| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459398
Identifier: 77459398
GI number: 77459398
Start: 3657893
End: 3658438
Strand: Reverse
Name: 77459398
Synonym: Pfl01_3176
Alternate gene names: NA
Gene position: 3658438-3657893 (Counterclockwise)
Preceding gene: 77459399
Following gene: 77459397
Centisome position: 56.82
GC content: 65.2
Gene sequence:
>546_bases ATGAATAGCCCATCGCTTGCGAAATACCGCGCCGGTTGGCAGCGCTTCAACGCTGAGTTGCAGGCCCGTTGGCAGCCGTT GGCCGTGCGGGAGAAGCGCATGGTCGGTGGGATGGCGGCGCTGTTGCTGGGGCTGTTTGTGTGGGTGGCGTTGGTTCAGC CGCCGCTGAAGAAGATCGCCGCCTCGCAAGTCGAAACCCCGAAATTGCGCGCCCAGGCAGAAGCGCTGGAAGTGCTGTTG CGCGACGTCAGCGTGCGCCCCGACGGGCAGAACCTGGAGCAGTCGCTGCAGCAAACGTTGCAGGCCAGCGGACTGGGCGG CCATTACCAATTGGCGGCCGCGTCCGCCGGCTGGCAGTTGACCTTCGATGCGGCACCGGCCGACGCCGTTCTCGACTGGC TGCTGAGCCAGCCGCGGAATTTTTCACTGCAAGTGGTCGAGGCTCGTCTGCAACGCGCAGACGACGCCGCGACCGATGAC ACCGCCGGCACTCTGTCGGGCACCGTACGCATGGATCAGGCGCTGGGCGCTAAGGAAGCTTCATGA
Upstream 100 bases:
>100_bases GCCGGCATCAGCATCAGCCCGAATGATGACGGCTGGGTCTTGCGCCCGGCCGGCGAGGCGACCGCCGCCACCGACAACGA CGACAGCAGCGGAGCCGAAG
Downstream 100 bases:
>100_bases AGGGGTCAGGGTCCAAACGCATGGCGTTGCCGATGCTGTTGATGGCATTGAGCGCGTGCAGCAACACCACACCACCGAAT CAACCGCCGCTGCTGGTGGA
Product: general secretion pathway M protein
Products: NA
Alternate protein names: General Secretion Pathway M Protein; Type II Secretion System Protein M; General Secretory Pathway Protein; Type II Secretion Pathway Protein M; General Secretion Pathway Protein GspM
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNSPSLAKYRAGWQRFNAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIAASQVETPKLRAQAEALEVLL RDVSVRPDGQNLEQSLQQTLQASGLGGHYQLAAASAGWQLTFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAATDD TAGTLSGTVRMDQALGAKEAS
Sequences:
>Translated_181_residues MNSPSLAKYRAGWQRFNAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIAASQVETPKLRAQAEALEVLL RDVSVRPDGQNLEQSLQQTLQASGLGGHYQLAAASAGWQLTFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAATDD TAGTLSGTVRMDQALGAKEAS >Mature_181_residues MNSPSLAKYRAGWQRFNAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIAASQVETPKLRAQAEALEVLL RDVSVRPDGQNLEQSLQQTLQASGLGGHYQLAAASAGWQLTFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAATDD TAGTLSGTVRMDQALGAKEAS
Specific function: Unknown
COG id: COG3149
COG function: function code U; Type II secretory pathway, component PulM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19592; Mature: 19592
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPSLAKYRAGWQRFNAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASQVETPKLRAQAEALEVLLRDVSVRPDGQNLEQSLQQTLQASGLGGHYQLAAASAGWQL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEE TFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAATDDTAGTLSGTVRMDQALGAKEA EECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC S C >Mature Secondary Structure MNSPSLAKYRAGWQRFNAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASQVETPKLRAQAEALEVLLRDVSVRPDGQNLEQSLQQTLQASGLGGHYQLAAASAGWQL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEE TFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAATDDTAGTLSGTVRMDQALGAKEA EECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA