| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459629
Identifier: 77459629
GI number: 77459629
Start: 3886264
End: 3887748
Strand: Direct
Name: 77459629
Synonym: Pfl01_3407
Alternate gene names: NA
Gene position: 3886264-3887748 (Clockwise)
Preceding gene: 77459628
Following gene: 77459630
Centisome position: 60.36
GC content: 62.02
Gene sequence:
>1485_bases ATGCCCGCCGCCGCCCAGAATCAAGCCAGCGAAAATGCTGCCGCCGAGACTTTATCCCTGCTCGATCGAATCATCGCCGA GGGCCGCATGGCCCATGACGACAGTCAGCAGGATTACGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTACTCGACG AAGGCATGGCCATCGACAAGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGACGAACTGATCAGCGCCCAG CTCAACGAAGTGCTGCATCACCCGGACCTGCAAAAACTCGAAGCGTCCTGGCGTGGCCTGCACATGCTGGTGCAGAACAC CGAAACCAGCACCCGGCTGAAACTGCGCCTGCTCAACGTGACCCAGAAAGAGCTGCAGAACGACCTGGAAAAAGCCGTCG AATTCGACCAGAGCGCGCTGTTCAAAAAGATCTATGAAGAGGAATACGGCACCTTCGGTGGTCACCCGTTCAGCCTGCTG GTGGGCGACTACACCTTCGGCCGCCACCCGCAGGACATCGGCCTGCTGGAGAAACTGTCGAACGTCGCCGCCGCTGCCCA CGCGCCGTTCATTGCCGCCGCCAGCCCGCGTCTGTTCGACATGAACAGCTTCACCGAACTGGCCGTGCCGCGTGATCTGT CGAAAGTGTTCGAGAGCCAGGAACTGATCAAGTGGCGCTCGTTCCGTGAAAGCGAAGACTCGCGTTACGTCTCGCTAGTG CTGCCGCACTTCCTGCTGCGTCTGCCTTACGGCCCGGACACTTCGCCAGTGGAAGGCATCAACTACGTCGAAGACACCAA CGGCACCGACCACAGCAAATACCTGTGGGGTAACGCCGCGTGGGCGCTGTCGCAACGCATCACCGAAGCCTTTGCCAAGT ACGGCTGGTGCGCGGCGATCCGTGGCGCTGAAGGCGGCGGCGCGGTTGAAGGCCTGCCCGCGCACACCTTCCGCACCAGC TCCGGTGATCTGTCGCTCAAATGCCCGACCGAAGTGGCGATCACCGACCGCCGCGAGAAGGAACTCAACGACCTCGGCTT CATCGCCCTGTGCCACAAGAAGAACAGCGACGTCGCGGTGTTCTTCGGCGGCCAGACCACCAACAAATCCAAGGTCTACA ACACCAACGAGGCCAACGCCAACGCACGGATCTCGGCGATGTTGCCGTACGTGCTCGCGGCCTCGCGTTTCGCCCATTAC CTGAAGGTGATCATGCGCGACAAGGTCGGCAGCTTCATGACCCGCGACAACGTGCAGACCTACCTCAACAACTGGATCGC CGACTACGTGCTGATCAACGACAACGCTCCGCAGGAGATCAAGGCGCAGTACCCGTTGCGTGAAGCGCGGGTGGATGTCA CCGAAGTCGCCGGCAAGCCCGGTGCCTATCGCGCGACGGTGTTCCTGCGGCCGCACTTCCAGCTCGAAGAGCTGACCGCG TCGATCCGCCTGGTCGCGACCCTGCCGCCACCGGTAGCCGCCTGA
Upstream 100 bases:
>100_bases TCAAGTCGGCCCGCCCGGACACCGCTGTCCCGGCCGCTGATACCGAAGCTCCGGCCGAACCGCAAGCCTGATCGTCCACC TGACCGAGGAAGAATTCGCC
Downstream 100 bases:
>100_bases CCCGCCTGCGCCCGCAGGATTTCCTGCGGGCGCTCCCCTGTTTGCCTGGCACGACACCTTTCAGGAGTTTCAAGCGATGG ATGCAATCATTCTCGACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MPAAAQNQASENAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDKDTVAMINDRISQIDELISAQ LNEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNVTQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLL VGDYTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLV LPHFLLRLPYGPDTSPVEGINYVEDTNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTFRTS SGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAVFFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHY LKVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTA SIRLVATLPPPVAA
Sequences:
>Translated_494_residues MPAAAQNQASENAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDKDTVAMINDRISQIDELISAQ LNEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNVTQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLL VGDYTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLV LPHFLLRLPYGPDTSPVEGINYVEDTNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTFRTS SGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAVFFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHY LKVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTA SIRLVATLPPPVAA >Mature_493_residues PAAAQNQASENAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDKDTVAMINDRISQIDELISAQL NEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNVTQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLV GDYTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLVL PHFLLRLPYGPDTSPVEGINYVEDTNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTFRTSS GDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAVFFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHYL KVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTAS IRLVATLPPPVAA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55043; Mature: 54912
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAQNQASENAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDK CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC DTVAMINDRISQIDELISAQLNEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEHHH TQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLVGDYTFGRHPQDIGLLEKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLV HHHHHHCCCEEEECCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LPHFLLRLPYGPDTSPVEGINYVEDTNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAI HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEE RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAV ECCCCCCCCCCCCCCEEECCCCCEEEECCCCEEECCCHHHHHCCCCEEEEEECCCCCEEE FFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQT EECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTA HHHHHHHEEEEECCCCCHHHHHCCCHHHHCCCHHHHCCCCCCEEEEEEECCCCCHHHHHH SIRLVATLPPPVAA EEEEEEECCCCCCC >Mature Secondary Structure PAAAQNQASENAAAETLSLLDRIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC DTVAMINDRISQIDELISAQLNEVLHHPDLQKLEASWRGLHMLVQNTETSTRLKLRLLNV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCEEEEEEHHH TQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLVGDYTFGRHPQDIGLLEKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLSKVFESQELIKWRSFRESEDSRYVSLV HHHHHHCCCEEEECCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LPHFLLRLPYGPDTSPVEGINYVEDTNGTDHSKYLWGNAAWALSQRITEAFAKYGWCAAI HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEE RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFIALCHKKNSDVAV ECCCCCCCCCCCCCCEEECCCCCEEEECCCCEEECCCHHHHHCCCCEEEEEECCCCCEEE FFGGQTTNKSKVYNTNEANANARISAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQT EECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYRATVFLRPHFQLEELTA HHHHHHHEEEEECCCCCHHHHHCCCHHHHCCCHHHHCCCCCCEEEEEEECCCCCHHHHHH SIRLVATLPPPVAA EEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA