Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yebQ [H]

Identifier: 77459603

GI number: 77459603

Start: 3855112

End: 3856512

Strand: Reverse

Name: yebQ [H]

Synonym: Pfl01_3381

Alternate gene names: 77459603

Gene position: 3856512-3855112 (Counterclockwise)

Preceding gene: 77459605

Following gene: 77459598

Centisome position: 59.9

GC content: 64.03

Gene sequence:

>1401_bases
ATGCACCGAGAACCCCTGAGCCCTTCAGCCCGCTGGGCGCTGATCAGTCTGGCGCTGTCGATGCTCATGCCATCGCTCGA
TACCAGCATCGCCAACGCCGGATTGCCCACGCTGGCGGCGGCGTTCGATGCGACGTTTCAACAGGTGCAATGGATCGTGC
TGGCCTACCTGCTGGCGGTCACTACCTTGATTGTCAGCGTCGGGCGGTTGGGTGACGGCTTCGGTCGGCGGCGCTTGTTG
TTGATCGGCATCGGCATTTTTACCGCCGCTTCGCTGGTCTGCGCACTGGCGCCGAGCCTCGCCTGGCTGATCGGTGCGCG
GGCGGTGCAAGGGCTTGGCGCGGCAATCATGTTTGCGCTGACGGTGGCGCTGGTGGCCGATGCGGTGCCCAAATCCCGGG
CCGGCAGTGCGATGGGGTTGCTGGCCACGATGTCGGCCACCGGCACCACCCTCGGGCCGTCGCTCGGTGGGCTGTTGATG
GCGCATGTCGGCTGGCAGTCGGTTTTTGTGATCAACGTGCCGTTGGGATTGCTCAATGCGTGGCTGGTGTATCGCTATCT
GCCGAAGGATCGTAGCGTGCGCTCGGGTGTTGCATTTGATTATCCCGGCACCGCCGTATTGATGCTGACGCTGGCGGCCT
ATGCACTGGCGATGACGGTTGATGGATTCACCCCGACGTTGCTGTTGCTCAGCCTGTTGGGCGTGGGGTTGTTCATCCTG
GTCGAGAAACGGAGCAAGGCGCCGCTGATTCACCTCTCTTTGTTCACCGACACGCGAATCAGCAGCAGTCTGGCGCTGAC
CTTGCTGGTCACGACGGTGATGATGACCACGCTGGTGGTCGGGCCGTTTTACCTGAGTCGAGGTTTGGGTCTTTCCAGCA
CTCAGGTCGGTCTGGCGTTGTCGATCGGGCCGTTGCTGGCGGCATTCAGCGGCGTGCCGGCCGGGCGGCTGGTGGATCGT
TTCGGCGCGCGGCGGATGGTGCCGGGTGCGTTGTTCGGCCTGGCTTGCGGGTGTGGTCTCTTGGCGCTGTTTCCGGTGAG
TTTCGGAGTGCTTGCATACGTGCTGCCGATCACGGTGGTGGCCTTGAGTTACGCGCTGTTCCAGGCCGCCAACAACAGCG
GGTTGATGTCCGGCGTTGCTCAGGATCAGCGCGGTGTGGTCTCGGCCATGCTCGGGCTGTCGCGCAATCTGGGCTTGATC
ACCGGGGCGGCGGCGATGGGCGCGGTGTTTGCACTGGCGACGGACGATCCGACTGAGGCGCCGGCCGCGGTCATCGCAGG
CGGCTTGCACATGACCTTCGGTGTGGCTACGGCGTTGATGTTCGCGGCGTCTGCGCTCGGCGCCTTCACGCACCTGCGTC
TCGCGTCTCCCGTGCCGGAAAGAACAGTTCAAAGCAGGTGA

Upstream 100 bases:

>100_bases
ATGGCGTTCCATGCAGGTATCAAGTGCAAAGCATGCGTCTTGCGCCTTGTATTGTCGAGGCTCAGGCTATGTCGCATGAC
CTTTGCCCTGTGAGCCCCCC

Downstream 100 bases:

>100_bases
TGCCATCAGCGCTGCTGACGCTGTAACGGCCCTGATGCAACTGCATGATGGTCGCGACAATCGACAGGCCCAAGCCGTTG
GACTGGGCCGAGCGCTCGCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MHREPLSPSARWALISLALSMLMPSLDTSIANAGLPTLAAAFDATFQQVQWIVLAYLLAVTTLIVSVGRLGDGFGRRRLL
LIGIGIFTAASLVCALAPSLAWLIGARAVQGLGAAIMFALTVALVADAVPKSRAGSAMGLLATMSATGTTLGPSLGGLLM
AHVGWQSVFVINVPLGLLNAWLVYRYLPKDRSVRSGVAFDYPGTAVLMLTLAAYALAMTVDGFTPTLLLLSLLGVGLFIL
VEKRSKAPLIHLSLFTDTRISSSLALTLLVTTVMMTTLVVGPFYLSRGLGLSSTQVGLALSIGPLLAAFSGVPAGRLVDR
FGARRMVPGALFGLACGCGLLALFPVSFGVLAYVLPITVVALSYALFQAANNSGLMSGVAQDQRGVVSAMLGLSRNLGLI
TGAAAMGAVFALATDDPTEAPAAVIAGGLHMTFGVATALMFAASALGAFTHLRLASPVPERTVQSR

Sequences:

>Translated_466_residues
MHREPLSPSARWALISLALSMLMPSLDTSIANAGLPTLAAAFDATFQQVQWIVLAYLLAVTTLIVSVGRLGDGFGRRRLL
LIGIGIFTAASLVCALAPSLAWLIGARAVQGLGAAIMFALTVALVADAVPKSRAGSAMGLLATMSATGTTLGPSLGGLLM
AHVGWQSVFVINVPLGLLNAWLVYRYLPKDRSVRSGVAFDYPGTAVLMLTLAAYALAMTVDGFTPTLLLLSLLGVGLFIL
VEKRSKAPLIHLSLFTDTRISSSLALTLLVTTVMMTTLVVGPFYLSRGLGLSSTQVGLALSIGPLLAAFSGVPAGRLVDR
FGARRMVPGALFGLACGCGLLALFPVSFGVLAYVLPITVVALSYALFQAANNSGLMSGVAQDQRGVVSAMLGLSRNLGLI
TGAAAMGAVFALATDDPTEAPAAVIAGGLHMTFGVATALMFAASALGAFTHLRLASPVPERTVQSR
>Mature_466_residues
MHREPLSPSARWALISLALSMLMPSLDTSIANAGLPTLAAAFDATFQQVQWIVLAYLLAVTTLIVSVGRLGDGFGRRRLL
LIGIGIFTAASLVCALAPSLAWLIGARAVQGLGAAIMFALTVALVADAVPKSRAGSAMGLLATMSATGTTLGPSLGGLLM
AHVGWQSVFVINVPLGLLNAWLVYRYLPKDRSVRSGVAFDYPGTAVLMLTLAAYALAMTVDGFTPTLLLLSLLGVGLFIL
VEKRSKAPLIHLSLFTDTRISSSLALTLLVTTVMMTTLVVGPFYLSRGLGLSSTQVGLALSIGPLLAAFSGVPAGRLVDR
FGARRMVPGALFGLACGCGLLALFPVSFGVLAYVLPITVVALSYALFQAANNSGLMSGVAQDQRGVVSAMLGLSRNLGLI
TGAAAMGAVFALATDDPTEAPAAVIAGGLHMTFGVATALMFAASALGAFTHLRLASPVPERTVQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=418, Percent_Identity=31.8181818181818, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1790195, Length=439, Percent_Identity=25.9681093394077, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1788392, Length=345, Percent_Identity=29.8550724637681, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1789042, Length=372, Percent_Identity=23.6559139784946, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788710, Length=332, Percent_Identity=27.710843373494, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1790146, Length=161, Percent_Identity=29.8136645962733, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6319770, Length=299, Percent_Identity=26.4214046822742, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323735, Length=301, Percent_Identity=27.5747508305648, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=29.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322958, Length=175, Percent_Identity=29.7142857142857, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6325455, Length=131, Percent_Identity=30.5343511450382, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6324264, Length=165, Percent_Identity=29.0909090909091, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48070; Mature: 48070

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHREPLSPSARWALISLALSMLMPSLDTSIANAGLPTLAAAFDATFQQVQWIVLAYLLAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TTLIVSVGRLGDGFGRRRLLLIGIGIFTAASLVCALAPSLAWLIGARAVQGLGAAIMFAL
HHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVALVADAVPKSRAGSAMGLLATMSATGTTLGPSLGGLLMAHVGWQSVFVINVPLGLLNA
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHH
WLVYRYLPKDRSVRSGVAFDYPGTAVLMLTLAAYALAMTVDGFTPTLLLLSLLGVGLFIL
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE
VEKRSKAPLIHLSLFTDTRISSSLALTLLVTTVMMTTLVVGPFYLSRGLGLSSTQVGLAL
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
SIGPLLAAFSGVPAGRLVDRFGARRMVPGALFGLACGCGLLALFPVSFGVLAYVLPITVV
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSYALFQAANNSGLMSGVAQDQRGVVSAMLGLSRNLGLITGAAAMGAVFALATDDPTEA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHEEEEECCCCCCC
PAAVIAGGLHMTFGVATALMFAASALGAFTHLRLASPVPERTVQSR
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MHREPLSPSARWALISLALSMLMPSLDTSIANAGLPTLAAAFDATFQQVQWIVLAYLLAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TTLIVSVGRLGDGFGRRRLLLIGIGIFTAASLVCALAPSLAWLIGARAVQGLGAAIMFAL
HHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVALVADAVPKSRAGSAMGLLATMSATGTTLGPSLGGLLMAHVGWQSVFVINVPLGLLNA
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHH
WLVYRYLPKDRSVRSGVAFDYPGTAVLMLTLAAYALAMTVDGFTPTLLLLSLLGVGLFIL
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEE
VEKRSKAPLIHLSLFTDTRISSSLALTLLVTTVMMTTLVVGPFYLSRGLGLSSTQVGLAL
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
SIGPLLAAFSGVPAGRLVDRFGARRMVPGALFGLACGCGLLALFPVSFGVLAYVLPITVV
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSYALFQAANNSGLMSGVAQDQRGVVSAMLGLSRNLGLITGAAAMGAVFALATDDPTEA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHEEEEECCCCCCC
PAAVIAGGLHMTFGVATALMFAASALGAFTHLRLASPVPERTVQSR
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]