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The map label for this gene is ndpA [C]

Identifier: 77459274

GI number: 77459274

Start: 3493847

End: 3494887

Strand: Reverse

Name: ndpA [C]

Synonym: Pfl01_3052

Alternate gene names: 77459274

Gene position: 3494887-3493847 (Counterclockwise)

Preceding gene: 77459275

Following gene: 77459273

Centisome position: 54.28

GC content: 44.96

Gene sequence:

>1041_bases
ATGGACATCCGAGAGTCGATTATTCATGGGGTCTTGAAGGCTAAAGAGACGAATGGTTCGGACTCTATCACTATGCGCCG
TCGTCCCGTAATTTTGCCGCTAGATGATCGACTCAACACTTTGTGTACAGATGTCTTAGCTCTCTATACAAAGCTGAGCA
ATGGTTATGGTACTTTTGGGCAGGGGCCTGCGCATCCGTTTCCGAACATTATGCTGGACTACTCTAGCGAAGGCTCTGAT
ATTATTGAGTTTAGCAATACTGCTTGTGACCTCATTGCCGCTAGGATGAAAGACCAGTTCATGGCCACTACAAGCTGGCC
TCTATTTGTTCGATATACTAACCAAGGGCGAGATTGGCTTCTAATTGCGATGCTTAAACTCAAGGAAGGTGTGGGCATTG
ATGAGGAGACTCTCGATCTAAATAATTCGCTATCATTCGATATTAGTCATTTACATGAAGCCGCGCGCATTGATATCGAG
AAGTGGCAAAGTAACCAGCAACCTTATTTGTCATTCATAAAGCGTAGAGCCGGTGAGTCTGAGATTACTCAATATTTTAG
GGCCGCCATATCTTGTACCGAATATACTGACGCAAAGCACAATACTGAAATCGCCGTGAAAGCTATGGAAGATTACTGTA
TTGCTCAGGGGTGGGATGCGGATCGCTGCCAGCTAACGCGAGACAGGCTTTACAATTTCTGCAATGAACGGAAGCAAGAG
GAAGCTCCGGTAAACCTGACTGCTCTTTCTGCGCATATAAATGAGCAAGATCCAGAAGGATTTGTGCAGTACGTCAGGGA
AAACAACTATGAAGTAAGTGAGATTTTCTCTCCAAACCCTGCAACTTATAAGAAACTCATGCGCGTAAGTCGCCGCTTTG
GATCAATTAGCGTGAGTTTTGATGTGAACGATCTGCGGACCGAAACTGTATATTATGACTCAGACGCCGACTCAATTATA
ATTAAACGCCCTCCAGTAGAGCTTGTTAGGGATATGAAAAAGGCTCTTGGGGAATTAGATGATGCCGAAGAGCAGGCTTG
A

Upstream 100 bases:

>100_bases
TATAGGTGACCTTGATCGTAGGCTCTGGACTCCAGTTCAAGGTGGTCAAAGGTCGCCAAACGACCAGGCCCACTAAATTA
AGCAAGGAGCATATATAGCG

Downstream 100 bases:

>100_bases
AATATCAGCAGAGTCATATAGATCTCTCAGCGAAGGAGAGGTATCGCGTGGGCGCGTAAGTGGCACTGCGACAGAGCCGG
ATTTCTCTAAAATCACTGAA

Product: 37kDa nucleoid-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFGQGPAHPFPNIMLDYSSEGSD
IIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWLLIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIE
KWQSNQQPYLSFIKRRAGESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERKQE
EAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISVSFDVNDLRTETVYYDSDADSII
IKRPPVELVRDMKKALGELDDAEEQA

Sequences:

>Translated_346_residues
MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFGQGPAHPFPNIMLDYSSEGSD
IIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWLLIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIE
KWQSNQQPYLSFIKRRAGESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERKQE
EAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISVSFDVNDLRTETVYYDSDADSII
IKRPPVELVRDMKKALGELDDAEEQA
>Mature_346_residues
MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFGQGPAHPFPNIMLDYSSEGSD
IIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWLLIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIE
KWQSNQQPYLSFIKRRAGESEITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERKQE
EAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISVSFDVNDLRTETVYYDSDADSII
IKRPPVELVRDMKKALGELDDAEEQA

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=340, Percent_Identity=24.4117647058824, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 39517; Mature: 39517

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFG
CCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
QGPAHPFPNIMLDYSSEGSDIIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWL
CCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCEE
LIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIEKWQSNQQPYLSFIKRRAGES
EHEEHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCHH
EITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERKQE
HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
EAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISVSF
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEHCCCCCHHHHHHHHHHHHHHCCEEEEE
DVNDLRTETVYYDSDADSIIIKRPPVELVRDMKKALGELDDAEEQA
EHHHCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MDIRESIIHGVLKAKETNGSDSITMRRRPVILPLDDRLNTLCTDVLALYTKLSNGYGTFG
CCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
QGPAHPFPNIMLDYSSEGSDIIEFSNTACDLIAARMKDQFMATTSWPLFVRYTNQGRDWL
CCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCEE
LIAMLKLKEGVGIDEETLDLNNSLSFDISHLHEAARIDIEKWQSNQQPYLSFIKRRAGES
EHEEHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCHH
EITQYFRAAISCTEYTDAKHNTEIAVKAMEDYCIAQGWDADRCQLTRDRLYNFCNERKQE
HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
EAPVNLTALSAHINEQDPEGFVQYVRENNYEVSEIFSPNPATYKKLMRVSRRFGSISVSF
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEHCCCCCHHHHHHHHHHHHHHCCEEEEE
DVNDLRTETVYYDSDADSIIIKRPPVELVRDMKKALGELDDAEEQA
EHHHCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA