Click here to switch to the map view.

The map label for this gene is fimA [C]

Identifier: 77459259

GI number: 77459259

Start: 3473891

End: 3474946

Strand: Direct

Name: fimA [C]

Synonym: Pfl01_3037

Alternate gene names: 77459259

Gene position: 3473891-3474946 (Clockwise)

Preceding gene: 77459256

Following gene: 77459260

Centisome position: 53.96

GC content: 50.28

Gene sequence:

>1056_bases
GTGTCGCGGCTAACGTACGCAGCTCATTGGCCGATACGTAAAGCCCTCTTCATGAAGCGTTTCCAGCCCCAGCGCCCTAC
CCCGATCACGAAATTGATTCACACGCTGTGCCTGACGCTGCTCTTCGCGTCCAGCTACGCTGGCGCGGCTAATTGCTCGT
TCTACCCAAAACATCATCAAACAATTCTCACTATGCAAGTACCCGCTACACTTTCCATTCCTCGTGACACACCTAACGGC
ACCTTAATATATGAAAGTCCGCCAATCACACTCGGCCCTACGCCCAGCTCATACAAATGCACTAACGAGTTTTCATATGG
TGTTTTGAACAGCGTCGGCGTGTCTAAATCGGGCGACCTTGTTTACGCGATAGGAAACACTGGACTTGCATGGCAGTGGT
CTTTCAAAGACAACATAACCATACCCATTTATCCAGGCATTCAGCGGGAAGCGGGCGGATACGGATGGGACACCACAAGA
CATGTGCTACGACTATTCAAAATAGCGGATGTAATCGATGTACAGAAAATCCCGGCAGGAACACTTGGGACTTTTCATGC
AGATGGAGTGTCACCACTCGCAATGGCGACCAATGGCACAACGATTGTGCCTCAATCCTGTGAAACGCCTGACATCAAAG
TAGACATGGGGGCGCATGACATGAGTAGCTTTGGCCAAAACGGCGCCTATTCTGAGCCGATCAAATTTGACATCAACCTT
AACAACTGTCCGTCAGGCATAAATAAAGTAACTTATATGCTCAAGCCTACCCTGACGTCTCCTTCGCAAAACTCCACGAG
GGGCATCGTAAAGTTGAGTGCAGATTCAACTGCCCAGGGTGTGGCTTTGCAAATACTCAATAGTGATGGGACCCCGCTCG
TTTTACATCAAAGCTATGTGTTCACGGACTATCCCGCTGCGGGAGGTAACTTGAAGATCCCCCTCAGCGCTCGATACTTT
CGCATCGCTGAAACAGCTGGCAATGGCGGGTTTGACAAGGGCATGCGCGCCGGAACAGCCAACGCAACAATTGCCTTTGT
CATGAGTTACTTGTGA

Upstream 100 bases:

>100_bases
GAAAAACGCAGTCAAAGCGGGAGCGAGCCTTGCTCGCGAACGCGGTAACACGGTGCAAGGGACGATTGCTTTCTAAGAAT
TGCCTGATGTCCAGCGTTGA

Downstream 100 bases:

>100_bases
ATCCATTAACGCGTTGCCACAGCCGATTGTTCGCGCCCCATCTTTAGGAATCGTCTGATTTTCGTCGTGCCCGGCCCGCC
CTACTGTGCCGGGATGCGCT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSRLTYAAHWPIRKALFMKRFQPQRPTPITKLIHTLCLTLLFASSYAGAANCSFYPKHHQTILTMQVPATLSIPRDTPNG
TLIYESPPITLGPTPSSYKCTNEFSYGVLNSVGVSKSGDLVYAIGNTGLAWQWSFKDNITIPIYPGIQREAGGYGWDTTR
HVLRLFKIADVIDVQKIPAGTLGTFHADGVSPLAMATNGTTIVPQSCETPDIKVDMGAHDMSSFGQNGAYSEPIKFDINL
NNCPSGINKVTYMLKPTLTSPSQNSTRGIVKLSADSTAQGVALQILNSDGTPLVLHQSYVFTDYPAAGGNLKIPLSARYF
RIAETAGNGGFDKGMRAGTANATIAFVMSYL

Sequences:

>Translated_351_residues
MSRLTYAAHWPIRKALFMKRFQPQRPTPITKLIHTLCLTLLFASSYAGAANCSFYPKHHQTILTMQVPATLSIPRDTPNG
TLIYESPPITLGPTPSSYKCTNEFSYGVLNSVGVSKSGDLVYAIGNTGLAWQWSFKDNITIPIYPGIQREAGGYGWDTTR
HVLRLFKIADVIDVQKIPAGTLGTFHADGVSPLAMATNGTTIVPQSCETPDIKVDMGAHDMSSFGQNGAYSEPIKFDINL
NNCPSGINKVTYMLKPTLTSPSQNSTRGIVKLSADSTAQGVALQILNSDGTPLVLHQSYVFTDYPAAGGNLKIPLSARYF
RIAETAGNGGFDKGMRAGTANATIAFVMSYL
>Mature_350_residues
SRLTYAAHWPIRKALFMKRFQPQRPTPITKLIHTLCLTLLFASSYAGAANCSFYPKHHQTILTMQVPATLSIPRDTPNGT
LIYESPPITLGPTPSSYKCTNEFSYGVLNSVGVSKSGDLVYAIGNTGLAWQWSFKDNITIPIYPGIQREAGGYGWDTTRH
VLRLFKIADVIDVQKIPAGTLGTFHADGVSPLAMATNGTTIVPQSCETPDIKVDMGAHDMSSFGQNGAYSEPIKFDINLN
NCPSGINKVTYMLKPTLTSPSQNSTRGIVKLSADSTAQGVALQILNSDGTPLVLHQSYVFTDYPAAGGNLKIPLSARYFR
IAETAGNGGFDKGMRAGTANATIAFVMSYL

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs. [C]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbria [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37939; Mature: 37808

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLTYAAHWPIRKALFMKRFQPQRPTPITKLIHTLCLTLLFASSYAGAANCSFYPKHHQ
CCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TILTMQVPATLSIPRDTPNGTLIYESPPITLGPTPSSYKCTNEFSYGVLNSVGVSKSGDL
EEEEEECCEEEECCCCCCCCEEEECCCCEEECCCCCCCEECCCCCCCCHHHCCCCCCCCE
VYAIGNTGLAWQWSFKDNITIPIYPGIQREAGGYGWDTTRHVLRLFKIADVIDVQKIPAG
EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TLGTFHADGVSPLAMATNGTTIVPQSCETPDIKVDMGAHDMSSFGQNGAYSEPIKFDINL
CCCEEECCCCCCEEEECCCCEEECCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEC
NNCPSGINKVTYMLKPTLTSPSQNSTRGIVKLSADSTAQGVALQILNSDGTPLVLHQSYV
CCCCCCHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEE
FTDYPAAGGNLKIPLSARYFRIAETAGNGGFDKGMRAGTANATIAFVMSYL
EEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SRLTYAAHWPIRKALFMKRFQPQRPTPITKLIHTLCLTLLFASSYAGAANCSFYPKHHQ
CCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TILTMQVPATLSIPRDTPNGTLIYESPPITLGPTPSSYKCTNEFSYGVLNSVGVSKSGDL
EEEEEECCEEEECCCCCCCCEEEECCCCEEECCCCCCCEECCCCCCCCHHHCCCCCCCCE
VYAIGNTGLAWQWSFKDNITIPIYPGIQREAGGYGWDTTRHVLRLFKIADVIDVQKIPAG
EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TLGTFHADGVSPLAMATNGTTIVPQSCETPDIKVDMGAHDMSSFGQNGAYSEPIKFDINL
CCCEEECCCCCCEEEECCCCEEECCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEC
NNCPSGINKVTYMLKPTLTSPSQNSTRGIVKLSADSTAQGVALQILNSDGTPLVLHQSYV
CCCCCCHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEE
FTDYPAAGGNLKIPLSARYFRIAETAGNGGFDKGMRAGTANATIAFVMSYL
EEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA