| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yegH [H]
Identifier: 77459316
GI number: 77459316
Start: 3542235
End: 3543791
Strand: Reverse
Name: yegH [H]
Synonym: Pfl01_3094
Alternate gene names: 77459316
Gene position: 3543791-3542235 (Counterclockwise)
Preceding gene: 77459317
Following gene: 77459314
Centisome position: 55.04
GC content: 59.73
Gene sequence:
>1557_bases ATGGAATGGTTAGCGGATCCCACGGCATGGCTGGGCTTGTTGACACTGATCGTGCTGGAACTGGTACTGGGTATCGACAA CCTGGTGTTCATCGCGATCCTGGCGGACAAACTGCCGCCGCATCAGCGCGACCGCGCACGCATCATCGGTTTGAGCCTGG CGCTGATCATGCGTCTTGGCCTGCTGGCGAGTATTTCCTGGCTGGTCACCCTCACGGCACCGTTGTTCGAGGTGTTCGGC AAGAGCTTCTCCGGCCGTGACCTGATCATGCTGTTCGGTGGTGTGTTCCTGTTGTTCAAGGCGACCATGGAATTGCACGA ACGGCTGGAAGGCCACATCGGTGAGCGCTCGACCAACACCGCTTATGCGCTGTTCTGGCCGATCGTGGCGCAGATCGTCG TGCTCGACGCCGTGTTCTCCCTGGACGCGGTGATTACGGCCGTTGGCATGGTCGATGAACTGGCGGTGATGATGATTGCG GTGATCGTGTCCATCGGTGTGATGATCGTTGCCAGCAAGCCGCTGACCCGCTTCGTCAATGCCCACCCGACGGTGATCAT GCTGTGTCTGGGCTTCCTGATGATGATCGGTTTTGCCCTGACGGCCGAAGGCCTGGGCTTCCACATTCCGAAAGGTTATC TGTACGCTGCCATTGGTTTCTCGATCCTGATCGAGATCTTCAACCAGATCGCCCGCGCTCGTCGCAAGCGCTCGATGCAG GGCTTGCGACCGATGCGTGAGCGCACGGCTCACGCGGTGATGCGTCTGTTGGGTGGTCGCAAACTGGCGGTGGAAGAAGT CGGCGAGGAAATCTCCGACTTGCTGGACAATGGTGAAGCGCCGAGCACGGAGCTGTTCGACCGTCGCGAGCGGGTGATGA TCAGCGGTGTGCTGCAATTGGCCGAGCGACCGATTCGTGCCTTGATGACGGTGCGCGCCGATGTCGATCACATTGATCTG GCCGACGACGCCGAGGCTATTCGTACACGGTTGATGCATTCGTCCTATTCGCGCTTGCCGTTGATTCGTAACGGCGCAGT GGATGAGCCGCTGGGCTTCGTGCACAAGAAGGAACTGCTCAAGGAATACCTGGCCGGCAACGAGCCGAACCTTGAACACT TGGCGCGCAAGACCGTCAATCTGCTGGACAGTTATTCGATCCTCAACGCACTGGAACAAATGCGTGCGGCCTCGACCCAC ATTGCCTTTGTGGTGAACGAGTTCGGTGACTTTGTGGGTGTGTTGACCATGACCGACATTCTCGAGTCGATTGCCGGCGA ACTGCCGGACGCCAGCGAAATCGCTGGCCCCGACGTGGTCGAGGAGCAGGGCGGGTTTATCGTCAACGGTGCGCTGAACC TGACCCGCATCCGCGAACATACCGGTTTTCGCGCCGAGCCGACCGAGGATTACCAGACCCTGGCCGGGCTGGTGATGAGC CTGCTGGATCGCCTGCCGATCAAGGGCGATCGTCTGCAGCATGAAGGCTGGGGCATGACCGTAATGGCAGTCGAAGAACG TCGCGTGACGCGGGTGTTGCTGGTGCGTGAGGCGTGA
Upstream 100 bases:
>100_bases CGACTACCGACTATCGTTGTAGGCGCAGCCTTCGAGCTTTCGCGCCGCACTTTGCCGTGTCCGGCAGCCTGAATTCACTG ACGAGAGATAGAGACAGATT
Downstream 100 bases:
>100_bases CGGCACTTTCATGAAAGGTTCCGCCGTTTTGCGCGGTGGACGGTGCAAAGGGTGCGGAGGGTGTCACGCAGCCAGTTCAG GTCATGGGCCGATTTGTGCG
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARIIGLSLALIMRLGLLASISWLVTLTAPLFEVFG KSFSGRDLIMLFGGVFLLFKATMELHERLEGHIGERSTNTAYALFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIA VIVSIGVMIVASKPLTRFVNAHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEIFNQIARARRKRSMQ GLRPMRERTAHAVMRLLGGRKLAVEEVGEEISDLLDNGEAPSTELFDRRERVMISGVLQLAERPIRALMTVRADVDHIDL ADDAEAIRTRLMHSSYSRLPLIRNGAVDEPLGFVHKKELLKEYLAGNEPNLEHLARKTVNLLDSYSILNALEQMRAASTH IAFVVNEFGDFVGVLTMTDILESIAGELPDASEIAGPDVVEEQGGFIVNGALNLTRIREHTGFRAEPTEDYQTLAGLVMS LLDRLPIKGDRLQHEGWGMTVMAVEERRVTRVLLVREA
Sequences:
>Translated_518_residues MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARIIGLSLALIMRLGLLASISWLVTLTAPLFEVFG KSFSGRDLIMLFGGVFLLFKATMELHERLEGHIGERSTNTAYALFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIA VIVSIGVMIVASKPLTRFVNAHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEIFNQIARARRKRSMQ GLRPMRERTAHAVMRLLGGRKLAVEEVGEEISDLLDNGEAPSTELFDRRERVMISGVLQLAERPIRALMTVRADVDHIDL ADDAEAIRTRLMHSSYSRLPLIRNGAVDEPLGFVHKKELLKEYLAGNEPNLEHLARKTVNLLDSYSILNALEQMRAASTH IAFVVNEFGDFVGVLTMTDILESIAGELPDASEIAGPDVVEEQGGFIVNGALNLTRIREHTGFRAEPTEDYQTLAGLVMS LLDRLPIKGDRLQHEGWGMTVMAVEERRVTRVLLVREA >Mature_518_residues MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARIIGLSLALIMRLGLLASISWLVTLTAPLFEVFG KSFSGRDLIMLFGGVFLLFKATMELHERLEGHIGERSTNTAYALFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIA VIVSIGVMIVASKPLTRFVNAHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEIFNQIARARRKRSMQ GLRPMRERTAHAVMRLLGGRKLAVEEVGEEISDLLDNGEAPSTELFDRRERVMISGVLQLAERPIRALMTVRADVDHIDL ADDAEAIRTRLMHSSYSRLPLIRNGAVDEPLGFVHKKELLKEYLAGNEPNLEHLARKTVNLLDSYSILNALEQMRAASTH IAFVVNEFGDFVGVLTMTDILESIAGELPDASEIAGPDVVEEQGGFIVNGALNLTRIREHTGFRAEPTEDYQTLAGLVMS LLDRLPIKGDRLQHEGWGMTVMAVEERRVTRVLLVREA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI310128564, Length=231, Percent_Identity=24.6753246753247, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI87082033, Length=518, Percent_Identity=51.3513513513513, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1788119, Length=520, Percent_Identity=51.3461538461538, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1789197, Length=236, Percent_Identity=49.1525423728814, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1790664, Length=232, Percent_Identity=23.7068965517241, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI145693175, Length=239, Percent_Identity=24.2677824267782, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786879, Length=237, Percent_Identity=24.8945147679325, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 57345; Mature: 57345
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARIIGLSLALIMRLG CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLASISWLVTLTAPLFEVFGKSFSGRDLIMLFGGVFLLFKATMELHERLEGHIGERSTNT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AYALFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIAVIVSIGVMIVASKPLTRFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC AHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEIFNQIARARRKRSMQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRPMRERTAHAVMRLLGGRKLAVEEVGEEISDLLDNGEAPSTELFDRRERVMISGVLQL HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AERPIRALMTVRADVDHIDLADDAEAIRTRLMHSSYSRLPLIRNGAVDEPLGFVHKKELL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH KEYLAGNEPNLEHLARKTVNLLDSYSILNALEQMRAASTHIAFVVNEFGDFVGVLTMTDI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESIAGELPDASEIAGPDVVEEQGGFIVNGALNLTRIREHTGFRAEPTEDYQTLAGLVMS HHHHHCCCCCCHHCCCCCCHHHCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLDRLPIKGDRLQHEGWGMTVMAVEERRVTRVLLVREA HHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHEEECC >Mature Secondary Structure MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARIIGLSLALIMRLG CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLASISWLVTLTAPLFEVFGKSFSGRDLIMLFGGVFLLFKATMELHERLEGHIGERSTNT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AYALFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIAVIVSIGVMIVASKPLTRFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC AHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEIFNQIARARRKRSMQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRPMRERTAHAVMRLLGGRKLAVEEVGEEISDLLDNGEAPSTELFDRRERVMISGVLQL HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AERPIRALMTVRADVDHIDLADDAEAIRTRLMHSSYSRLPLIRNGAVDEPLGFVHKKELL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH KEYLAGNEPNLEHLARKTVNLLDSYSILNALEQMRAASTHIAFVVNEFGDFVGVLTMTDI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESIAGELPDASEIAGPDVVEEQGGFIVNGALNLTRIREHTGFRAEPTEDYQTLAGLVMS HHHHHCCCCCCHHCCCCCCHHHCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLDRLPIKGDRLQHEGWGMTVMAVEERRVTRVLLVREA HHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]