| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459400
Identifier: 77459400
GI number: 77459400
Start: 3659573
End: 3660526
Strand: Reverse
Name: 77459400
Synonym: Pfl01_3178
Alternate gene names: NA
Gene position: 3660526-3659573 (Counterclockwise)
Preceding gene: 77459401
Following gene: 77459399
Centisome position: 56.85
GC content: 63.73
Gene sequence:
>954_bases ATGAACAGCCAATCGAACCAGCAGGGGATGGCGATCATCAGTGCGCTGCTGATTGCGGCGGTGGTCGCAGTGATCGCTGC CGGCATGCTGACTCGCCAGAGCGTTTCGACCCGGGCGCTGGAAGCCGAACAACTGCGCGTGCAGGGCCGTTGGGTGTTGC ACGGCGGGTTGGAGATCAGCCGGCAGTTGTTGTGGGATGCACGGCAGCGCGATCCGTTGACCCGGCTCGATCAACCGTGG GCGCAGTTGTTGAACACTCAGGGTTTCGAAGGGCGACTGGAGGACGAGCAGGGCAAGTTCAACCTGCGCAATCTGGTGGC CAACGAGCGGATCGATGACGTGCAGGTGCAGGCGTTCGAGCGCTTGTGCGAGTTGATCGGTGTCAGCAGCGGCTTGAGCC GGCGCATCAGTCAGCGGGTGATCGGCTCTTATCCGCACCTGTTGAATGCCCAAGTGGTGGACAAGCCTGTGGCGAAAAAC ACCTTCGACAGCGGGCGCGCCACGTCGCCGTCCGCTTCGCGCAAACCGCAATCGCCGACCTTGCCGATGCTGCGCACGCT TGATGATTTGCGCAGTGTCGACGGGGTCAACGATGCGCTGTTGGCGAAACTGGCGCCGTACCTGACGGTGATTCCGGCGA CCACCTGGCTCAACGGCAACACCGCCACGGCGCCGGTGCTGGCGGCTTATGTGCCGGGGCTGTCGCTGGAGCGGGCGCAG GCGTTGATCAATGAGCGTGACGCCGGGCGCTGGTTTATCAATCGCGGGGATTTCGTCAATCGCCTGCGACTGCCGCAACT GGAGATCACCAGCGTCAAGGTCGGCATCACCAGCGACTGGTTCCGGCTGCGCGGGCAGGCACGGCGGGATCAGCGGCGGG TCAGCCTCGATGCGTTGTTGCATCGCAGTGAAGACCGCTTGCCGCAAGTGATCTGGTCGCGGGTGGGCGTATGA
Upstream 100 bases:
>100_bases CCAACGGCGAGATCGACATCTTTTCCCTCGGCGCCGACGGCCAGCCTGACGGCGACGGTGTGAATGCCGACATCGGTTCC TGGCAGTTGTAAGGCCGGTC
Downstream 100 bases:
>100_bases GCCAGTTGCGCGTGAGTCTGCCGCCGCTGGCGGAGCTGAGTCTCGACAGTGAAGTGGATGCTGCGTGGCTGGATCGACAG GGGCAGGTCACGCGGCAGGA
Product: general secretion pathway protein K
Products: NA
Alternate protein names: General Secretory Pathway Protein K; Type II Secretion System Protein; Type II Secretion System; Type II Secretory Pathway Component PulK; General Secretion Pathway Protein K/X; General Secretory Pathway K Transmembrane Protein; Type II Secretion System Membrane Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNSQSNQQGMAIISALLIAAVVAVIAAGMLTRQSVSTRALEAEQLRVQGRWVLHGGLEISRQLLWDARQRDPLTRLDQPW AQLLNTQGFEGRLEDEQGKFNLRNLVANERIDDVQVQAFERLCELIGVSSGLSRRISQRVIGSYPHLLNAQVVDKPVAKN TFDSGRATSPSASRKPQSPTLPMLRTLDDLRSVDGVNDALLAKLAPYLTVIPATTWLNGNTATAPVLAAYVPGLSLERAQ ALINERDAGRWFINRGDFVNRLRLPQLEITSVKVGITSDWFRLRGQARRDQRRVSLDALLHRSEDRLPQVIWSRVGV
Sequences:
>Translated_317_residues MNSQSNQQGMAIISALLIAAVVAVIAAGMLTRQSVSTRALEAEQLRVQGRWVLHGGLEISRQLLWDARQRDPLTRLDQPW AQLLNTQGFEGRLEDEQGKFNLRNLVANERIDDVQVQAFERLCELIGVSSGLSRRISQRVIGSYPHLLNAQVVDKPVAKN TFDSGRATSPSASRKPQSPTLPMLRTLDDLRSVDGVNDALLAKLAPYLTVIPATTWLNGNTATAPVLAAYVPGLSLERAQ ALINERDAGRWFINRGDFVNRLRLPQLEITSVKVGITSDWFRLRGQARRDQRRVSLDALLHRSEDRLPQVIWSRVGV >Mature_317_residues MNSQSNQQGMAIISALLIAAVVAVIAAGMLTRQSVSTRALEAEQLRVQGRWVLHGGLEISRQLLWDARQRDPLTRLDQPW AQLLNTQGFEGRLEDEQGKFNLRNLVANERIDDVQVQAFERLCELIGVSSGLSRRISQRVIGSYPHLLNAQVVDKPVAKN TFDSGRATSPSASRKPQSPTLPMLRTLDDLRSVDGVNDALLAKLAPYLTVIPATTWLNGNTATAPVLAAYVPGLSLERAQ ALINERDAGRWFINRGDFVNRLRLPQLEITSVKVGITSDWFRLRGQARRDQRRVSLDALLHRSEDRLPQVIWSRVGV
Specific function: Unknown
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35307; Mature: 35307
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQSNQQGMAIISALLIAAVVAVIAAGMLTRQSVSTRALEAEQLRVQGRWVLHGGLEIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHH RQLLWDARQRDPLTRLDQPWAQLLNTQGFEGRLEDEQGKFNLRNLVANERIDDVQVQAFE HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH RLCELIGVSSGLSRRISQRVIGSYPHLLNAQVVDKPVAKNTFDSGRATSPSASRKPQSPT HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCC LPMLRTLDDLRSVDGVNDALLAKLAPYLTVIPATTWLNGNTATAPVLAAYVPGLSLERAQ CHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCEEECCCCCHHHHHHHHHCCCCHHHHH ALINERDAGRWFINRGDFVNRLRLPQLEITSVKVGITSDWFRLRGQARRDQRRVSLDALL HHHCCCCCCCEEEECCCHHHHHCCCCEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHH HRSEDRLPQVIWSRVGV HCCHHHHHHHHHHHHCC >Mature Secondary Structure MNSQSNQQGMAIISALLIAAVVAVIAAGMLTRQSVSTRALEAEQLRVQGRWVLHGGLEIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHH RQLLWDARQRDPLTRLDQPWAQLLNTQGFEGRLEDEQGKFNLRNLVANERIDDVQVQAFE HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH RLCELIGVSSGLSRRISQRVIGSYPHLLNAQVVDKPVAKNTFDSGRATSPSASRKPQSPT HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCC LPMLRTLDDLRSVDGVNDALLAKLAPYLTVIPATTWLNGNTATAPVLAAYVPGLSLERAQ CHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCEEECCCCCHHHHHHHHHCCCCHHHHH ALINERDAGRWFINRGDFVNRLRLPQLEITSVKVGITSDWFRLRGQARRDQRRVSLDALL HHHCCCCCCCEEEECCCHHHHHCCCCEEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHH HRSEDRLPQVIWSRVGV HCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA