| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459241
Identifier: 77459241
GI number: 77459241
Start: 3456011
End: 3456652
Strand: Direct
Name: 77459241
Synonym: Pfl01_3019
Alternate gene names: NA
Gene position: 3456011-3456652 (Clockwise)
Preceding gene: 77459240
Following gene: 77459242
Centisome position: 53.68
GC content: 59.66
Gene sequence:
>642_bases ATGAGTCGCTTTCGGAACAAGGTCGATGCCCAACAGGCCCACATCGTCAGCCTGCGCCTGGCGGTAGTGATCCTCGCCCT GCTCTGTGCCGGACTCTGGTATGGCTGGCGCTCGGCACCGACCGATCTGACCGTGCATGTCCCCCCGGATCTGCGCTCGG GCAGCACTCGCAAGTGGTGGGATATCCCCTCGGAGAATGTGTATGCCTTTGCCCTGTACATCTTTGGTCAGCTCAACCGC TGGCCCTCAGATGGCGAGCAGGACTATCGCCGCGCCATCTATGGCTTGCAGTCCTACCTGACACCCTCCTGCAAGGCCTT CCTCGAAGGCGACTACGAATACCGCAAGGCCGCCGGCGAACTGCGCCAGCGGGTGCGTGGCGTCTACGAAATTCTGGGTC GAGGTTACAGTGAGGATCCGGAACTCAGGGTCAAGCAACTCGACCGCGACAGCTGGTTGGTCAAGCTCGACCTCAATGCC GATGAATATTACTCCGCGGAACCGGTGAAACGGGTGGTGGTGCGTTATCCATTACGCGTAGTGCGTTTCGACCAGGATCC CGAGCGCAATAAATGGGGGCTGGCACTGGATTGTTATCAGGGCACTCCGCAAAAAATCTCCCTGCCTGGAGGTGAGCCAT GA
Upstream 100 bases:
>100_bases GTCGTTGGCGCCTGGGGCGCGGAAGTTTGATTCTCCACTCTGGCGCCTGGACGGTTCGCCGTTCGCGTCGACTGCGCCCG GCCCTGTCCCGGTGGCAACT
Downstream 100 bases:
>100_bases AGCGGATGTCTACCCTGGGACTCACCGTCGCACTGATGCTATGGGGAGCTGCAGCGCAGGCCGTCGAGCTAATGCACTGG GAACGCCTACCCCTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSRFRNKVDAQQAHIVSLRLAVVILALLCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWWDIPSENVYAFALYIFGQLNR WPSDGEQDYRRAIYGLQSYLTPSCKAFLEGDYEYRKAAGELRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVKLDLNA DEYYSAEPVKRVVVRYPLRVVRFDQDPERNKWGLALDCYQGTPQKISLPGGEP
Sequences:
>Translated_213_residues MSRFRNKVDAQQAHIVSLRLAVVILALLCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWWDIPSENVYAFALYIFGQLNR WPSDGEQDYRRAIYGLQSYLTPSCKAFLEGDYEYRKAAGELRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVKLDLNA DEYYSAEPVKRVVVRYPLRVVRFDQDPERNKWGLALDCYQGTPQKISLPGGEP >Mature_212_residues SRFRNKVDAQQAHIVSLRLAVVILALLCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWWDIPSENVYAFALYIFGQLNRW PSDGEQDYRRAIYGLQSYLTPSCKAFLEGDYEYRKAAGELRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVKLDLNAD EYYSAEPVKRVVVRYPLRVVRFDQDPERNKWGLALDCYQGTPQKISLPGGEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24633; Mature: 24502
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFRNKVDAQQAHIVSLRLAVVILALLCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC DIPSENVYAFALYIFGQLNRWPSDGEQDYRRAIYGLQSYLTPSCKAFLEGDYEYRKAAGE CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH LRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVKLDLNADEYYSAEPVKRVVVRYPLRV HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEE VRFDQDPERNKWGLALDCYQGTPQKISLPGGEP EEECCCCCCCCCCEEEEECCCCCCEEECCCCCC >Mature Secondary Structure SRFRNKVDAQQAHIVSLRLAVVILALLCAGLWYGWRSAPTDLTVHVPPDLRSGSTRKWW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC DIPSENVYAFALYIFGQLNRWPSDGEQDYRRAIYGLQSYLTPSCKAFLEGDYEYRKAAGE CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH LRQRVRGVYEILGRGYSEDPELRVKQLDRDSWLVKLDLNADEYYSAEPVKRVVVRYPLRV HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEE VRFDQDPERNKWGLALDCYQGTPQKISLPGGEP EEECCCCCCCCCCEEEEECCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA