Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459256

Identifier: 77459256

GI number: 77459256

Start: 3471454

End: 3473181

Strand: Direct

Name: 77459256

Synonym: Pfl01_3034

Alternate gene names: NA

Gene position: 3471454-3473181 (Clockwise)

Preceding gene: 77459255

Following gene: 77459259

Centisome position: 53.92

GC content: 56.13

Gene sequence:

>1728_bases
ATGCTCAGTCTGTTTCGCCACAAAAGGCAGAAGCCCCCTCCGCCACCGACCGTCAACGTCGCCGAAGGTTACCTGTCCAT
CGAGTCAGCCCATACCCTCTTAGCAGTGGAGCACCGCCGTCAGTTGCTCGATCGCATCTGGCAATGCACCGCCCTCTCCC
ACGTCCAATTCACCCAGTTCTACTTAAATCCGATCCATCGCTACGCCGAACAGGTCCAGCAACTCCCGGCCAGCGAGACG
CACCACCATGCGTATCTCGGTGGCATGCTCGACCATGGCCTGGAGCTGGTCGCTTGCAGTTTGAAACTGCGTCAGTCATA
TCTGCTTCCCACCGGCGCTGCGCCCGAAGACCAGGCCGCCCAGACTGACGCCTGGTCCGCCGGCATCGCCTATGGCGCGC
TGCTGCATGACATTGGCAAGATCGCCGTGGACCTGCTGGTCGAACGCCAGGATGGCCGTGTTTGGCATCCTTGGCAGGGC
TCCCTGGATCAGCCCTACCGTTTTCGTTACATCAAGGGTCGTGACTACCACCTGCACGGCGCTGCCGCAGGCTTGCTTTA
CACCCAAATTCTCGACCGCCCAATCCTCGATTGGCTCAGTGGATTTCCGCCACTGTGGGCCAGTCTGCTGTATGTCCTGG
CGGGCCAGTACGAACGTGCCGGCGTGCTCGGTGAGTTGGTGATGCAGGCCGACCGTGTTTCCACCGCACAGAACATCGGA
GGTAACCCGAGCAAGGCGCTGCAAGCGCCGATTCATTCGCTGCAACATCACTTGATCAGCGGACTACGTCATCTGGTTCA
GCACGAGCTGAAACTCAACCAGCCAGGTGCCGCGGGTTGGTTGACTCAAGACGCACTCTGGCTGGTCAGCAAGACGGTCA
CGGACAAGCTGCGAGCCTATCTGCTGTCGCAATCGATTGAGGGCATTCCTTCATCCAACATCACGGTGTTCGACGAACTC
CAGTCGCATGGGCTGGTCGAGTCTACCCCGGAAGGCAAAGCCATCTGGACCGCGCTCGTTGCGCAGGGAAACTGGCAGCA
GAGTTTTACTTTTCTGCGCCTTCAACCGGCGTTGATCTGGGGGAGCGACAACCGACCTGAGGTTTTCAGCGGAACGGTAA
GCGTGGCAGTCGATGACCATCCAACTGACGCATCGGCATCACCAGCAGCGCCCAAGACTGTCAGTACAGAATCGTGTCAA
AGCCCATCGCAGCCCGAGCCACTGCAGATGGAGGATGCCGACTGCCTCGGATCTTTGCTGGATATGTTCGAAATAGGAGA
ACCCGAGGTGCGTGAAACGCCCTCAGAAAATGCTCTCGAAGTCTTAAGCTCCCCTTCGGACAACCCAGGTCAGGTTTTCC
TGAATTGGGTCAAGGAAGGCATCCAGAGCCACAAGCTGATCATCAACGACGGCAAGGCTAAAATACACACGGTGAGCGGT
ACTGTATTTCTTGTAACACCGGGTCTTTTCCAACGTTATGCCCAGGAGTTTCCTGGCATCTCCAAGGGTGTCGATCAAGA
GATTGAAGAATGGCGTTGGGTGCAGAAGCAGTTCGAGAAATTGAAGATCCATAGAAAACGCACTGATGGTTTGAACATCT
GGTCTTGTCAGGTCGAAGGCCCTCGAAAGAAGGCAAAACTCAAAGGTTATCTGCTAGAAAACCGGACACTTTTGCTCGAC
ACGGGATCGGTAGTCGACAATCCTTTTCTAAAAATCGAAATAGATTAA

Upstream 100 bases:

>100_bases
AAGGACGGGTAAGGGTTGGAAGGGAATGGGCACTCAAGGGTAAGAGCGCTATCCGAAAAGGCTAAAAGGCCACTGACCCA
GCCACTTCCCGGAGGTCACG

Downstream 100 bases:

>100_bases
ATATCGATAGAGGTCCAGAGCTACTGCCAGCGAAAGAGTTTGAAAAGCGTTACTCATCCATAGAGAGTAGTTACGAAGCG
GAAATGCCTGAGCTGACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; Truncated TraI; Nickase; Type IV Secretion-Like Conjugative Relaxase TraI; Relaxase-Related Protein; Metal Dependent Phosphohydrolase; Conjugal Transfer Protein Tral; Plasmid Conjugative Relaxase; Helicase/Relaxase; DNA Helicase; HD-Superfamily Hydrolase; Type IV Conjugative Transfer System Protein TraI

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MLSLFRHKRQKPPPPPTVNVAEGYLSIESAHTLLAVEHRRQLLDRIWQCTALSHVQFTQFYLNPIHRYAEQVQQLPASET
HHHAYLGGMLDHGLELVACSLKLRQSYLLPTGAAPEDQAAQTDAWSAGIAYGALLHDIGKIAVDLLVERQDGRVWHPWQG
SLDQPYRFRYIKGRDYHLHGAAAGLLYTQILDRPILDWLSGFPPLWASLLYVLAGQYERAGVLGELVMQADRVSTAQNIG
GNPSKALQAPIHSLQHHLISGLRHLVQHELKLNQPGAAGWLTQDALWLVSKTVTDKLRAYLLSQSIEGIPSSNITVFDEL
QSHGLVESTPEGKAIWTALVAQGNWQQSFTFLRLQPALIWGSDNRPEVFSGTVSVAVDDHPTDASASPAAPKTVSTESCQ
SPSQPEPLQMEDADCLGSLLDMFEIGEPEVRETPSENALEVLSSPSDNPGQVFLNWVKEGIQSHKLIINDGKAKIHTVSG
TVFLVTPGLFQRYAQEFPGISKGVDQEIEEWRWVQKQFEKLKIHRKRTDGLNIWSCQVEGPRKKAKLKGYLLENRTLLLD
TGSVVDNPFLKIEID

Sequences:

>Translated_575_residues
MLSLFRHKRQKPPPPPTVNVAEGYLSIESAHTLLAVEHRRQLLDRIWQCTALSHVQFTQFYLNPIHRYAEQVQQLPASET
HHHAYLGGMLDHGLELVACSLKLRQSYLLPTGAAPEDQAAQTDAWSAGIAYGALLHDIGKIAVDLLVERQDGRVWHPWQG
SLDQPYRFRYIKGRDYHLHGAAAGLLYTQILDRPILDWLSGFPPLWASLLYVLAGQYERAGVLGELVMQADRVSTAQNIG
GNPSKALQAPIHSLQHHLISGLRHLVQHELKLNQPGAAGWLTQDALWLVSKTVTDKLRAYLLSQSIEGIPSSNITVFDEL
QSHGLVESTPEGKAIWTALVAQGNWQQSFTFLRLQPALIWGSDNRPEVFSGTVSVAVDDHPTDASASPAAPKTVSTESCQ
SPSQPEPLQMEDADCLGSLLDMFEIGEPEVRETPSENALEVLSSPSDNPGQVFLNWVKEGIQSHKLIINDGKAKIHTVSG
TVFLVTPGLFQRYAQEFPGISKGVDQEIEEWRWVQKQFEKLKIHRKRTDGLNIWSCQVEGPRKKAKLKGYLLENRTLLLD
TGSVVDNPFLKIEID
>Mature_575_residues
MLSLFRHKRQKPPPPPTVNVAEGYLSIESAHTLLAVEHRRQLLDRIWQCTALSHVQFTQFYLNPIHRYAEQVQQLPASET
HHHAYLGGMLDHGLELVACSLKLRQSYLLPTGAAPEDQAAQTDAWSAGIAYGALLHDIGKIAVDLLVERQDGRVWHPWQG
SLDQPYRFRYIKGRDYHLHGAAAGLLYTQILDRPILDWLSGFPPLWASLLYVLAGQYERAGVLGELVMQADRVSTAQNIG
GNPSKALQAPIHSLQHHLISGLRHLVQHELKLNQPGAAGWLTQDALWLVSKTVTDKLRAYLLSQSIEGIPSSNITVFDEL
QSHGLVESTPEGKAIWTALVAQGNWQQSFTFLRLQPALIWGSDNRPEVFSGTVSVAVDDHPTDASASPAAPKTVSTESCQ
SPSQPEPLQMEDADCLGSLLDMFEIGEPEVRETPSENALEVLSSPSDNPGQVFLNWVKEGIQSHKLIINDGKAKIHTVSG
TVFLVTPGLFQRYAQEFPGISKGVDQEIEEWRWVQKQFEKLKIHRKRTDGLNIWSCQVEGPRKKAKLKGYLLENRTLLLD
TGSVVDNPFLKIEID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64092; Mature: 64092

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLFRHKRQKPPPPPTVNVAEGYLSIESAHTLLAVEHRRQLLDRIWQCTALSHVQFTQF
CCCHHHHHCCCCCCCCCCCHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLNPIHRYAEQVQQLPASETHHHAYLGGMLDHGLELVACSLKLRQSYLLPTGAAPEDQAA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
QTDAWSAGIAYGALLHDIGKIAVDLLVERQDGRVWHPWQGSLDQPYRFRYIKGRDYHLHG
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCEEEEEECCCCEEECH
AAAGLLYTQILDRPILDWLSGFPPLWASLLYVLAGQYERAGVLGELVMQADRVSTAQNIG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GNPSKALQAPIHSLQHHLISGLRHLVQHELKLNQPGAAGWLTQDALWLVSKTVTDKLRAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLSQSIEGIPSSNITVFDELQSHGLVESTPEGKAIWTALVAQGNWQQSFTFLRLQPALIW
HHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHCEEEEEEEEEEEE
GSDNRPEVFSGTVSVAVDDHPTDASASPAAPKTVSTESCQSPSQPEPLQMEDADCLGSLL
CCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DMFEIGEPEVRETPSENALEVLSSPSDNPGQVFLNWVKEGIQSHKLIINDGKAKIHTVSG
HHHHCCCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECC
TVFLVTPGLFQRYAQEFPGISKGVDQEIEEWRWVQKQFEKLKIHRKRTDGLNIWSCQVEG
EEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PRKKAKLKGYLLENRTLLLDTGSVVDNPFLKIEID
CHHHHHHHEEEEECCEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MLSLFRHKRQKPPPPPTVNVAEGYLSIESAHTLLAVEHRRQLLDRIWQCTALSHVQFTQF
CCCHHHHHCCCCCCCCCCCHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLNPIHRYAEQVQQLPASETHHHAYLGGMLDHGLELVACSLKLRQSYLLPTGAAPEDQAA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
QTDAWSAGIAYGALLHDIGKIAVDLLVERQDGRVWHPWQGSLDQPYRFRYIKGRDYHLHG
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCEEEEEECCCCEEECH
AAAGLLYTQILDRPILDWLSGFPPLWASLLYVLAGQYERAGVLGELVMQADRVSTAQNIG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GNPSKALQAPIHSLQHHLISGLRHLVQHELKLNQPGAAGWLTQDALWLVSKTVTDKLRAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLSQSIEGIPSSNITVFDELQSHGLVESTPEGKAIWTALVAQGNWQQSFTFLRLQPALIW
HHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHCEEEEEEEEEEEE
GSDNRPEVFSGTVSVAVDDHPTDASASPAAPKTVSTESCQSPSQPEPLQMEDADCLGSLL
CCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DMFEIGEPEVRETPSENALEVLSSPSDNPGQVFLNWVKEGIQSHKLIINDGKAKIHTVSG
HHHHCCCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECC
TVFLVTPGLFQRYAQEFPGISKGVDQEIEEWRWVQKQFEKLKIHRKRTDGLNIWSCQVEG
EEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PRKKAKLKGYLLENRTLLLDTGSVVDNPFLKIEID
CHHHHHHHEEEEECCEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA