| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459502
Identifier: 77459502
GI number: 77459502
Start: 3763069
End: 3764292
Strand: Reverse
Name: 77459502
Synonym: Pfl01_3280
Alternate gene names: NA
Gene position: 3764292-3763069 (Counterclockwise)
Preceding gene: 77459503
Following gene: 77459500
Centisome position: 58.47
GC content: 61.76
Gene sequence:
>1224_bases ATGTGGCCGCTTTCGGGCGGTCGCATCGATCAACCTTTCGATTGCGATACCTCCATGACGATTGCGGTTCCCCGTTCTGC CCCCTCGGCGACTGGCCGGTTGCTGTCCATTGATGCGCTGCGTGGCCTGGTGATTCTGTTCATGTTGCTGGACCACGTGC GCGAAACCTTTCTGCTGCATCGTCAGGTCTCCGACCCGATGGACATCGCCATCACCGAGCCGGCGCTGTTCTTCAGCCGT ACCCTGGCGCATCTGTGCGCGCCGGTGTTCGTGCTGCTGACCGGGTTGTCGGCGTGGCTGTTCGGCGAGAAGTACGACGG CAAGGCTGACGTCAGTGCCTTCCTGTTCAAGCGCGGACTGTTTCTGGTCGCGCTCGAATTCACTCTGGTGAATTTCGCCT GGACGTTCCAGTTGCCACCGACCGTGATCTACCTGCAAGTGATATGGGCGATCGGCCTGAGCATGATCGCGTTGTCGCTG CTGGTCTGGCTGCCACGCTGGCTGTTGTTGACGCTGAGCCTGACGATCATCGCCGGGCACAACCTGCTCGACGGACTGCA CTTCGCAACCGAGTCAGCGCTGCACGTGCCGTGGGCAATCCTGCATGACCGCGGCTGGATCGAGGCGGGCGAGACCTTGC GCCTGCGCACCTCGTACCCGTTGCTGCCGTGGATCGGCGTGATCGGGCTGGGTTACGCGCTGGGGCCGTGGTTCGCTCGC GCAGCCGATGCCGGCGTGCGCCAGCGCCGTTTATTGATCGGTGGTGTCGCCGGGCTGCTGGGCTTTGTGGCACTGCGGCT GGTCAACGGTTACGGCGAGAAACCCTGGGCCTTGGGTGACAGCGGTGTGCAAACCCTGATGAGCTTTTTCAACATCACCA AATACCCACCGTCGCTGTTGTTCATCACGTTGACGGTGAGCGTCGGGCTGCTGCTGTTGCTGGTGTTCGAGCGCGCGCAG GATCGACGCTTGATTCGCTGGCTGACGGTGTTCGGTTCGGCACCGATGTTTTTTTACCTGCTGCACTTGTATGCGCTGAA GGTGCTGTACCTGATCGGCGTGGCGCTGTTCGGGCTCAATCAGGGCACCTATTTCGGTTTCTCGTCGGTGACGGCGGTGT GGCTGGCGGCGATGGTGCTGGCGGTCGCGTTGTTCCCGGCCGTGCGCTGGTTTTCGGCATTGAAGGCCCGGCGTCGCGAC ATTGCCTGGTTGAAGTATTTGTAA
Upstream 100 bases:
>100_bases CCGTTGCAGGTCGTGCTGGAAATCCTGCGTACAGCGTAATCGCTGTTTGAGAACCGCTAGCGATTGGATCGGTTTTTCAT GTTATAAGGTAACGCAAATT
Downstream 100 bases:
>100_bases AGCGGCTTAGCCCGTTTTGCCTTCGCTGGCATTGCGGGCGAAATCGATAAACGCCTTGAGCGGTGCCGGCACGTGGCGCC GACTCGGGTAATACAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MWPLSGGRIDQPFDCDTSMTIAVPRSAPSATGRLLSIDALRGLVILFMLLDHVRETFLLHRQVSDPMDIAITEPALFFSR TLAHLCAPVFVLLTGLSAWLFGEKYDGKADVSAFLFKRGLFLVALEFTLVNFAWTFQLPPTVIYLQVIWAIGLSMIALSL LVWLPRWLLLTLSLTIIAGHNLLDGLHFATESALHVPWAILHDRGWIEAGETLRLRTSYPLLPWIGVIGLGYALGPWFAR AADAGVRQRRLLIGGVAGLLGFVALRLVNGYGEKPWALGDSGVQTLMSFFNITKYPPSLLFITLTVSVGLLLLLVFERAQ DRRLIRWLTVFGSAPMFFYLLHLYALKVLYLIGVALFGLNQGTYFGFSSVTAVWLAAMVLAVALFPAVRWFSALKARRRD IAWLKYL
Sequences:
>Translated_407_residues MWPLSGGRIDQPFDCDTSMTIAVPRSAPSATGRLLSIDALRGLVILFMLLDHVRETFLLHRQVSDPMDIAITEPALFFSR TLAHLCAPVFVLLTGLSAWLFGEKYDGKADVSAFLFKRGLFLVALEFTLVNFAWTFQLPPTVIYLQVIWAIGLSMIALSL LVWLPRWLLLTLSLTIIAGHNLLDGLHFATESALHVPWAILHDRGWIEAGETLRLRTSYPLLPWIGVIGLGYALGPWFAR AADAGVRQRRLLIGGVAGLLGFVALRLVNGYGEKPWALGDSGVQTLMSFFNITKYPPSLLFITLTVSVGLLLLLVFERAQ DRRLIRWLTVFGSAPMFFYLLHLYALKVLYLIGVALFGLNQGTYFGFSSVTAVWLAAMVLAVALFPAVRWFSALKARRRD IAWLKYL >Mature_407_residues MWPLSGGRIDQPFDCDTSMTIAVPRSAPSATGRLLSIDALRGLVILFMLLDHVRETFLLHRQVSDPMDIAITEPALFFSR TLAHLCAPVFVLLTGLSAWLFGEKYDGKADVSAFLFKRGLFLVALEFTLVNFAWTFQLPPTVIYLQVIWAIGLSMIALSL LVWLPRWLLLTLSLTIIAGHNLLDGLHFATESALHVPWAILHDRGWIEAGETLRLRTSYPLLPWIGVIGLGYALGPWFAR AADAGVRQRRLLIGGVAGLLGFVALRLVNGYGEKPWALGDSGVQTLMSFFNITKYPPSLLFITLTVSVGLLLLLVFERAQ DRRLIRWLTVFGSAPMFFYLLHLYALKVLYLIGVALFGLNQGTYFGFSSVTAVWLAAMVLAVALFPAVRWFSALKARRRD IAWLKYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45397; Mature: 45397
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPLSGGRIDQPFDCDTSMTIAVPRSAPSATGRLLSIDALRGLVILFMLLDHVRETFLLH CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RQVSDPMDIAITEPALFFSRTLAHLCAPVFVLLTGLSAWLFGEKYDGKADVSAFLFKRGL HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH FLVALEFTLVNFAWTFQLPPTVIYLQVIWAIGLSMIALSLLVWLPRWLLLTLSLTIIAGH HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLLDGLHFATESALHVPWAILHDRGWIEAGETLRLRTSYPLLPWIGVIGLGYALGPWFAR HHHHHHHHHHCCHHHCCHHHEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AADAGVRQRRLLIGGVAGLLGFVALRLVNGYGEKPWALGDSGVQTLMSFFNITKYPPSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH FITLTVSVGLLLLLVFERAQDRRLIRWLTVFGSAPMFFYLLHLYALKVLYLIGVALFGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC QGTYFGFSSVTAVWLAAMVLAVALFPAVRWFSALKARRRDIAWLKYL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWPLSGGRIDQPFDCDTSMTIAVPRSAPSATGRLLSIDALRGLVILFMLLDHVRETFLLH CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RQVSDPMDIAITEPALFFSRTLAHLCAPVFVLLTGLSAWLFGEKYDGKADVSAFLFKRGL HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH FLVALEFTLVNFAWTFQLPPTVIYLQVIWAIGLSMIALSLLVWLPRWLLLTLSLTIIAGH HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLLDGLHFATESALHVPWAILHDRGWIEAGETLRLRTSYPLLPWIGVIGLGYALGPWFAR HHHHHHHHHHCCHHHCCHHHEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AADAGVRQRRLLIGGVAGLLGFVALRLVNGYGEKPWALGDSGVQTLMSFFNITKYPPSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH FITLTVSVGLLLLLVFERAQDRRLIRWLTVFGSAPMFFYLLHLYALKVLYLIGVALFGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC QGTYFGFSSVTAVWLAAMVLAVALFPAVRWFSALKARRRDIAWLKYL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA