| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is glnP [H]
Identifier: 77459313
GI number: 77459313
Start: 3539894
End: 3540556
Strand: Reverse
Name: glnP [H]
Synonym: Pfl01_3091
Alternate gene names: 77459313
Gene position: 3540556-3539894 (Counterclockwise)
Preceding gene: 77459314
Following gene: 77459312
Centisome position: 54.99
GC content: 61.09
Gene sequence:
>663_bases ATGAACTATCAGTTGAACTTTGCCGCCGTGTGGCGCGATTTCGACACCTTGCTGGCGGGGCTCGGTCTGGGCCTCGAACT GGCGCTGGTGTCGATCGCCATCGGCTGCGTGATCGGCCTGCTGATGGCGTTTGCCTTGCTGTCCAGGCATCGCGCCTTGC GGGTGCTGGCATCGGTGTATGTGACGGTGATCCGTAACACGCCGATTCTGGTGTTGATCCTGTTGATCTACTTTGCGTTG CCGAGCCTGGGGATCCGGCTGGACAAGATCCCGTCGTTCATCATCACCCTGTCGCTGTATGCCGGGGCGTACCTGACCGA AGTGTTCCGCGGTGGCTTGTTGAGCATCCCCAAGGGCCAGCGCGAAGCGGGACTGGCCATTGGTCTGGGCGAGTGGCAGG TGAAGGCTTATGTCACCGTGCCGGTGATGCTGCGCAACGTGCTGCCGGCGCTGTCGAACAACTTCATTTCGCTGTTCAAG GACACCTCGCTGGCCGCCGCAATCGCGGTGCCGGAGCTGACCTATTACGCGCGCAAGATCAACGTCGAGAGCTACCGGGT GATCGAAACCTGGCTGGTGACCACGGCGTTGTATGTCGCGGCCTGTTACCTCATTGCCATGCTGCTGCGTTACCTCGAGC AGCGTCTGGCGATCCGCCGATAG
Upstream 100 bases:
>100_bases CGTGGATCTGCCATCGCCTGCCATCGGTTTCCCTGTCGAATTCAAATGATCCCGTGAGAGTGGGGCGCCCTGATGCGCCC CGCTCAAGGTACTGCCGACC
Downstream 100 bases:
>100_bases GAGGCTGCGATGTACCAATCCCCCAGTTGGTTGCATGAGTTGTGGATTGCCCGCGAAGCCTTGTGGCAAGGGTTTCTGAC CAGTGTGCAGGTGTCGGCGC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNYQLNFAAVWRDFDTLLAGLGLGLELALVSIAIGCVIGLLMAFALLSRHRALRVLASVYVTVIRNTPILVLILLIYFAL PSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFK DTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR
Sequences:
>Translated_220_residues MNYQLNFAAVWRDFDTLLAGLGLGLELALVSIAIGCVIGLLMAFALLSRHRALRVLASVYVTVIRNTPILVLILLIYFAL PSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFK DTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR >Mature_220_residues MNYQLNFAAVWRDFDTLLAGLGLGLELALVSIAIGCVIGLLMAFALLSRHRALRVLASVYVTVIRNTPILVLILLIYFAL PSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFK DTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=222, Percent_Identity=38.7387387387387, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1788226, Length=200, Percent_Identity=39.5, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=31.25, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1788646, Length=205, Percent_Identity=31.219512195122, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=27.3542600896861, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788645, Length=216, Percent_Identity=29.1666666666667, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787087, Length=232, Percent_Identity=27.1551724137931, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=28.2407407407407, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=29.3233082706767, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=25, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24382; Mature: 24382
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQLNFAAVWRDFDTLLAGLGLGLELALVSIAIGCVIGLLMAFALLSRHRALRVLASVY CCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVIRNTPILVLILLIYFALPSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQ HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC REAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKI CCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHC NVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYQLNFAAVWRDFDTLLAGLGLGLELALVSIAIGCVIGLLMAFALLSRHRALRVLASVY CCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVIRNTPILVLILLIYFALPSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSIPKGQ HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC REAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKI CCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHC NVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]