Click here to switch to the map view.

The map label for this gene is peb1A [H]

Identifier: 77459314

GI number: 77459314

Start: 3540608

End: 3541456

Strand: Reverse

Name: peb1A [H]

Synonym: Pfl01_3092

Alternate gene names: 77459314

Gene position: 3541456-3540608 (Counterclockwise)

Preceding gene: 77459316

Following gene: 77459313

Centisome position: 55.01

GC content: 59.72

Gene sequence:

>849_bases
ATGCATCGCCGACCTTCCTTGTTCAAAGCGTGTGTTTTTGTTCTCGCGGCTTCGTCCGCTGTCATGGGTATCGCCCAGGC
GGCTGACAGCAAGCTCGACAGCGTCCTGGCCCGTGGAAAACTGATTGTGGGGACCGGCAGCACCAATGCGCCGTGGCACT
TCCAGGGCGCGGACGGCAAGTTGCAGGGCTTTGATATCGACATTGCCCGGATGGTGGCCAAAGGTCTGTTCAATGACCCG
AGCAAAGTCGAGTTCGTAGTGCAGTCGTCCGATGCGCGGATTCCCAATCTGTTGACTGACAAAGTCGACATGAGCTGTCA
GTTCATCACCGTCACCGCCAGCCGTGCGCAGCAAGTGGCGTTCACCCTGCCGTACTACCGCGAAGGCGTCGGCCTGTTGC
TGCCGAACAACAGCAAGTACAAGGAAATCGAAGACCTGCAGGCCGGTGGTGACGGCGTGACCGTAGCCGTGCTGCAGAAC
GTGTACGCCGAAGAGCTGGTGCATCAGGCGCTGCCCAAGGCCAAGGTCGATCAGTACGACAGCGTCGATCTGATGTACCA
GGCCGTTAACTCCGGTCGCGCCGATGCCGCTGCGACCGATCAGTCTTCGGTCAAATACCTGATGGTGCAGAACCCTGGCC
GCTATCGCAGCCCGACGTATGCCTGGAGCCCGCAGACCTACGCCTGCGCCGTCAAACGCGGCGATCAGGACTGGCTGAAC
TTCGTCAACACCGCCCTGCATGAAGCCATGACCGGCGTCGAGTTCCCGACTTATGCCGCGTCGTTCAAGCAATGGTTCGG
CGTGGATCTGCCATCGCCTGCCATCGGTTTCCCTGTCGAATTCAAATGA

Upstream 100 bases:

>100_bases
GATTCCCCATGAATCCTGTGGCACACTTTCTGCTGTCTATTCCGTAGTAACAAACCGTATTCCGGTATAGCGGAATAAAC
AACTTCCAGGAGTGCTTGCC

Downstream 100 bases:

>100_bases
TCCCGTGAGAGTGGGGCGCCCTGATGCGCCCCGCTCAAGGTACTGCCGACCATGAACTATCAGTTGAACTTTGCCGCCGT
GTGGCGCGATTTCGACACCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBF1; PEB1 [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDP
SKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQN
VYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLN
FVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK

Sequences:

>Translated_282_residues
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDP
SKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQN
VYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLN
FVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK
>Mature_282_residues
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDP
SKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQN
VYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLN
FVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK

Specific function: Common antigen and a major cell adherence molecule. Most probably involved, with PEB1C, in a binding-protein-dependent transport system for an amino acid. May be involved in binding to intestinal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=271, Percent_Identity=28.7822878228782, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787031, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787085, Length=234, Percent_Identity=26.0683760683761, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=26.4957264957265, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788649, Length=173, Percent_Identity=28.9017341040462, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787088, Length=227, Percent_Identity=24.2290748898678, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1786876, Length=262, Percent_Identity=22.9007633587786, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30790; Mature: 30790

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCC
LQGFDIDIARMVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVA
EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEEECCCCCEEE
FTLPYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQNVYAEELVHQALPKAKVDQYD
EECCHHHCCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCC
SVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLN
CHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEEECCCHHHHH
FVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRRPSLFKACVFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCC
LQGFDIDIARMVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVA
EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEEECCCCCEEE
FTLPYYREGVGLLLPNNSKYKEIEDLQAGGDGVTVAVLQNVYAEELVHQALPKAKVDQYD
EECCHHHCCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCC
SVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLN
CHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEEECCCHHHHH
FVNTALHEAMTGVEFPTYAASFKQWFGVDLPSPAIGFPVEFK
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204; 1885571 [H]