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The map label for this gene is 77459416

Identifier: 77459416

GI number: 77459416

Start: 3672347

End: 3672778

Strand: Reverse

Name: 77459416

Synonym: Pfl01_3194

Alternate gene names: NA

Gene position: 3672778-3672347 (Counterclockwise)

Preceding gene: 77459419

Following gene: 77459415

Centisome position: 57.04

GC content: 66.2

Gene sequence:

>432_bases
ATGAGATACACCGCACGCTTTTCACCCCCCCAAATCACCCAGGCCGCCGCACTGCTGGCCGCCCTGATCGGCATCGCCAC
CTGGTCATCCCTGCTCCTGACCACCGCCGAATCCCACACCCCGGCCGCCACGCCGCAACTGCTTGCGGCGCGCAGCGACA
ACCCCGCGTTGCAGTGGTTTTCCAACCGCACGGCGCCGGTGGAAATCAAGGTCAGCGGCGTGATGGCGGGGAGTCGCGGG
GCGGTGGCGATTTTGAGTTTGAACGATGGGCCGCCGAGGAGTTTTTTGCAGGGGGAGCGGGTGAGTCTTGGGGTGAAGTT
GGTGGCGGTCGAGGGGGATGGGGTGGTGATTGAGCAGGGTGGGGAGAGGGTGCGGTTGGGGGTGGAGAGGTTGGGGGAGG
GGGTGGAGATGCCGAAGCTGACTCGGCCCTGA

Upstream 100 bases:

>100_bases
CAAAAAACCATCCTGCACGGCCAACATGTAAGGCGTGTGAAATAAAACCGTGAGAATTGCCGCGTAGTCTGGTCACCGGG
ACTAAAAGGAGATTCAGCCC

Downstream 100 bases:

>100_bases
ATTGCAGGATTGAGGTTTGTCATTCTGCCATTTCAGTTGGCTGGGTGCCTTTGGGAGTAGCGGAATGAGTGTCCCCACAC
AAAATGCGAACCGAAAGGCA

Product: putative general secretion pathway protein C

Products: NA

Alternate protein names: General Secretion Pathway Protein C; Type II Secretion System Membrane Protein C

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRYTARFSPPQITQAAALLAALIGIATWSSLLLTTAESHTPAATPQLLAARSDNPALQWFSNRTAPVEIKVSGVMAGSRG
AVAILSLNDGPPRSFLQGERVSLGVKLVAVEGDGVVIEQGGERVRLGVERLGEGVEMPKLTRP

Sequences:

>Translated_143_residues
MRYTARFSPPQITQAAALLAALIGIATWSSLLLTTAESHTPAATPQLLAARSDNPALQWFSNRTAPVEIKVSGVMAGSRG
AVAILSLNDGPPRSFLQGERVSLGVKLVAVEGDGVVIEQGGERVRLGVERLGEGVEMPKLTRP
>Mature_143_residues
MRYTARFSPPQITQAAALLAALIGIATWSSLLLTTAESHTPAATPQLLAARSDNPALQWFSNRTAPVEIKVSGVMAGSRG
AVAILSLNDGPPRSFLQGERVSLGVKLVAVEGDGVVIEQGGERVRLGVERLGEGVEMPKLTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15056; Mature: 15056

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTARFSPPQITQAAALLAALIGIATWSSLLLTTAESHTPAATPQLLAARSDNPALQWF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCEEEE
SNRTAPVEIKVSGVMAGSRGAVAILSLNDGPPRSFLQGERVSLGVKLVAVEGDGVVIEQG
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCHHHHCCCEEEEEEEEEEECCCCEEEECC
GERVRLGVERLGEGVEMPKLTRP
CCEEEEEHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRYTARFSPPQITQAAALLAALIGIATWSSLLLTTAESHTPAATPQLLAARSDNPALQWF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCEEEE
SNRTAPVEIKVSGVMAGSRGAVAILSLNDGPPRSFLQGERVSLGVKLVAVEGDGVVIEQG
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCHHHHCCCEEEEEEEEEEECCCCEEEECC
GERVRLGVERLGEGVEMPKLTRP
CCEEEEEHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA