| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459242
Identifier: 77459242
GI number: 77459242
Start: 3456658
End: 3457464
Strand: Direct
Name: 77459242
Synonym: Pfl01_3020
Alternate gene names: NA
Gene position: 3456658-3457464 (Clockwise)
Preceding gene: 77459241
Following gene: 77459243
Centisome position: 53.69
GC content: 62.21
Gene sequence:
>807_bases ATGTCTACCCTGGGACTCACCGTCGCACTGATGCTATGGGGAGCTGCAGCGCAGGCCGTCGAGCTAATGCACTGGGAACG CCTACCCCTCGCGGTCCCTCTGGTGATCAATCAGGAACGGGTGGTCTTTGTCGATGAGAATGTTCGAGTCGGCGTGCCCT CAACCCTGACAGGTAAGCTGCGCGTACAATCAACTGGCGGCACGCTGTACCTGCGCGCGTCGGAATCCATTGCCCCGACC CGACTGCAACTGCAATCGGTCACGACGGGTGAAATCATCCTGCTGGATATCGCGGCCACGCCTGGTGATCAACCGCTGGA GCCCGTGCGTATTCTCAAGAACGCTCAGGAGCAAGCTGCCGAAGCTGTCTCTAGCACCGTCCCTGTTCCAGAACGTACAC CGATCCCGGTCGCTTTGACGCGCTACGCCGCGCAAAGCCTGTACGGGCCTCTGCGCACCGTGGAGTCTCTGCCCGGCGTA CGCCGCGTCCCGCTCAAGCTGCGCACCGAATTGCCGGCCCTGCTGCCGACCGAAAACGTGTCCAGCATGCCCATCGCCGC CTGGCGACTCGGTGATTACTGGGTGACGGCGGTGAAGTTGCGCAATCGTGGCTTAGAGACGGTGCAACTCGATCCGCGCC GGCTTCAGGCCAAGCTATTTGCCGCGGCCTTCCAGCATGCTTTCCTCGGACCTGTCGGCAGTGCTGAAGACACCACGATT GCCTACCTCGTCACCCGCGGTGCCGGCCTCGAACACGCGGTGCTATTACCTCCGCCCGTTGCGCGAGGTGCTAGCGATGA AAGCTAA
Upstream 100 bases:
>100_bases TCGACCAGGATCCCGAGCGCAATAAATGGGGGCTGGCACTGGATTGTTATCAGGGCACTCCGCAAAAAATCTCCCTGCCT GGAGGTGAGCCATGAAGCGG
Downstream 100 bases:
>100_bases CGCCTTGCTCAAATGGCTGGTACCGGCGGCGTTGTTGGCCGTGGTTTTGATCATCCTGAAAAGCTGGGTCGCGGGTAGTA CTCCCTCTCCAGAGCACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSTLGLTVALMLWGAAAQAVELMHWERLPLAVPLVINQERVVFVDENVRVGVPSTLTGKLRVQSTGGTLYLRASESIAPT RLQLQSVTTGEIILLDIAATPGDQPLEPVRILKNAQEQAAEAVSSTVPVPERTPIPVALTRYAAQSLYGPLRTVESLPGV RRVPLKLRTELPALLPTENVSSMPIAAWRLGDYWVTAVKLRNRGLETVQLDPRRLQAKLFAAAFQHAFLGPVGSAEDTTI AYLVTRGAGLEHAVLLPPPVARGASDES
Sequences:
>Translated_268_residues MSTLGLTVALMLWGAAAQAVELMHWERLPLAVPLVINQERVVFVDENVRVGVPSTLTGKLRVQSTGGTLYLRASESIAPT RLQLQSVTTGEIILLDIAATPGDQPLEPVRILKNAQEQAAEAVSSTVPVPERTPIPVALTRYAAQSLYGPLRTVESLPGV RRVPLKLRTELPALLPTENVSSMPIAAWRLGDYWVTAVKLRNRGLETVQLDPRRLQAKLFAAAFQHAFLGPVGSAEDTTI AYLVTRGAGLEHAVLLPPPVARGASDES >Mature_267_residues STLGLTVALMLWGAAAQAVELMHWERLPLAVPLVINQERVVFVDENVRVGVPSTLTGKLRVQSTGGTLYLRASESIAPTR LQLQSVTTGEIILLDIAATPGDQPLEPVRILKNAQEQAAEAVSSTVPVPERTPIPVALTRYAAQSLYGPLRTVESLPGVR RVPLKLRTELPALLPTENVSSMPIAAWRLGDYWVTAVKLRNRGLETVQLDPRRLQAKLFAAAFQHAFLGPVGSAEDTTIA YLVTRGAGLEHAVLLPPPVARGASDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28882; Mature: 28751
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLGLTVALMLWGAAAQAVELMHWERLPLAVPLVINQERVVFVDENVRVGVPSTLTGKL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEECCCCCEEEEE RVQSTGGTLYLRASESIAPTRLQLQSVTTGEIILLDIAATPGDQPLEPVRILKNAQEQAA EEEECCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH EAVSSTVPVPERTPIPVALTRYAAQSLYGPLRTVESLPGVRRVPLKLRTELPALLPTENV HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCCCCCC SSMPIAAWRLGDYWVTAVKLRNRGLETVQLDPRRLQAKLFAAAFQHAFLGPVGSAEDTTI CCCCEEEEECCCHHEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEE AYLVTRGAGLEHAVLLPPPVARGASDES EEEEECCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure STLGLTVALMLWGAAAQAVELMHWERLPLAVPLVINQERVVFVDENVRVGVPSTLTGKL CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEECCCCCEEEEE RVQSTGGTLYLRASESIAPTRLQLQSVTTGEIILLDIAATPGDQPLEPVRILKNAQEQAA EEEECCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH EAVSSTVPVPERTPIPVALTRYAAQSLYGPLRTVESLPGVRRVPLKLRTELPALLPTENV HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCCCCCC SSMPIAAWRLGDYWVTAVKLRNRGLETVQLDPRRLQAKLFAAAFQHAFLGPVGSAEDTTI CCCCEEEEECCCHHEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEE AYLVTRGAGLEHAVLLPPPVARGASDES EEEEECCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA