| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459235
Identifier: 77459235
GI number: 77459235
Start: 3452953
End: 3453684
Strand: Direct
Name: 77459235
Synonym: Pfl01_3013
Alternate gene names: NA
Gene position: 3452953-3453684 (Clockwise)
Preceding gene: 77459234
Following gene: 77459237
Centisome position: 53.63
GC content: 53.01
Gene sequence:
>732_bases ATGGCGACTTCCGCCCAGAACACGCCACCACAACCGATCCAGCGTCCAGGACTGATCATCTCGACGATCAGCCTGGTACT GCGCGTCATCGGTTTGCTGATCGCCTCGTTGCTGTTCTCGATCCTGATCGAGTTCGCTGGTTTGCTGCTGTTCTGGGGTG ATCAGGGCTGGCTGCATAGTCAGGCCATGCTAACCAGTGAATTAGGCTGGCTCAGCGAGCACTTCAAATCTTCACTTCTC ATCCAACAGCCTGGGCCAACGATTGTCCAGTGGCTGGATTTACTCAATCAGTGGCTACTGGTCAAAACTGGCTTTGCAGA TTTTGCCCAGCAGGCGCGGGTATCGAGCATGGGCAACAGCTTCTGGGGGTGGATCAATCAGTTTTACGTGAGCATTGAAG ATTTTGTGCTGGCGGCGGTGTATGTGACCTTTACCTTCATGGTGCGCCTGACCATTCTGGTCCTGGCCACACCCTTGTTT CTGCTGGCCTCTCTCACCGGTTTTATCGATGGTTTGATGCGTCGCGACCTGCGCAAATTTGGCGCGGGGCGAGAAAGCAG CTTTGTCTATCACCGCGCCAAGCGCGCAGTGATACCACTGCTGATCGTGCCCTGGATCATTTACCTATCCCTGCCCTTTT CGCTCAATCCTATGGTCGTATTTTTGCCTTGTGCTGTAATGCTTGGCATCACAGTAGCAATCACGGCAAGTACATTTAAG AAATATCTCTGA
Upstream 100 bases:
>100_bases GGTGGGGTAGCCCGCCCCTGCCACAGGTTTCAATTCAGCAGAAAACGATCAAGAAGGCGTCGTGCCCACATCAACTCTGC AGCGTGCAATGGAGTAAACG
Downstream 100 bases:
>100_bases CTCGGAAAAATTATATTTTCCCTTTAGATATCCCCTGGTATCAGGATCGTTATTCAGCGACTGCAGAACTGACACAGCGC ACGAGCTGACCTGCCCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHSQAMLTSELGWLSEHFKSSLL IQQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNSFWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLF LLASLTGFIDGLMRRDLRKFGAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFK KYL
Sequences:
>Translated_243_residues MATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHSQAMLTSELGWLSEHFKSSLL IQQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNSFWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLF LLASLTGFIDGLMRRDLRKFGAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFK KYL >Mature_242_residues ATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHSQAMLTSELGWLSEHFKSSLLI QQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNSFWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLFL LASLTGFIDGLMRRDLRKFGAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFKK YL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27213; Mature: 27082
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QAMLTSELGWLSEHFKSSLLIQQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNS HHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH FWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLFLLASLTGFIDGLMRRDLRKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KYL HCC >Mature Secondary Structure ATSAQNTPPQPIQRPGLIISTISLVLRVIGLLIASLLFSILIEFAGLLLFWGDQGWLHS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QAMLTSELGWLSEHFKSSLLIQQPGPTIVQWLDLLNQWLLVKTGFADFAQQARVSSMGNS HHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH FWGWINQFYVSIEDFVLAAVYVTFTFMVRLTILVLATPLFLLASLTGFIDGLMRRDLRKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGRESSFVYHRAKRAVIPLLIVPWIIYLSLPFSLNPMVVFLPCAVMLGITVAITASTFK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KYL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA