| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459616
Identifier: 77459616
GI number: 77459616
Start: 3870510
End: 3871019
Strand: Reverse
Name: 77459616
Synonym: Pfl01_3394
Alternate gene names: NA
Gene position: 3871019-3870510 (Counterclockwise)
Preceding gene: 77459618
Following gene: 77459614
Centisome position: 60.12
GC content: 57.25
Gene sequence:
>510_bases ATGCCGACCTGTTCCGCGTTTCAAGTGTTCTGCCCATTTATGCCCAATCAGACCATCAAGACCCCCTGCGTCGGCCTCTG CTCCACCGTTTACGGTGATCTGGTGTGCCGTGGCTGCAAGCGTTTCCACCACGAAGTGATCCATTGGAACGGTTACAACG AGGAAGAAAAGCGTGCGGTGTGGCTGCGTCTTGAGCAATTGCTGTCACAAGTGATGGCGAGCAAGGTCGAGGTCTTCGAT CCGGCGCGCCTGCGTCTGCAACTGGAGCAGCGCAAGATCCGCTTCGTGCCGCATCAGTCGGAATATTGCTGGGCGTATCA GCTGATCGCCCGGGGCGCGCGGGTGATCATTAATCTGGAAGCCTACGGAATGGTATTGCTGCCGGAATTTCGCGACTGGA ACCTGCCGGAACTGCGCGATGCCATTGATCGGGAATTTTTCCTGCTGTCGGAAGCGCACTATCAGCGCTACATCGCACCC GGATTTCTGAAGGATGCGCTGGGCGACTGA
Upstream 100 bases:
>100_bases CTATTGGACTTTGGTTGCGTTGTGCGCGGCTCGGGCAAACCTTGATCCAGCGCTTGCCCCTGACGTTTGAGGGGTGATGA ATGGCGGACAAAGGGCTAAC
Downstream 100 bases:
>100_bases GCATTACCTGTGGCGAACGTGCTCGCCACAGGATGACAACAATGCTTAATGTTTCACCGCCAACTCCACCAAATGGTCTT CAACCTCCTGGGGTTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPTCSAFQVFCPFMPNQTIKTPCVGLCSTVYGDLVCRGCKRFHHEVIHWNGYNEEEKRAVWLRLEQLLSQVMASKVEVFD PARLRLQLEQRKIRFVPHQSEYCWAYQLIARGARVIINLEAYGMVLLPEFRDWNLPELRDAIDREFFLLSEAHYQRYIAP GFLKDALGD
Sequences:
>Translated_169_residues MPTCSAFQVFCPFMPNQTIKTPCVGLCSTVYGDLVCRGCKRFHHEVIHWNGYNEEEKRAVWLRLEQLLSQVMASKVEVFD PARLRLQLEQRKIRFVPHQSEYCWAYQLIARGARVIINLEAYGMVLLPEFRDWNLPELRDAIDREFFLLSEAHYQRYIAP GFLKDALGD >Mature_168_residues PTCSAFQVFCPFMPNQTIKTPCVGLCSTVYGDLVCRGCKRFHHEVIHWNGYNEEEKRAVWLRLEQLLSQVMASKVEVFDP ARLRLQLEQRKIRFVPHQSEYCWAYQLIARGARVIINLEAYGMVLLPEFRDWNLPELRDAIDREFFLLSEAHYQRYIAPG FLKDALGD
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19828; Mature: 19697
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTCSAFQVFCPFMPNQTIKTPCVGLCSTVYGDLVCRGCKRFHHEVIHWNGYNEEEKRAV CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH WLRLEQLLSQVMASKVEVFDPARLRLQLEQRKIRFVPHQSEYCWAYQLIARGARVIINLE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEEEE AYGMVLLPEFRDWNLPELRDAIDREFFLLSEAHYQRYIAPGFLKDALGD CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure PTCSAFQVFCPFMPNQTIKTPCVGLCSTVYGDLVCRGCKRFHHEVIHWNGYNEEEKRAV CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH WLRLEQLLSQVMASKVEVFDPARLRLQLEQRKIRFVPHQSEYCWAYQLIARGARVIINLE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEEEE AYGMVLLPEFRDWNLPELRDAIDREFFLLSEAHYQRYIAPGFLKDALGD CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA