| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459273
Identifier: 77459273
GI number: 77459273
Start: 3492637
End: 3493866
Strand: Reverse
Name: 77459273
Synonym: Pfl01_3051
Alternate gene names: NA
Gene position: 3493866-3492637 (Counterclockwise)
Preceding gene: 77459274
Following gene: 77459272
Centisome position: 54.27
GC content: 40.65
Gene sequence:
>1230_bases ATGCCGAAGAGCAGGCTTGAAATATCAGCAGAGTCATATAGATCTCTCAGCGAAGGAGAGGTATCGCGTGGGCGCGTAAG TGGCACTGCGACAGAGCCGGATTTCTCTAAAATCACTGAAAGTCTGGAGCAGGCAGGACTACTGATTTCTTCAAATTCAG AGACTGGTGCAATAACTTTCAGCGCGCCTTCTGCAAGTGACGAGTACTTTGCACAATCACTGACGGATCTAATCACAGGC GCTACTAGGAAAAAGAAATGCCCAACAGAATTCTACATTGCGGACCTTAACTATCTCTATTGCTCGACTGATGTGGATAG ACATCCGACTGTCCAAGCCTATTTGGACACGGTATTTCTTGTAGAGTCATTGAGCAAACTCGCGGAGCATGGCACGGAAC CGAGATCAACGAAACTCATATTTTTTCACAAAGAAAAAATTGTAATTAATATAGATTATGAAGCGGATAGAATAAAGCCA ATTCCTGGCTTGCGAGAATTCACAGAGCGATATATAACTGACGAGATTCATGCAGAACAAAAGAAAACAATCATAAAGTC TGTGCTTCTTGAGCTATCCAAGGAGTTTGAAGGCGGTCTTTTGGATGTAGGACTCTTAAACGAAAAATTTGAAGAATTCA AGCGTCGTGTGTCATCTGGATATCAGCTCTATGTTTCAGAGTTTTCATTTCAAAAAATAAAAGCAGAAATTGAAAAAAGC AAATTTGAATTTGTAACAAAAATAAATAAAGTTTTTTCTGATATTCAAAATCAGCTACTTACTGTGCCTGCCGCACTAAT AATAGCTGGAAGCCAGTTCGAATCGTCCGACCATGTAACGCTGAAAAACTTCTTGATATTGTCAGGAGCCTTGGCCTTCA CATTGTTCATGCTGCTACTAATAATGAATCAGCGCAATACTCTACAGTCAATATATAATGAGATTGACAACGAGTGGGGG CTGATCAAGAAAAAGCATAACGCCATAAAAGATCAGTTTGACACTCAATATAAGTCTCTAGAGGCAAGGTACAAGCATCA ATTTCTACTGCTTGAGGTTGTGGCTCTTATAGTGGTGTTGGCATGCATGGCAACCATCCTTATGTTTAGTTACAACTCCG CAAGCCAAATGGTTTCCGTAGAGTTAGCAATGTTTTTGGGGTTTGTGCTGATTGTTTACATAGCGAGCAGGGTTCACACC ATTTTATCAAAAGTGCTTTTTCCCAAGTGA
Upstream 100 bases:
>100_bases GAAACTGTATATTATGACTCAGACGCCGACTCAATTATAATTAAACGCCCTCCAGTAGAGCTTGTTAGGGATATGAAAAA GGCTCTTGGGGAATTAGATG
Downstream 100 bases:
>100_bases ATTTTAAGCAGGCGCGGTAGTGTTCATAGCGGGCTCTCAAGCCCAGCAATTTTGAGCGATAGTAACCTATCAATCGCTTC GCCGATTGCGATTTTGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPKSRLEISAESYRSLSEGEVSRGRVSGTATEPDFSKITESLEQAGLLISSNSETGAITFSAPSASDEYFAQSLTDLITG ATRKKKCPTEFYIADLNYLYCSTDVDRHPTVQAYLDTVFLVESLSKLAEHGTEPRSTKLIFFHKEKIVINIDYEADRIKP IPGLREFTERYITDEIHAEQKKTIIKSVLLELSKEFEGGLLDVGLLNEKFEEFKRRVSSGYQLYVSEFSFQKIKAEIEKS KFEFVTKINKVFSDIQNQLLTVPAALIIAGSQFESSDHVTLKNFLILSGALAFTLFMLLLIMNQRNTLQSIYNEIDNEWG LIKKKHNAIKDQFDTQYKSLEARYKHQFLLLEVVALIVVLACMATILMFSYNSASQMVSVELAMFLGFVLIVYIASRVHT ILSKVLFPK
Sequences:
>Translated_409_residues MPKSRLEISAESYRSLSEGEVSRGRVSGTATEPDFSKITESLEQAGLLISSNSETGAITFSAPSASDEYFAQSLTDLITG ATRKKKCPTEFYIADLNYLYCSTDVDRHPTVQAYLDTVFLVESLSKLAEHGTEPRSTKLIFFHKEKIVINIDYEADRIKP IPGLREFTERYITDEIHAEQKKTIIKSVLLELSKEFEGGLLDVGLLNEKFEEFKRRVSSGYQLYVSEFSFQKIKAEIEKS KFEFVTKINKVFSDIQNQLLTVPAALIIAGSQFESSDHVTLKNFLILSGALAFTLFMLLLIMNQRNTLQSIYNEIDNEWG LIKKKHNAIKDQFDTQYKSLEARYKHQFLLLEVVALIVVLACMATILMFSYNSASQMVSVELAMFLGFVLIVYIASRVHT ILSKVLFPK >Mature_408_residues PKSRLEISAESYRSLSEGEVSRGRVSGTATEPDFSKITESLEQAGLLISSNSETGAITFSAPSASDEYFAQSLTDLITGA TRKKKCPTEFYIADLNYLYCSTDVDRHPTVQAYLDTVFLVESLSKLAEHGTEPRSTKLIFFHKEKIVINIDYEADRIKPI PGLREFTERYITDEIHAEQKKTIIKSVLLELSKEFEGGLLDVGLLNEKFEEFKRRVSSGYQLYVSEFSFQKIKAEIEKSK FEFVTKINKVFSDIQNQLLTVPAALIIAGSQFESSDHVTLKNFLILSGALAFTLFMLLLIMNQRNTLQSIYNEIDNEWGL IKKKHNAIKDQFDTQYKSLEARYKHQFLLLEVVALIVVLACMATILMFSYNSASQMVSVELAMFLGFVLIVYIASRVHTI LSKVLFPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46344; Mature: 46213
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSRLEISAESYRSLSEGEVSRGRVSGTATEPDFSKITESLEQAGLLISSNSETGAITF CCCCHHEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEE SAPSASDEYFAQSLTDLITGATRKKKCPTEFYIADLNYLYCSTDVDRHPTVQAYLDTVFL ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHH VESLSKLAEHGTEPRSTKLIFFHKEKIVINIDYEADRIKPIPGLREFTERYITDEIHAEQ HHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKTIIKSVLLELSKEFEGGLLDVGLLNEKFEEFKRRVSSGYQLYVSEFSFQKIKAEIEKS HHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH KFEFVTKINKVFSDIQNQLLTVPAALIIAGSQFESSDHVTLKNFLILSGALAFTLFMLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IMNQRNTLQSIYNEIDNEWGLIKKKHNAIKDQFDTQYKSLEARYKHQFLLLEVVALIVVL HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACMATILMFSYNSASQMVSVELAMFLGFVLIVYIASRVHTILSKVLFPK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKSRLEISAESYRSLSEGEVSRGRVSGTATEPDFSKITESLEQAGLLISSNSETGAITF CCCHHEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEE SAPSASDEYFAQSLTDLITGATRKKKCPTEFYIADLNYLYCSTDVDRHPTVQAYLDTVFL ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHH VESLSKLAEHGTEPRSTKLIFFHKEKIVINIDYEADRIKPIPGLREFTERYITDEIHAEQ HHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKTIIKSVLLELSKEFEGGLLDVGLLNEKFEEFKRRVSSGYQLYVSEFSFQKIKAEIEKS HHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH KFEFVTKINKVFSDIQNQLLTVPAALIIAGSQFESSDHVTLKNFLILSGALAFTLFMLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IMNQRNTLQSIYNEIDNEWGLIKKKHNAIKDQFDTQYKSLEARYKHQFLLLEVVALIVVL HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACMATILMFSYNSASQMVSVELAMFLGFVLIVYIASRVHTILSKVLFPK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA