| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459435
Identifier: 77459435
GI number: 77459435
Start: 3692425
End: 3694065
Strand: Direct
Name: 77459435
Synonym: Pfl01_3213
Alternate gene names: NA
Gene position: 3692425-3694065 (Clockwise)
Preceding gene: 77459434
Following gene: 77459438
Centisome position: 57.35
GC content: 65.63
Gene sequence:
>1641_bases ATGACCCGTTTCACCGCTCTCTTGCTGCCCCTGCTGATCTGCACGGCCACCGCCCAGGCGGCCGAGCTGACGGCCAGCGT GGATCGCAGTCGCCTGAACTCCGGCGAGACGGTCGAACTCACCCTCGAATCCAACGACGTCACGCAGTTCGGCAAACCGG ACCTGAGCCCGCTGGAGCCGCTGTTCGAAGTGCGCGGCACGCGGCAGGTCAACCAGTTGAACACCCTCAACGAAGACAAC CGCGCCACTACTCGCTGGATCATCACGTTGCTGCCCAAGCAGAACGGCAGCGTTGAAATCCCGCCGCTGAAACTGGGCGA CGTCGAGAGCCAGCCGATCACCGTACAAGTGATCGAGAGCGACACCCGCGAAGAGAACAACGCCCGCGAACCGGTGTTCA TCGAGGCCAGCCTCGACCAGACCAGCGTTTACGTGCAGGCCCAGGCCATCCTGACTTTGCGCATCTACCATTCGGTGTCG CTGTACGACGACAGCAGCCTGACGCCGTTGCAGATCGCCGATGCGCGCATCGAGCAACTGGGCGACATGCGCACTTACGA AAAAGACATCAACGGTGTGCGCCATGGCGTGATCGAGATGCGCTACGCGATCTATCCGCAGCACAGCGGCTTGCTGAGCA TCGCCCCGCAGACGTTCAGCGCCACACTGGTCGATACCCAGCCCTCGCAGGACGCCACGGCGCAGGGGCCGAAGCCGGGC AAACTGATGCACATCAGCTCCGCCGCGACTTCGCTGACGGTCAAACCCAAACCGATGACCTACCCCAGCGATGCGCCGTG GCTGCCGGCCCGCAGCCTGAGCCTGAGCGAAAGCTGGAACCCGGAGCCGGAACACACTCAGGTCGGCGACTCCCTGACCC GCAGCCTGACCCTCAAGGTCGAAGGCCTGGCCAGTTCGCAACTGCCGGCCCTGCCCGCCACCGAAGCCAACGGCCTGCGC CGCTACCCGGACCAACCGGTGCTGAACAACCAGAGCAGCGATCGCGGGCTGATCGGCAGTCGTGAAGAACGTGAAGCGCT GGTGCCGAGCCGCAGTGGCTCGATCGAATTGCCAACAGTAGACGTGGTCTGGTGGAACACCTTCGAAGATCACCTGGAAC ACACCAGCCTGCCGGCGCGCACCCTGCAAGTGGCGAACAACCCGAGCCTGCAAGTCGACACCCCGGCGGGCAACGCGCAA CCGCTCAGCGCCGCCGACAGCGAAGCCTTGTGGTGGTGGAAACTCAGCACGCTCGTTCTCGCCTGCACCACCCTGCTCGG CTTCGGCCTGTGGTGGCGTGCCCGCTGGCAACCGGCGATCCTGCGCGCCGCGCAAACCGGCCCGAGCCCGCGCACCCTGC TCGACGACATCAAACGCGCCAGCCAGGCCAACGACCCCCACGCCACCCGCCAGGCCCTCGACGCCTGGGCCCGTCAGCAG CCGGAAACACTGGCGGACATGGCGGCGCGGTTTGTGCCTCTGTCGGATGCGCTCGATGGGCTGAACGGCGCGCTGTACAG CGAGACCGGGCAGCATTGGCAGGGTGAGGATCTGTGGCGGGCGATCCGGACGATTCCGACCGCGGAGCGGGTGCAGGATC CGGTCGGGGATAGTGGGTTGCCGCCGCTTTATCCGAAGTAG
Upstream 100 bases:
>100_bases TGGAACAATGGCTGGGCAAGATCCCGGATGATCCGGGCGAACTGCTGCGACGCAAATTCTGGTACGAACAGCAACAACAT CAGGATCAGGAAAACATTCG
Downstream 100 bases:
>100_bases GGTCGCGATAAACATTAGGTCGGGGGCTGCGCTTGAAAAGCCCCTGCAAAGATTACGTAGTGGATAAATGGCTAAACTCG AGTTTTGTCCACCCGGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTRFTALLLPLLICTATAQAAELTASVDRSRLNSGETVELTLESNDVTQFGKPDLSPLEPLFEVRGTRQVNQLNTLNEDN RATTRWIITLLPKQNGSVEIPPLKLGDVESQPITVQVIESDTREENNAREPVFIEASLDQTSVYVQAQAILTLRIYHSVS LYDDSSLTPLQIADARIEQLGDMRTYEKDINGVRHGVIEMRYAIYPQHSGLLSIAPQTFSATLVDTQPSQDATAQGPKPG KLMHISSAATSLTVKPKPMTYPSDAPWLPARSLSLSESWNPEPEHTQVGDSLTRSLTLKVEGLASSQLPALPATEANGLR RYPDQPVLNNQSSDRGLIGSREEREALVPSRSGSIELPTVDVVWWNTFEDHLEHTSLPARTLQVANNPSLQVDTPAGNAQ PLSAADSEALWWWKLSTLVLACTTLLGFGLWWRARWQPAILRAAQTGPSPRTLLDDIKRASQANDPHATRQALDAWARQQ PETLADMAARFVPLSDALDGLNGALYSETGQHWQGEDLWRAIRTIPTAERVQDPVGDSGLPPLYPK
Sequences:
>Translated_546_residues MTRFTALLLPLLICTATAQAAELTASVDRSRLNSGETVELTLESNDVTQFGKPDLSPLEPLFEVRGTRQVNQLNTLNEDN RATTRWIITLLPKQNGSVEIPPLKLGDVESQPITVQVIESDTREENNAREPVFIEASLDQTSVYVQAQAILTLRIYHSVS LYDDSSLTPLQIADARIEQLGDMRTYEKDINGVRHGVIEMRYAIYPQHSGLLSIAPQTFSATLVDTQPSQDATAQGPKPG KLMHISSAATSLTVKPKPMTYPSDAPWLPARSLSLSESWNPEPEHTQVGDSLTRSLTLKVEGLASSQLPALPATEANGLR RYPDQPVLNNQSSDRGLIGSREEREALVPSRSGSIELPTVDVVWWNTFEDHLEHTSLPARTLQVANNPSLQVDTPAGNAQ PLSAADSEALWWWKLSTLVLACTTLLGFGLWWRARWQPAILRAAQTGPSPRTLLDDIKRASQANDPHATRQALDAWARQQ PETLADMAARFVPLSDALDGLNGALYSETGQHWQGEDLWRAIRTIPTAERVQDPVGDSGLPPLYPK >Mature_545_residues TRFTALLLPLLICTATAQAAELTASVDRSRLNSGETVELTLESNDVTQFGKPDLSPLEPLFEVRGTRQVNQLNTLNEDNR ATTRWIITLLPKQNGSVEIPPLKLGDVESQPITVQVIESDTREENNAREPVFIEASLDQTSVYVQAQAILTLRIYHSVSL YDDSSLTPLQIADARIEQLGDMRTYEKDINGVRHGVIEMRYAIYPQHSGLLSIAPQTFSATLVDTQPSQDATAQGPKPGK LMHISSAATSLTVKPKPMTYPSDAPWLPARSLSLSESWNPEPEHTQVGDSLTRSLTLKVEGLASSQLPALPATEANGLRR YPDQPVLNNQSSDRGLIGSREEREALVPSRSGSIELPTVDVVWWNTFEDHLEHTSLPARTLQVANNPSLQVDTPAGNAQP LSAADSEALWWWKLSTLVLACTTLLGFGLWWRARWQPAILRAAQTGPSPRTLLDDIKRASQANDPHATRQALDAWARQQP ETLADMAARFVPLSDALDGLNGALYSETGQHWQGEDLWRAIRTIPTAERVQDPVGDSGLPPLYPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60091; Mature: 59960
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFTALLLPLLICTATAQAAELTASVDRSRLNSGETVELTLESNDVTQFGKPDLSPLEP CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHH LFEVRGTRQVNQLNTLNEDNRATTRWIITLLPKQNGSVEIPPLKLGDVESQPITVQVIES HHHHCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCCEECCCCCCCEEEEEECC DTREENNAREPVFIEASLDQTSVYVQAQAILTLRIYHSVSLYDDSSLTPLQIADARIEQL CCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH GDMRTYEKDINGVRHGVIEMRYAIYPQHSGLLSIAPQTFSATLVDTQPSQDATAQGPKPG HHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCC KLMHISSAATSLTVKPKPMTYPSDAPWLPARSLSLSESWNPEPEHTQVGDSLTRSLTLKV CEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEE EGLASSQLPALPATEANGLRRYPDQPVLNNQSSDRGLIGSREEREALVPSRSGSIELPTV ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCEE DVVWWNTFEDHLEHTSLPARTLQVANNPSLQVDTPAGNAQPLSAADSEALWWWKLSTLVL EEEEECCHHHHHHHCCCCHHEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHH ACTTLLGFGLWWRARWQPAILRAAQTGPSPRTLLDDIKRASQANDPHATRQALDAWARQQ HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC PETLADMAARFVPLSDALDGLNGALYSETGQHWQGEDLWRAIRTIPTAERVQDPVGDSGL CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC PPLYPK CCCCCC >Mature Secondary Structure TRFTALLLPLLICTATAQAAELTASVDRSRLNSGETVELTLESNDVTQFGKPDLSPLEP CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHH LFEVRGTRQVNQLNTLNEDNRATTRWIITLLPKQNGSVEIPPLKLGDVESQPITVQVIES HHHHCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCCEECCCCCCCEEEEEECC DTREENNAREPVFIEASLDQTSVYVQAQAILTLRIYHSVSLYDDSSLTPLQIADARIEQL CCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH GDMRTYEKDINGVRHGVIEMRYAIYPQHSGLLSIAPQTFSATLVDTQPSQDATAQGPKPG HHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCC KLMHISSAATSLTVKPKPMTYPSDAPWLPARSLSLSESWNPEPEHTQVGDSLTRSLTLKV CEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEE EGLASSQLPALPATEANGLRRYPDQPVLNNQSSDRGLIGSREEREALVPSRSGSIELPTV ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCEE DVVWWNTFEDHLEHTSLPARTLQVANNPSLQVDTPAGNAQPLSAADSEALWWWKLSTLVL EEEEECCHHHHHHHCCCCHHEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHH ACTTLLGFGLWWRARWQPAILRAAQTGPSPRTLLDDIKRASQANDPHATRQALDAWARQQ HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC PETLADMAARFVPLSDALDGLNGALYSETGQHWQGEDLWRAIRTIPTAERVQDPVGDSGL CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC PPLYPK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA