVQVITPENPFFETYIHPVWKVFSTGG CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC STSVSLEYDRLRMAGATARALLISAAAQQWKVSPDSCSTEEGRVVHASSKRSLGYGEVAG CEEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHC AAAHLSAPANVTLKDPAQFKYIGKLRHKRDAAAKVCGRFNYSIDVQLPGMLVAVIQRAPV CHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC VGAKVVAVDSAAALQVPGVRKVIAVPGRPDVLGGNLEGVAVLAETFWAAQQGRQLLEIKW CCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEE SDSPLAGFDSADLAKAQIAAISDPATQTVKAMAQGDVAGQWPGAAKLLEADYTMPYKVQN CCCCCCCCCCCHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCEEECC PLEPICITAQVKDKAITYWGGVQVPSSALEAAQTVCGIAKDKVTIHELVSGGSFGAREAK CCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCCHHH YWLFEVAYLAQKTGVPVKLLNSREDEMHALFYHPATLHRVKGALDAQGKLTALQLHAVSP HHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEEEECCC ASPEQWEPGYFERPDHMDYSTTEAITAWDFAYRPPHLELNWVKHESNVPSGWYRSVSFIP CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCC NVFAVESFMDELAHAAGKDPLAFRLASMQERPWHVAVLKQAAERAGWGQKLPPDTALGIA CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE TNQGYTSFIAVVARVAKVDGKARVEKLTCVVDCGLAVSPGGVEEQIYGGLMWGLGHALFD ECCCHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHH RLDIQQGRVVQSNFHDYRVTRMSDMPPVDILVLNGQPDKPGGVGELGSPSVVPAIANALF HHCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH SLTGVRQRSTPLNLG HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]