| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is xcpT [H]
Identifier: 77459401
GI number: 77459401
Start: 3660535
End: 3660993
Strand: Reverse
Name: xcpT [H]
Synonym: Pfl01_3179
Alternate gene names: 77459401
Gene position: 3660993-3660535 (Counterclockwise)
Preceding gene: 77459403
Following gene: 77459400
Centisome position: 56.86
GC content: 63.18
Gene sequence:
>459_bases ATGGATATCGCGCAATTCAAACAGCCCAGTCGACCGAGCCGGATGCCCCGTGGGCAGCAGGGTTTCACGCTGATCGAGAT CATGGTGGTGGTGGTGATTCTCGGGATTCTGGCGGCGATGGTAGTGCCCAAGGTGCTCGACCGGCCGGATCAGGCGCGGG CCACGGCGGCGAAGCAGGACATTGGCGGGTTGATGCAGGCGCTGAAGCTGTATCGCCTCGATCACGGCACTTACCCGAGC CAGAGCCAGGGCCTGAAAGTGCTGGTGGAGCGGCCGGCCGATGCGAAGAACAGCAACTGGCGCTCGTACCTGGAGCGCCT GCCGAATGACCCGTGGGGTCGGCCTTATCAGTACCTCAATCCCGGTGCCAACGGCGAGATCGACATCTTTTCCCTCGGCG CCGACGGCCAGCCTGACGGCGACGGTGTGAATGCCGACATCGGTTCCTGGCAGTTGTAA
Upstream 100 bases:
>100_bases TGACGGCTTGACGACGAAAACACCCGAGGATTTTCAACATCCCTGACATATCTTCTTGCAACACTGCGCGTCGAATCGAA TCAAGCCAGGGAATGACGAG
Downstream 100 bases:
>100_bases GGCCGGTCATGAACAGCCAATCGAACCAGCAGGGGATGGCGATCATCAGTGCGCTGCTGATTGCGGCGGTGGTCGCAGTG ATCGCTGCCGGCATGCTGAC
Product: general secretion pathway protein G
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MDIAQFKQPSRPSRMPRGQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPS QSQGLKVLVERPADAKNSNWRSYLERLPNDPWGRPYQYLNPGANGEIDIFSLGADGQPDGDGVNADIGSWQL
Sequences:
>Translated_152_residues MDIAQFKQPSRPSRMPRGQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPS QSQGLKVLVERPADAKNSNWRSYLERLPNDPWGRPYQYLNPGANGEIDIFSLGADGQPDGDGVNADIGSWQL >Mature_152_residues MDIAQFKQPSRPSRMPRGQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPS QSQGLKVLVERPADAKNSNWRSYLERLPNDPWGRPYQYLNPGANGEIDIFSLGADGQPDGDGVNADIGSWQL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=142, Percent_Identity=45.0704225352113, Blast_Score=101, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 16730; Mature: 16730
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIAQFKQPSRPSRMPRGQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQD CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IGGLMQALKLYRLDHGTYPSQSQGLKVLVERPADAKNSNWRSYLERLPNDPWGRPYQYLN HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHCC PGANGEIDIFSLGADGQPDGDGVNADIGSWQL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDIAQFKQPSRPSRMPRGQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQD CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IGGLMQALKLYRLDHGTYPSQSQGLKVLVERPADAKNSNWRSYLERLPNDPWGRPYQYLN HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHCC PGANGEIDIFSLGADGQPDGDGVNADIGSWQL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]