Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459234

Identifier: 77459234

GI number: 77459234

Start: 3450757

End: 3452862

Strand: Direct

Name: 77459234

Synonym: Pfl01_3012

Alternate gene names: NA

Gene position: 3450757-3452862 (Clockwise)

Preceding gene: 77459233

Following gene: 77459235

Centisome position: 53.6

GC content: 60.16

Gene sequence:

>2106_bases
ATGGCCGAGCATGCAATGGAGTCCAAGCTCCGGCCAGCGGTGGAGCTATACACCGTAGCGATCTGCATCGCTGCCGCGGT
GTTGTGCGTGTACTCGCCCTGGGCTGTGGCCCTGTCACCCGAGATCGGTCTGGTTGCAGCGCTGGCCTATGCCCTGTTCG
GCCTTATCCGGCTGCGACAAGCCTGGGAGGTGCTGCGTTATCGGCGCAATATCCGTCGGCTGCCCCGCTACGGGCTGACC
AGTCGGCAGATTCCGGTCAGCCGCAAGCGTCTGTTCATGGGCCGTGGCTTTCGCTGGACCCGCCTGCACACCCAACGTTT
GGTTGAGGCCCAGGATCCGGCGGTCGCCCACTATGTCGAGCAACCGACCCGTTACCGTCTGGCCCGAGGACTCGAACGCC
GCCTGGAACATGCACCGTTTCCGTTCTCGACACTGGCCCGTGCCACCGCCTGGGACAGCGCCTTCAATCCGTTGCGCCCT
TTGCCCCAAGTAGGTGGCTCGCCGCTGTTGCATGGGGTGGAGCCTGATGAAACAGAAGTCAGTCTACCGCTGGGCGAACG
GGTCGGTCACACCCTGGTGCTCGGCACTACCCGTGTCGGCAAGACGCGACTCGCCGAGGTGTATATCACCCAGGACATTC
ATCGCATCGAACATGAAGTGGTCATAGTCTTCGATCCGAAGGGCGATGCCGACCTGCTCAAACGGATGTACGTTGAAGCC
AAGCGGGCAGGTCGAGATAAGGAGTTTTATGTTTTCCATCTAGGCTGGCCGGAGATCTCCGCTCGATACAATGCGGTGGG
ACGCTTCGGGCGTATCTCGGAAGTGGCGTCACGCATCGCCGGGCAGCTCAGCGGCGAAGGTAACTCCGCGGCCTTTCGCG
AGTTTGCCTGGCGTTTCGTCAACATCATCGCCCGTGCCCTGATCGAGTTAGGCCGGCGTCCGGACTACTTGCAGATCCAA
CGGCATGTGGTCAACATCGACGCACTGTTCATCGAGTACGCCCAGCAGTTTTTCGCCAAGACCGACCCGAAGGCGTGGGA
GGTGATCGTTCAGCTCGAAGGCAAGCTCACCGAAAAGAACATTCCCCGGCATATGATCGGGCGCGAAAAGCGTGTGGTGG
CCATCGAACAGTACCTGGCGGTGAAGCGGGTATTTGATCCGGTCATGGACGGGCTGCGTTCGGCGGTACGATATGATCGT
ACTTACTTCGACAAAATCGTTGCCTCACTACTGCCGCTGCTGGAGAAACTCACCACCGGCAAGACCGCCCAACTGCTGGC
GCCAAACTACACCGACTTAGATGACCCGCGGCCAATCTTCGACTGGATGCAGATCATCCGAAAACGCGGCATCGTCTACG
TCGGTTTGGATGCTCTGACCGACGCCGAGGTGGCCGCCGCTGTGGGCAACTCCATGTTCGCCGACTTGGTCTCGGTCGCC
GGACACATTTACAAACACGGCATCGACCATGGCCTGCCCCCATCGGGTAACAGCAGTGACAAGTTGCCGATCAACCTGCA
CGCCGATGAGTTCAACGAGTTGATGGGGGATGAATTCATCCCGCTGATCAATAAGGGCGGCGGTGCCGGTATTCAGGTAA
CCGCCTACACCCAGACCCTCAGTGATATCGAAGCACGTATCGGCAACCGCGCCAAAGCTGGCCAGGTTATTGGCAACTTC
AACACCCTGCAGATGCTGCGGGTGCGCGAAACCGCCACCGCTGAACTGCTCACTCAGCAATTGCCCAAGGTCAACGTGCT
GACCAAGACCCTGGTGTCGGGTGCCACCGACACCTCCGATCCGGAAGCCCATACGGACTTCACTTCGTCCTCGCAGGACC
GCGTCAGCAGCACCAGCGTGCCGTTGATCGAGCCTGCCCACATCGTCAGTTTGCCCAAAGGGCAAATGTTCTCCTTCCAA
GCCGGTGGGCAGCTCTGGAAAGTCCGCATGCCCTTACCAAAACCCTCCAACGACGATGCCATGCCCAAGGACTTGCAGGA
GCTCACCCAGCGAATGCGGGCCACCTACAACACGCAGGCGGGGCAATGGTGGAGCGCCAGTGGTGGCGGCCCAACAACAA
ACTTCGATCTGGATCAGGTGGGGTAG

Upstream 100 bases:

>100_bases
CATCCTGCCGGTCAACGGTAACGACATCGCCACTCGCCTGCAGATCGAGCACTACCCCGTCTTGATCACTGCCACCTCAC
TGGAACAGTGAGTCCAGGTC

Downstream 100 bases:

>100_bases
CCCGCCCCTGCCACAGGTTTCAATTCAGCAGAAAACGATCAAGAAGGCGTCGTGCCCACATCAACTCTGCAGCGTGCAAT
GGAGTAAACGATGGCGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 701; Mature: 700

Protein sequence:

>701_residues
MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLT
SRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRP
LPQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA
KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQ
RHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDR
TYFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNF
NTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQ
AGGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG

Sequences:

>Translated_701_residues
MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLT
SRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRP
LPQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA
KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQ
RHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDR
TYFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNF
NTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQ
AGGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG
>Mature_700_residues
AEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLTS
RQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPL
PQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEAK
RAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQR
HVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRT
YFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVAG
HIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNFN
TLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQA
GGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78361; Mature: 78230

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQ
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
AWEVLRYRRNIRRLPRYGLTSRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVE
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHC
QPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPLPQVGGSPLLHGVEPDETEV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEE
SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA
ECCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV
HHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
IPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECHHHCHHHHHHHHHHHHHHHHHHHH
GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL
HHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEHHHHH
SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQAGGQLWKVRMPLPKPSNDDA
CCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEEECCCCCCCCCC
MPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG
CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
AEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQ
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
AWEVLRYRRNIRRLPRYGLTSRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVE
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHC
QPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPLPQVGGSPLLHGVEPDETEV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEE
SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA
ECCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV
HHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
IPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECHHHCHHHHHHHHHHHHHHHHHHHH
GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL
HHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEHHHHH
SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQAGGQLWKVRMPLPKPSNDDA
CCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEEECCCCCCCCCC
MPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG
CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA