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The map label for this gene is 77459628

Identifier: 77459628

GI number: 77459628

Start: 3885692

End: 3886234

Strand: Direct

Name: 77459628

Synonym: Pfl01_3406

Alternate gene names: NA

Gene position: 3885692-3886234 (Clockwise)

Preceding gene: 77459622

Following gene: 77459629

Centisome position: 60.35

GC content: 61.88

Gene sequence:

>543_bases
ATGGCAGAAAGTACCCAGCACAAGCTCGACCGGGTTCGCCCGCCCCGCGTGCAAATCACCTATGACGTCGAAATCGGCAA
CGCCATCGAGAAAAAGGAATTGCCGCTGGTGGTCGGCATCCTCGCCGACCTCTCGGGCAAGCCGCTCGAACCATTGGCAA
AACTGACCGAACGCCGTTTCACCGAAATCGACCGCGACAACTTCAACGACGTCCTCGCCTCCATCGCGCCCCGCGCCACG
CTGCAAGTCAACAACACCCTCAGCGGCGACGACAGCAAGCTCAACATCGAACTCAACTTCAAGCACATCGACGACTTCGA
CCCGGTCAAGGTGGTGGAGCAAGTCACGCCGCTGCGGCGTCTGTTCGAAGCCCGCCAGCGCCTGCGCGACCTGCTGACCA
AACTCGACGGCAATGACGATCTGGACAAGCTGCTGCGCGACGTCATCGCCAACACCGAAGGCTTGCAAGAGATCAAGTCG
GCCCGCCCGGACACCGCTGTCCCGGCCGCTGATACCGAAGCTCCGGCCGAACCGCAAGCCTGA

Upstream 100 bases:

>100_bases
GTCATCTGCCACCCTTTCTAACCTGTGGTCCAGCAAGGGAAAGCGATGAACGGGCCTCCCCGATGCATTGCGCCCGCTCA
TCGCATCGGAGTCCGCCGAC

Downstream 100 bases:

>100_bases
TCGTCCACCTGACCGAGGAAGAATTCGCCATGCCCGCCGCCGCCCAGAATCAAGCCAGCGAAAATGCTGCCGCCGAGACT
TTATCCCTGCTCGATCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; T6ss S; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion Protein Family; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRFTEIDRDNFNDVLASIAPRAT
LQVNNTLSGDDSKLNIELNFKHIDDFDPVKVVEQVTPLRRLFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKS
ARPDTAVPAADTEAPAEPQA

Sequences:

>Translated_180_residues
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRFTEIDRDNFNDVLASIAPRAT
LQVNNTLSGDDSKLNIELNFKHIDDFDPVKVVEQVTPLRRLFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKS
ARPDTAVPAADTEAPAEPQA
>Mature_179_residues
AESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRFTEIDRDNFNDVLASIAPRATL
QVNNTLSGDDSKLNIELNFKHIDDFDPVKVVEQVTPLRRLFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSA
RPDTAVPAADTEAPAEPQA

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20140; Mature: 20009

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRF
CCCCHHHHHHCCCCCCEEEEEEEEECCCHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
TEIDRDNFNDVLASIAPRATLQVNNTLSGDDSKLNIELNFKHIDDFDPVKVVEQVTPLRR
HHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPDTAVPAADTEAPAEPQA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLAKLTERRF
CCCHHHHHHCCCCCCEEEEEEEEECCCHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
TEIDRDNFNDVLASIAPRATLQVNNTLSGDDSKLNIELNFKHIDDFDPVKVVEQVTPLRR
HHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPDTAVPAADTEAPAEPQA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA