Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459415

Identifier: 77459415

GI number: 77459415

Start: 3671027

End: 3672019

Strand: Reverse

Name: 77459415

Synonym: Pfl01_3193

Alternate gene names: NA

Gene position: 3672019-3671027 (Counterclockwise)

Preceding gene: 77459416

Following gene: 77459414

Centisome position: 57.03

GC content: 40.68

Gene sequence:

>993_bases
ATGATCAGAATGACTGCAGAAAAGAGAGTTAGAACAATAGGCTCCGTAGCTGATGAGCTAATAAAAAAGTCCAGAGAGGC
GGCCTTGGCCTCAGTGCAGATATTTAATAATCCAGCTCTGTTGTTTAAGTCCGAGATATTCATTGTGTTGATGATGATAT
CTTGGACTTATCTTCTTCACGCGTTCTATCGAAAGAAGGGTGTCGAGTATAGATACTTTAAGCTTGAAGGCAAGCGCAAG
AGATTTCAAAAAACCGCTAAAGGCGCTATGAAACATTGGGAACTAGAGAAGTGCCTAAATCAAAAAGAGTCGCCAATAGA
TGCGAGCGCTGCGAACAATCTTCGATTTTTAATTGGCCTTAGGCATGAGATCGAACACCAAATGACAACGAGGATAGATC
AGTTTTTAAGTGCAAGGTTCCAAGCTTGCTGCCTAAATTACAATGAAGCTATAAAGTCGCTATTTGGGCCTCAGTACGGC
ATAGATAAGCATTTGTCTTTTAGTCTTCAATTCTCATCCTTAAATAAGGAGCAGGTGGACCAATTGTCGCAGGCTAATGG
TCTCCCGGAAAATATACGGGCATATATAACTGCGTTTGACTTGGCTCTGAGCGATGAGGAGTTTAATGATCCACGGTTCT
CTTATCGTGTTTTCTTTGTACCTAAAACTGCAAACCATAAAGGTCAAGCTGATCAGGTTATTGAGTTCATTAAGCCAGGA
TCTGAAATTGCTGAAGGAATGAATACGAAGTATATTCAAATTAAGGAAACTGAACGTCCTAAGTATTTGCCATCTAAAAT
TGTCGAAAAAGTTCAAGGCGCCGGCTATCCACGATTTACCATGACGCATCACACCAGGATGTGGCAATTCTGCGAAGCAA
AAAAACAAGGTAAAGGTTTTGGAGTAATGGTTATGAATACTTGGTATTGGTATGAAACGTGGCTGGATTACGTACTGGCC
GAATGTGAAGAGCGGAAAAGTGAATTTGTATAA

Upstream 100 bases:

>100_bases
TTCGCCCATCTATTACTACTGTTATGAGGTGTCGAGACTTTTAAATAAGTGCTAAGTATCTGGTTTGATGGTAGATGAGT
GAGCATCATTCACTCCAAGG

Downstream 100 bases:

>100_bases
ATTGAATCTGTCTCTGGTGTTTGAATAAGAAAGGGCTTGATTTGGTTTTTAGAATAAATCGTCCCCTTCATTGATGTTGC
ATATCAAGAGGATTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK
RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG
IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG
SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA
ECEERKSEFV

Sequences:

>Translated_330_residues
MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK
RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG
IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG
SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA
ECEERKSEFV
>Mature_330_residues
MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLHAFYRKKGVEYRYFKLEGKRK
RFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGLRHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYG
IDKHLSFSLQFSSLNKEQVDQLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG
SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGFGVMVMNTWYWYETWLDYVLA
ECEERKSEFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38578; Mature: 38578

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AFYRKKGVEYRYFKLEGKRKRFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGL
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEH
RHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYGIDKHLSFSLQFSSLNKEQVD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH
QLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG
HHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC
SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGF
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC
GVMVMNTWYWYETWLDYVLAECEERKSEFV
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRMTAEKRVRTIGSVADELIKKSREAALASVQIFNNPALLFKSEIFIVLMMISWTYLLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
AFYRKKGVEYRYFKLEGKRKRFQKTAKGAMKHWELEKCLNQKESPIDASAANNLRFLIGL
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEH
RHEIEHQMTTRIDQFLSARFQACCLNYNEAIKSLFGPQYGIDKHLSFSLQFSSLNKEQVD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH
QLSQANGLPENIRAYITAFDLALSDEEFNDPRFSYRVFFVPKTANHKGQADQVIEFIKPG
HHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC
SEIAEGMNTKYIQIKETERPKYLPSKIVEKVQGAGYPRFTMTHHTRMWQFCEAKKQGKGF
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCC
GVMVMNTWYWYETWLDYVLAECEERKSEFV
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA