| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459358
Identifier: 77459358
GI number: 77459358
Start: 3597954
End: 3598970
Strand: Direct
Name: 77459358
Synonym: Pfl01_3136
Alternate gene names: NA
Gene position: 3597954-3598970 (Clockwise)
Preceding gene: 77459357
Following gene: 77459359
Centisome position: 55.88
GC content: 63.23
Gene sequence:
>1017_bases ATGGACATGAACATCAGCGGGACATTGACCCAGGTGTTGGTGATCGAGGACAGCAGCCAGATCGGCCATGCCCGGCGTAC GGCCCAGCGTCTGGCCGAGCAACACGGTTTTGGCGAAAGCGATGCCGGCCGCGTCGCGCTGGTGGCCACGGAGCTGGCGA GCAATGTGCTCAAGCATGCCGGGCACGGCGAACTTCACTTGCGTCTGTTGCCGCGTCAGGGTGACGACGGCATCGAAATG ATTGCAGTCGACCGGGCCCAGGGCTTTGATCTGGATGCGTGCATGGCCGATGGTTTTTCCACCGGCGGTACTCAGGGCAT CGGCCTGGGCGCCGTAGCCCGCCAGGCGGATGTCTTTGATGTTTTTGCCGACCATCGCGGCGCAGTGCTGCTGGCTCGTT TATACCCGCGCAGCGACCGGCAGGTGGATATGCCGTATGGTGTCAGCCAACACTCGCTGCACGACGATCCGGCCTGCGGC GATGTCTGGCATCTGGCGACGCATGGCGCCGATGTCAGCGCTCTGATAGTCGACGGACTGGGCCATGGCGAGGACGCCGA GCGTGCGGCCCGTGCCGGAGAAAAGGCCTTTGCCCTGAATCCGTTCGGGGCGCCGACGCTGCTGATGGAAGACATGCATC GCGAGATGATCGGGAGTCGGGGCGGCGCGGTGGCATTCGCGCAGTTTCATGCCGACCGCGCCAGTCTTTCGTTCACCGGT GTCGGCAACATCGGTGCCAGCCTGATCGCTTCCGACAAGTCGCGCGGACTGGCCTCGCATCCGGGCATCGTCGGTGGCCA ATACAGAAAAGCTCAGCCTTTTGACTATGCTCACGTGAACGGACATCTATTGATCATGTATAGCGACGGCTTGCAGTCCC GCTGGAACCTTCAGGATTACCCCGGTCTGGTGCATCGCCATCCCGCCGTGATTGCCACCGTCCTGCACCGCGACTTCTGC CGCGGGCGCGACGATGTCACCGTGCTGGTGGTTGCCCTGGAGTCCGCCCATGACTGA
Upstream 100 bases:
>100_bases GCAGCGGTCTGGGTCTGGGCCTGACCGGGGCCAAGCGACTGGTAGATGAATTCGAACTGGACACCGAGCCCGGCAAAGGC ACTCGCATAACGATCACCCG
Downstream 100 bases:
>100_bases GTCCCCGACCTTGAACAACGCCGAACAGGCTGCGTTGATCGCCCAGTTGCAGAGCGAAACCGCTGCGTTGCGCGAAGAGC TCGACGAAACCAATCAGGGC
Product: anti-sigma-regulatory factor (Ser/Thr protein kinase and phosphatase)
Products: NA
Alternate protein names: Magnesium Or Manganese-Dependent Protein Phosphatase; Anti-Sigma Regulatory Factor; Stage II Sporulation E Family Protein; RS Protein; RS-Related Protein; Anti-Sigma-Regulatory Factor; Anti-Sigma B Factor RsbT; Serine/Threonine-Protein Kinase RsbT; LigA Protein; Stage II Sporulation Protein E; Positive Regulator Of Sigma-B Activity; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVATELASNVLKHAGHGELHLRLLPRQGDDGIEM IAVDRAQGFDLDACMADGFSTGGTQGIGLGAVARQADVFDVFADHRGAVLLARLYPRSDRQVDMPYGVSQHSLHDDPACG DVWHLATHGADVSALIVDGLGHGEDAERAARAGEKAFALNPFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTG VGNIGASLIASDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDYPGLVHRHPAVIATVLHRDFC RGRDDVTVLVVALESAHD
Sequences:
>Translated_338_residues MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVATELASNVLKHAGHGELHLRLLPRQGDDGIEM IAVDRAQGFDLDACMADGFSTGGTQGIGLGAVARQADVFDVFADHRGAVLLARLYPRSDRQVDMPYGVSQHSLHDDPACG DVWHLATHGADVSALIVDGLGHGEDAERAARAGEKAFALNPFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTG VGNIGASLIASDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDYPGLVHRHPAVIATVLHRDFC RGRDDVTVLVVALESAHD >Mature_338_residues MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVATELASNVLKHAGHGELHLRLLPRQGDDGIEM IAVDRAQGFDLDACMADGFSTGGTQGIGLGAVARQADVFDVFADHRGAVLLARLYPRSDRQVDMPYGVSQHSLHDDPACG DVWHLATHGADVSALIVDGLGHGEDAERAARAGEKAFALNPFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTG VGNIGASLIASDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDYPGLVHRHPAVIATVLHRDFC RGRDDVTVLVVALESAHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36128; Mature: 36128
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVATELASNVLKHA CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHC GHGELHLRLLPRQGDDGIEMIAVDRAQGFDLDACMADGFSTGGTQGIGLGAVARQADVFD CCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VFADHRGAVLLARLYPRSDRQVDMPYGVSQHSLHDDPACGDVWHLATHGADVSALIVDGL HHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECC GHGEDAERAARAGEKAFALNPFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTG CCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEE VGNIGASLIASDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDY CCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCC PGLVHRHPAVIATVLHRDFCRGRDDVTVLVVALESAHD CCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC >Mature Secondary Structure MDMNISGTLTQVLVIEDSSQIGHARRTAQRLAEQHGFGESDAGRVALVATELASNVLKHA CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHC GHGELHLRLLPRQGDDGIEMIAVDRAQGFDLDACMADGFSTGGTQGIGLGAVARQADVFD CCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VFADHRGAVLLARLYPRSDRQVDMPYGVSQHSLHDDPACGDVWHLATHGADVSALIVDGL HHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECC GHGEDAERAARAGEKAFALNPFGAPTLLMEDMHREMIGSRGGAVAFAQFHADRASLSFTG CCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEE VGNIGASLIASDKSRGLASHPGIVGGQYRKAQPFDYAHVNGHLLIMYSDGLQSRWNLQDY CCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCC PGLVHRHPAVIATVLHRDFCRGRDDVTVLVVALESAHD CCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA