| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459415
Identifier: 77459415
GI number: 77459415
Start: 3671027
End: 3672019
Strand: Reverse
Name: 77459415
Synonym: Pfl01_3193
Alternate gene names: NA
Gene position: 3672019-3671027 (Counterclockwise)
Preceding gene: 77459416
Following gene: 77459414
Centisome position: 57.03
GC content: 40.68
Gene sequence:
>993_bases ATGATCAGAATGACTGCAGAAAAGAGAGTTAGAACAATAGGCTCCGTAGCTGATGAGCTAATAAAAAAGTCCAGAGAGGC GGCCTTGGCCTCAGTGCAGATATTTAATAATCCAGCTCTGTTGTTTAAGTCCGAGATATTCATTGTGTTGATGATGATAT CTTGGACTTATCTTCTTCACGCGTTCTATCGAAAGAAGGGTGTCGAGTATAGATACTTTAAGCTTGAAGGCAAGCGCAAG AGATTTCAAAAAACCGCTAAAGGCGCTATGAAACATTGGGAACTAGAGAAGTGCCTAAATCAAAAAGAGTCGCCAATAGA TGCGAGCGCTGCGAACAATCTTCGATTTTTAATTGGCCTTAGGCATGAGATCGAACACCAAATGACAACGAGGATAGATC AGTTTTTAAGTGCAAGGTTCCAAGCTTGCTGCCTAAATTACAATGAAGCTATAAAGTCGCTATTTGGGCCTCAGTACGGC ATAGATAAGCATTTGTCTTTTAGTCTTCAATTCTCATCCTTAAATAAGGAGCAGGTGGACCAATTGTCGCAGGCTAATGG TCTCCCGGAAAATATACGGGCATATATAACTGCGTTTGACTTGGCTCTGAGCGATGAGGAGTTTAATGATCCACGGTTCT CTTATCGTGTTTTCTTTGTACCTAAAACTGCAAACCATAAAGGTCAAGCTGATCAGGTTATTGAGTTCATTAAGCCAGGA TCTGAAATTGCTGAAGGAATGAATACGAAGTATATTCAAATTAAGGAAACTGAACGTCCTAAGTATTTGCCATCTAAAAT TGTCGAAAAAGTTCAAGGCGCCGGCTATCCACGATTTACCATGACGCATCACACCAGGATGTGGCAATTCTGCGAAGCAA AAAAACAAGGTAAAGGTTTTGGAGTAATGGTTATGAATACTTGGTATTGGTATGAAACGTGGCTGGATTACGTACTGGCC GAATGTGAAGAGCGGAAAAGTGAATTTGTATAA
Upstream 100 bases:
>100_bases TTCGCCCATCTATTACTACTGTTATGAGGTGTCGAGACTTTTAAATAAGTGCTAAGTATCTGGTTTGATGGTAGATGAGT GAGCATCATTCACTCCAAGG
Downstream 100 bases:
>100_bases ATTGAATCTGTCTCTGGTGTTTGAATAAGAAAGGGCTTGATTTGGTTTTTAGAATAAATCGTCCCCTTCATTGATGTTGC ATATCAAGAGGATTGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA ECEERKSEFV
Sequences:
>Translated_330_residues MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA ECEERKSEFV >Mature_330_residues MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA ECEERKSEFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38578; Mature: 38578
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH AFYRKKGVEYRYFKLEGKRKRFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGL HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEH RHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYGIDKHLSFSLQFSSLNKEQVD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH QLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG HHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGF HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC GVMVMNTWYWYETWLDYVLAECEERKSEFV EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH AFYRKKGVEYRYFKLEGKRKRFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGL HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEH RHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYGIDKHLSFSLQFSSLNKEQVD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH QLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG HHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGF HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC GVMVMNTWYWYETWLDYVLAECEERKSEFV EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA