| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ppx [H]
Identifier: 77459469
GI number: 77459469
Start: 3727380
End: 3728315
Strand: Direct
Name: ppx [H]
Synonym: Pfl01_3247
Alternate gene names: 77459469
Gene position: 3727380-3728315 (Clockwise)
Preceding gene: 77459466
Following gene: 77459470
Centisome position: 57.89
GC content: 63.25
Gene sequence:
>936_bases ATGAAAGAAGACACCTCGCTGTTTGCCGCCATCGACCTCGGTTCCAATGCCTTTCGCATGATGATCGGCCAGTCGGTACG CAGCAGAAAGGGCTTCATGATCCAGGAGGTCAAAACCTTGCGTGAGCCGGTGCGGCTGGCGGAAGGCTTCGACGGTCGGG CGCTCGACGAAATGGCACTGGATCGCGGCTGGCAGGCGCTGGCGCGGTTCGGCAAGAAGCTGCGCGGTTTCGAGCCCGGT CGCGTGCGCGCAGTCGCGACCAGCGCGGTGCGCGAGGCCGACAATGCGCAGCTGTTCCTGGCCAGTGCGGAGCGGCATCT GGGGTTTCGCATCGATGTGATTTCCGGGCATGAAGAAGCGCGTCTGGTCTACGCCGGTGTGGCCCACACCCTGCCGGTCG CCGATGACATGCGTCTGGTGGTCGACATTGGCGGCGGCTCCACCGAGCTGATTCTCGGCCAGGGATCACAACCGCTCCTG ACCGAAAGCATCGCCCTCGGCAGCGGCACCTTGAGCACCCGCTACTTTCGTAACGGTGAGATTTCCCCCGGCGCCCTGCA AGAAGCCGAACGCGTAGCCATCCTGCAATTCGAAAAAGTCGCCCGCCGTTATCGCGCCCAGGGCTGGCAGCAGACCATCG GCTCCTCGGGCACCGCGCGGATGCTCGCCAAAGTGCTCAAGGCCAATCGCCTGAACGATCATGGCGAGAGCGGCATCACC TACGGCGGCCTGTTGCGGCTGTCGTTACGCCTGCTGGAAGTCAGCAATGTTCAACAGCTGAAACTGGCCGGCCTGCAACC CCATCGCCAGAGCATCCTGCCCGGTGGTCTGGTGGTCATGCTGGCAGCATTCAAAGTATTCGGCATCTCGCAAATGGTGC CGTCCGAACCCGGCTTGCGGCTGGGCGTGCTGCACGGTCTGATGAGCAACCACTGA
Upstream 100 bases:
>100_bases CCGAACCGCCCTGCCCGCGTCATCAGGCTGTCATCGAACCCACGGCAGAATTCTCGCAAACCGTCCCGCGCCTCCCGACG GATGATTTGCAAGGATCCCC
Downstream 100 bases:
>100_bases GCGATTTCTGCTGCAGGATTTTCACTGCCGGATCAAGCGGTTCGTGATGGCGAAGACGCCCTTTCAATACTCGATGACGC CTGCGTATAAACCCCTGCAA
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKEDTSLFAAIDLGSNAFRMMIGQSVRSRKGFMIQEVKTLREPVRLAEGFDGRALDEMALDRGWQALARFGKKLRGFEPG RVRAVATSAVREADNAQLFLASAERHLGFRIDVISGHEEARLVYAGVAHTLPVADDMRLVVDIGGGSTELILGQGSQPLL TESIALGSGTLSTRYFRNGEISPGALQEAERVAILQFEKVARRYRAQGWQQTIGSSGTARMLAKVLKANRLNDHGESGIT YGGLLRLSLRLLEVSNVQQLKLAGLQPHRQSILPGGLVVMLAAFKVFGISQMVPSEPGLRLGVLHGLMSNH
Sequences:
>Translated_311_residues MKEDTSLFAAIDLGSNAFRMMIGQSVRSRKGFMIQEVKTLREPVRLAEGFDGRALDEMALDRGWQALARFGKKLRGFEPG RVRAVATSAVREADNAQLFLASAERHLGFRIDVISGHEEARLVYAGVAHTLPVADDMRLVVDIGGGSTELILGQGSQPLL TESIALGSGTLSTRYFRNGEISPGALQEAERVAILQFEKVARRYRAQGWQQTIGSSGTARMLAKVLKANRLNDHGESGIT YGGLLRLSLRLLEVSNVQQLKLAGLQPHRQSILPGGLVVMLAAFKVFGISQMVPSEPGLRLGVLHGLMSNH >Mature_311_residues MKEDTSLFAAIDLGSNAFRMMIGQSVRSRKGFMIQEVKTLREPVRLAEGFDGRALDEMALDRGWQALARFGKKLRGFEPG RVRAVATSAVREADNAQLFLASAERHLGFRIDVISGHEEARLVYAGVAHTLPVADDMRLVVDIGGGSTELILGQGSQPLL TESIALGSGTLSTRYFRNGEISPGALQEAERVAILQFEKVARRYRAQGWQQTIGSSGTARMLAKVLKANRLNDHGESGIT YGGLLRLSLRLLEVSNVQQLKLAGLQPHRQSILPGGLVVMLAAFKVFGISQMVPSEPGLRLGVLHGLMSNH
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=309, Percent_Identity=38.5113268608414, Blast_Score=194, Evalue=8e-51, Organism=Escherichia coli, GI1788848, Length=303, Percent_Identity=37.6237623762376, Blast_Score=177, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 33812; Mature: 33812
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEDTSLFAAIDLGSNAFRMMIGQSVRSRKGFMIQEVKTLREPVRLAEGFDGRALDEMAL CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DRGWQALARFGKKLRGFEPGRVRAVATSAVREADNAQLFLASAERHLGFRIDVISGHEEA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEEECCCCCC RLVYAGVAHTLPVADDMRLVVDIGGGSTELILGQGSQPLLTESIALGSGTLSTRYFRNGE EEEEECHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCC ISPGALQEAERVAILQFEKVARRYRAQGWQQTIGSSGTARMLAKVLKANRLNDHGESGIT CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC YGGLLRLSLRLLEVSNVQQLKLAGLQPHRQSILPGGLVVMLAAFKVFGISQMVPSEPGLR HHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCH LGVLHGLMSNH HHHHHHHHHCC >Mature Secondary Structure MKEDTSLFAAIDLGSNAFRMMIGQSVRSRKGFMIQEVKTLREPVRLAEGFDGRALDEMAL CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DRGWQALARFGKKLRGFEPGRVRAVATSAVREADNAQLFLASAERHLGFRIDVISGHEEA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEEECCCCCC RLVYAGVAHTLPVADDMRLVVDIGGGSTELILGQGSQPLLTESIALGSGTLSTRYFRNGE EEEEECHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCC ISPGALQEAERVAILQFEKVARRYRAQGWQQTIGSSGTARMLAKVLKANRLNDHGESGIT CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC YGGLLRLSLRLLEVSNVQQLKLAGLQPHRQSILPGGLVVMLAAFKVFGISQMVPSEPGLR HHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCH LGVLHGLMSNH HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]