Click here to switch to the map view.

The map label for this gene is rsbT [H]

Identifier: 77459357

GI number: 77459357

Start: 3597559

End: 3597963

Strand: Direct

Name: rsbT [H]

Synonym: Pfl01_3135

Alternate gene names: 77459357

Gene position: 3597559-3597963 (Clockwise)

Preceding gene: 77459356

Following gene: 77459358

Centisome position: 55.88

GC content: 62.72

Gene sequence:

>405_bases
ATGACCGTGCGCAGCAGCGGTACCCAACCGATCAACATCGAGCAGGATGTGGTGCTGGCGCGGCAAACGGCGCGCAAGCT
GGCCACCGAGTGCGGCATGCGCCTGATCGACCTGACCAAACTGGTGACCGCCGTCAGTGAACTGGCGCGCAACACCATGG
TGTATGGCGGGGGCGGAGACATGGACTGGCAGATCCTCGATGACAACCACAAGGTCGGCCTGCGCCTGACCTTTCGCGAT
GAAGGCCCGGGTATTCCCGACATCAAACTGGCGATGACCGACGGCTGGACCTCCGGCAGCGGTCTGGGTCTGGGCCTGAC
CGGGGCCAAGCGACTGGTAGATGAATTCGAACTGGACACCGAGCCCGGCAAAGGCACTCGCATAACGATCACCCGATGGA
CATGA

Upstream 100 bases:

>100_bases
CGATCACGCTGGTGGAGCTCGGCCTGTACCTGCCGGGCGTCAGCACCGCGCTGAACGTCGAGCGCGGAATGAAACTGCTG
CAGGAACGAGTACGCCAGCA

Downstream 100 bases:

>100_bases
ACATCAGCGGGACATTGACCCAGGTGTTGGTGATCGAGGACAGCAGCCAGATCGGCCATGCCCGGCGTACGGCCCAGCGT
CTGGCCGAGCAACACGGTTT

Product: putative anti-sigma-regulatory factor

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGDMDWQILDDNHKVGLRLTFRD
EGPGIPDIKLAMTDGWTSGSGLGLGLTGAKRLVDEFELDTEPGKGTRITITRWT

Sequences:

>Translated_134_residues
MTVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGDMDWQILDDNHKVGLRLTFRD
EGPGIPDIKLAMTDGWTSGSGLGLGLTGAKRLVDEFELDTEPGKGTRITITRWT
>Mature_133_residues
TVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGDMDWQILDDNHKVGLRLTFRDE
GPGIPDIKLAMTDGWTSGSGLGLGLTGAKRLVDEFELDTEPGKGTRITITRWT

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 14591; Mature: 14460

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCC
MDWQILDDNHKVGLRLTFRDEGPGIPDIKLAMTDGWTSGSGLGLGLTGAKRLVDEFELDT
CCEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCC
EPGKGTRITITRWT
CCCCCCEEEEEECC
>Mature Secondary Structure 
TVRSSGTQPINIEQDVVLARQTARKLATECGMRLIDLTKLVTAVSELARNTMVYGGGGD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCC
MDWQILDDNHKVGLRLTFRDEGPGIPDIKLAMTDGWTSGSGLGLGLTGAKRLVDEFELDT
CCEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCC
EPGKGTRITITRWT
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]