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The map label for this gene is ydeP [C]

Identifier: 77459609

GI number: 77459609

Start: 3862055

End: 3864379

Strand: Reverse

Name: ydeP [C]

Synonym: Pfl01_3387

Alternate gene names: 77459609

Gene position: 3864379-3862055 (Counterclockwise)

Preceding gene: 77459612

Following gene: 77459608

Centisome position: 60.02

GC content: 62.67

Gene sequence:

>2325_bases
ATGTCACAAGTCGACCGTTACAAACCCTACAAGGGCGCCGCTGCGGGTTGGGGCGCTGTCATCAGCCTCACCAAGAACTG
GCTGGGCAGTGAAAACGCCCTGAAAAACATCCGCGCCATGCTCAAGACCAACCAGAACGGCGGCTTTGACTGCCCAGGTT
GTGCCTGGGGTGAAGCGCCCGGTGCGAGCATGCTGAAGTTCTGCGAGAACGGCGCCAAAGCGGTGAACTGGGAAGCCACC
GGCCGCCTGGTCGATCCGGCGTTCTTCAACAAGTACACAGTCTCGACCCTGGCCGAGCAAAGCGATTACTGGCTCGAATA
CCAAGGCCGGATCACACATCCGATGCGCTACGACGCGCGGGTCGACCGCTATGTCGAAACCACCTGGGACGACGCCTTCG
CGCTGATCGCCAAGCACCTCAAAGGCTTGAAATCGCCCCACGAGGCCGAGTTCTACACCTCGGGTCGCGCCAGCAACGAA
GCGGCGTTTCTCTACCAGTTGTTCGTTCGCGCCTACGGCACCAACAACTTCCCGGACTGCTCGAACATGTGCCACGAAGC
CAGTGCGGTGAGCATGGGCGAGAGCCTCGGCGTCGGCAAAGGCACGGTGGTCTATGAAGACCTGCACCACGCCGATGCGA
TTTTCGTCATCGGCCAGAACCCCGGCACCAACCACCCGCGCATGCTCGAACCGCTGCGAGAAGCGGTGAAGCGCGGCGCG
CAAGTGGTGTGCATCAACCCGCTCAAAGAGCGTGGACTGGAGCGTTTCCAGAACCCGCAAAACCCGATCGAGATGCTCAG
CAACGGCTGGGAAGCGACCAACACCGCGTACTTCCGTCCTGCCTTGGGCGGTGACATGGCGATGATTCGCGGCATGGCCA
AGTTCCTGCTGGAGTGGGAGCGCGAAGCCCAGGCCACCGGCGGCGAACCGGTGTTCGATCACGCCTTCATTGCCGAGCAC
ACCTCGGGTCTCGACAGCTATCTGGCCGAAGTCGATGCCACGAGCTGGGAGCACATCGTCGAGCAGTCCGGCGTGCCGCT
GCATGACATCGAACTGGCAGCGCGCATGTACGCCCGGGCCAAGAGCGTGATCATGTGCTGGGCCATGGGCCTGACCCAGC
ACGTGCACTCGGTGCCGACCCTGCAGGAGGTCATCAACCTGCAACTGCTGCGCGGCAACGTCGGCCGTCCGGGCGCCGGG
CTGTCGCCGGTGCGCGGCCACAGTAACGTGCAGGGCGACCGCACCATGGGCATCAACGAACTGGCCCCGACCGAGCTGAT
GGACGCCCTGGAAAAACGCTTCAACTTCAAAGTGCCGCGGATGCACGGCCACAACACGGTCATGGCGATTGGTGCCATGG
AACGTGGCGAAGCCAAGGTGTTTATCGGGCTCGGCGGCAACTTCGCCCAAGCCACGCCGGACACCCCGCGCACCCACGCC
GCGATGCGCAAACTCGACCTGAGCGTGCACATCTCGACCAAACTCAACCGCAGCCATCTGGTGACCGGGCGTGATGCGCT
GATCCTGCCGTGCCTGGGCCGTACCGACATCGACGTACAGGCCGAAGGTCCGCAAGGCGTGACCGTGGAAGACACCTTCA
GCATGGTGCACTTGTCGTTCGGCCAACTGAAACCGAAGTCGGCGCATCTGAAATCCGAGCCGGCGATTATTGCCGGGATT
GCCGCCGCCACGTTGGGCAAACACCCGATCGACTGGGAATGGGCGGTGGGCGACTACGGGCGTATCCGCAACCTGATCGC
CGACGTGATTCCGGGCTTCGAGAATTTCAACGAGAAGCTGCTGACCCCCGGTGGTTTCCACCTCGGCAACAACGCTTCCG
ACCGGGTCTGGAAAACCGAATCCGGCAAGGCCCAGTTCACCCCGTGTGTGCTGCCGGAACATCTGATCAGCGAAGGCGTG
CGCAACCTGCCGGTCAAACCGCATCTGATCCTGCAAACCATGCGTTCCCACGATCAGTACAACACCACGCTGTACGGCCT
CGACGACCGTTATCGCGGGGTCTACGGCATGCGCGACGTGGTGTTCGCCAACGAACAGGACATCCGCCGGCTCGGTTTCG
AACCGGGGCAAAAGGTCGATCTTGTGGCGCTGTGGGACGACGAGCGCGAACGTCGGGTCAGCGGTTTTACCCTGATCGCC
TACGACATTCCTGCCGGGCAGGCTGCCGCGTATTACCCGGAAACCAATCCACTGGTGCCGCTGGAAAGTTACGGTGACCG
CACCTACACGCCGACCTCGAAATTCGTGGCGATCCGCCTCGAAGCGGCCCAGACGAGCAACCTGATCCCGTCGTCGGTGG
CCTGA

Upstream 100 bases:

>100_bases
CCCGTCAAACGAAACGACCGCTTTTTTAACTTGAAAGTCAGTCGTCGCTGTTTAAACCCGATCAGGTTTTTGCCTGTGTG
CATCGTCATGGAGAAGTCCC

Downstream 100 bases:

>100_bases
CCGACCCACGCGATCCAACCCTTCTGCAATTTGACTGGCTGCAGGCGTTCGCGCCTGGCGGTGGCCCGGCCGTGTGCTGC
CGCTTTTCAGCCTTGATGAG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MSQVDRYKPYKGAAAGWGAVISLTKNWLGSENALKNIRAMLKTNQNGGFDCPGCAWGEAPGASMLKFCENGAKAVNWEAT
GRLVDPAFFNKYTVSTLAEQSDYWLEYQGRITHPMRYDARVDRYVETTWDDAFALIAKHLKGLKSPHEAEFYTSGRASNE
AAFLYQLFVRAYGTNNFPDCSNMCHEASAVSMGESLGVGKGTVVYEDLHHADAIFVIGQNPGTNHPRMLEPLREAVKRGA
QVVCINPLKERGLERFQNPQNPIEMLSNGWEATNTAYFRPALGGDMAMIRGMAKFLLEWEREAQATGGEPVFDHAFIAEH
TSGLDSYLAEVDATSWEHIVEQSGVPLHDIELAARMYARAKSVIMCWAMGLTQHVHSVPTLQEVINLQLLRGNVGRPGAG
LSPVRGHSNVQGDRTMGINELAPTELMDALEKRFNFKVPRMHGHNTVMAIGAMERGEAKVFIGLGGNFAQATPDTPRTHA
AMRKLDLSVHISTKLNRSHLVTGRDALILPCLGRTDIDVQAEGPQGVTVEDTFSMVHLSFGQLKPKSAHLKSEPAIIAGI
AAATLGKHPIDWEWAVGDYGRIRNLIADVIPGFENFNEKLLTPGGFHLGNNASDRVWKTESGKAQFTPCVLPEHLISEGV
RNLPVKPHLILQTMRSHDQYNTTLYGLDDRYRGVYGMRDVVFANEQDIRRLGFEPGQKVDLVALWDDERERRVSGFTLIA
YDIPAGQAAAYYPETNPLVPLESYGDRTYTPTSKFVAIRLEAAQTSNLIPSSVA

Sequences:

>Translated_774_residues
MSQVDRYKPYKGAAAGWGAVISLTKNWLGSENALKNIRAMLKTNQNGGFDCPGCAWGEAPGASMLKFCENGAKAVNWEAT
GRLVDPAFFNKYTVSTLAEQSDYWLEYQGRITHPMRYDARVDRYVETTWDDAFALIAKHLKGLKSPHEAEFYTSGRASNE
AAFLYQLFVRAYGTNNFPDCSNMCHEASAVSMGESLGVGKGTVVYEDLHHADAIFVIGQNPGTNHPRMLEPLREAVKRGA
QVVCINPLKERGLERFQNPQNPIEMLSNGWEATNTAYFRPALGGDMAMIRGMAKFLLEWEREAQATGGEPVFDHAFIAEH
TSGLDSYLAEVDATSWEHIVEQSGVPLHDIELAARMYARAKSVIMCWAMGLTQHVHSVPTLQEVINLQLLRGNVGRPGAG
LSPVRGHSNVQGDRTMGINELAPTELMDALEKRFNFKVPRMHGHNTVMAIGAMERGEAKVFIGLGGNFAQATPDTPRTHA
AMRKLDLSVHISTKLNRSHLVTGRDALILPCLGRTDIDVQAEGPQGVTVEDTFSMVHLSFGQLKPKSAHLKSEPAIIAGI
AAATLGKHPIDWEWAVGDYGRIRNLIADVIPGFENFNEKLLTPGGFHLGNNASDRVWKTESGKAQFTPCVLPEHLISEGV
RNLPVKPHLILQTMRSHDQYNTTLYGLDDRYRGVYGMRDVVFANEQDIRRLGFEPGQKVDLVALWDDERERRVSGFTLIA
YDIPAGQAAAYYPETNPLVPLESYGDRTYTPTSKFVAIRLEAAQTSNLIPSSVA
>Mature_773_residues
SQVDRYKPYKGAAAGWGAVISLTKNWLGSENALKNIRAMLKTNQNGGFDCPGCAWGEAPGASMLKFCENGAKAVNWEATG
RLVDPAFFNKYTVSTLAEQSDYWLEYQGRITHPMRYDARVDRYVETTWDDAFALIAKHLKGLKSPHEAEFYTSGRASNEA
AFLYQLFVRAYGTNNFPDCSNMCHEASAVSMGESLGVGKGTVVYEDLHHADAIFVIGQNPGTNHPRMLEPLREAVKRGAQ
VVCINPLKERGLERFQNPQNPIEMLSNGWEATNTAYFRPALGGDMAMIRGMAKFLLEWEREAQATGGEPVFDHAFIAEHT
SGLDSYLAEVDATSWEHIVEQSGVPLHDIELAARMYARAKSVIMCWAMGLTQHVHSVPTLQEVINLQLLRGNVGRPGAGL
SPVRGHSNVQGDRTMGINELAPTELMDALEKRFNFKVPRMHGHNTVMAIGAMERGEAKVFIGLGGNFAQATPDTPRTHAA
MRKLDLSVHISTKLNRSHLVTGRDALILPCLGRTDIDVQAEGPQGVTVEDTFSMVHLSFGQLKPKSAHLKSEPAIIAGIA
AATLGKHPIDWEWAVGDYGRIRNLIADVIPGFENFNEKLLTPGGFHLGNNASDRVWKTESGKAQFTPCVLPEHLISEGVR
NLPVKPHLILQTMRSHDQYNTTLYGLDDRYRGVYGMRDVVFANEQDIRRLGFEPGQKVDLVALWDDERERRVSGFTLIAY
DIPAGQAAAYYPETNPLVPLESYGDRTYTPTSKFVAIRLEAAQTSNLIPSSVA

Specific function: Unknown

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=761, Percent_Identity=45.9921156373193, Blast_Score=711, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=315, Percent_Identity=30.7936507936508, Blast_Score=153, Evalue=5e-38,
Organism=Escherichia coli, GI1788534, Length=458, Percent_Identity=23.7991266375546, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 85496; Mature: 85365

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVDRYKPYKGAAAGWGAVISLTKNWLGSENALKNIRAMLKTNQNGGFDCPGCAWGEAP
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GASMLKFCENGAKAVNWEATGRLVDPAFFNKYTVSTLAEQSDYWLEYQGRITHPMRYDAR
CHHHHHHHHCCCCEEEECCCCCEECHHHHCHHHHHHHHCCCCCEEEECCCCCCCEECCHH
VDRYVETTWDDAFALIAKHLKGLKSPHEAEFYTSGRASNEAAFLYQLFVRAYGTNNFPDC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCH
SNMCHEASAVSMGESLGVGKGTVVYEDLHHADAIFVIGQNPGTNHPRMLEPLREAVKRGA
HHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC
QVVCINPLKERGLERFQNPQNPIEMLSNGWEATNTAYFRPALGGDMAMIRGMAKFLLEWE
EEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
REAQATGGEPVFDHAFIAEHTSGLDSYLAEVDATSWEHIVEQSGVPLHDIELAARMYARA
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
KSVIMCWAMGLTQHVHSVPTLQEVINLQLLRGNVGRPGAGLSPVRGHSNVQGDRTMGINE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LAPTELMDALEKRFNFKVPRMHGHNTVMAIGAMERGEAKVFIGLGGNFAQATPDTPRTHA
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHH
AMRKLDLSVHISTKLNRSHLVTGRDALILPCLGRTDIDVQAEGPQGVTVEDTFSMVHLSF
HHHHHEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEEEECCCCCCEEHHHHHEEEEHH
GQLKPKSAHLKSEPAIIAGIAAATLGKHPIDWEWAVGDYGRIRNLIADVIPGFENFNEKL
HCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCHHHCCHHH
LTPGGFHLGNNASDRVWKTESGKAQFTPCVLPEHLISEGVRNLPVKPHLILQTMRSHDQY
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
NTTLYGLDDRYRGVYGMRDVVFANEQDIRRLGFEPGQKVDLVALWDDERERRVSGFTLIA
CCEEEECCHHHCCCCCCHHEEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCEEEEE
YDIPAGQAAAYYPETNPLVPLESYGDRTYTPTSKFVAIRLEAAQTSNLIPSSVA
EECCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEEEECHHCCCCCCCCCC
>Mature Secondary Structure 
SQVDRYKPYKGAAAGWGAVISLTKNWLGSENALKNIRAMLKTNQNGGFDCPGCAWGEAP
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GASMLKFCENGAKAVNWEATGRLVDPAFFNKYTVSTLAEQSDYWLEYQGRITHPMRYDAR
CHHHHHHHHCCCCEEEECCCCCEECHHHHCHHHHHHHHCCCCCEEEECCCCCCCEECCHH
VDRYVETTWDDAFALIAKHLKGLKSPHEAEFYTSGRASNEAAFLYQLFVRAYGTNNFPDC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCH
SNMCHEASAVSMGESLGVGKGTVVYEDLHHADAIFVIGQNPGTNHPRMLEPLREAVKRGA
HHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC
QVVCINPLKERGLERFQNPQNPIEMLSNGWEATNTAYFRPALGGDMAMIRGMAKFLLEWE
EEEEECCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
REAQATGGEPVFDHAFIAEHTSGLDSYLAEVDATSWEHIVEQSGVPLHDIELAARMYARA
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
KSVIMCWAMGLTQHVHSVPTLQEVINLQLLRGNVGRPGAGLSPVRGHSNVQGDRTMGINE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LAPTELMDALEKRFNFKVPRMHGHNTVMAIGAMERGEAKVFIGLGGNFAQATPDTPRTHA
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHH
AMRKLDLSVHISTKLNRSHLVTGRDALILPCLGRTDIDVQAEGPQGVTVEDTFSMVHLSF
HHHHHEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEEEECCCCCCEEHHHHHEEEEHH
GQLKPKSAHLKSEPAIIAGIAAATLGKHPIDWEWAVGDYGRIRNLIADVIPGFENFNEKL
HCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCHHHCCHHH
LTPGGFHLGNNASDRVWKTESGKAQFTPCVLPEHLISEGVRNLPVKPHLILQTMRSHDQY
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
NTTLYGLDDRYRGVYGMRDVVFANEQDIRRLGFEPGQKVDLVALWDDERERRVSGFTLIA
CCEEEECCHHHCCCCCCHHEEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCEEEEE
YDIPAGQAAAYYPETNPLVPLESYGDRTYTPTSKFVAIRLEAAQTSNLIPSSVA
EECCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEEEECHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]