| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459233
Identifier: 77459233
GI number: 77459233
Start: 3450232
End: 3450747
Strand: Direct
Name: 77459233
Synonym: Pfl01_3011
Alternate gene names: NA
Gene position: 3450232-3450747 (Clockwise)
Preceding gene: 77459232
Following gene: 77459234
Centisome position: 53.59
GC content: 57.95
Gene sequence:
>516_bases ATGACGCGAATATTCCTTATCTGCTATTTCATCCTGTTCTTGGCACCTGTCGCCCAGGCGAAACCAACCGTAGTCAGGGA TCCGGCTGGCGACGTCACCCAACCCTATTTCCAAGCTACGGGCCTGCCCATAAATAACAGAGTTCAGGCTGAACGGGCCG TGCATGCGGACCTGTCCACGTTTGCCGATGAAGGCTGGATACTGCCAATCAGTAGTTCTCGGTTGAGTCCCGGCCAAATC ACGCCTCGTGCCCTCAACATGCCTGGCTTGCGGCCATTTTTCTTGGTCGGTGACAATCCCCAATCACTGGTTTGGTTGCG TAAACGCGCGGCTGAACTGCACGAAATGGGCGCGGCCGGCCTCGCCGTCGAAGTGACCGACACCGAAGCGTTGGCCCGAA TTCGAGCAGCGGCTCCCGGCATCACCATCCTGCCGGTCAACGGTAACGACATCGCCACTCGCCTGCAGATCGAGCACTAC CCCGTCTTGATCACTGCCACCTCACTGGAACAGTGA
Upstream 100 bases:
>100_bases TTCACCGCCCGGCAGGAGGAACGCCGGCCGCGCGTTACCGCGCCGGATTTTCCCGGCAACTCGAACGGTTGCTGGTTTCC TTCAAACAGGGCACACCGCC
Downstream 100 bases:
>100_bases GTCCAGGTCATGGCCGAGCATGCAATGGAGTCCAAGCTCCGGCCAGCGGTGGAGCTATACACCGTAGCGATCTGCATCGC TGCCGCGGTGTTGTGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTRIFLICYFILFLAPVAQAKPTVVRDPAGDVTQPYFQATGLPINNRVQAERAVHADLSTFADEGWILPISSSRLSPGQI TPRALNMPGLRPFFLVGDNPQSLVWLRKRAAELHEMGAAGLAVEVTDTEALARIRAAAPGITILPVNGNDIATRLQIEHY PVLITATSLEQ
Sequences:
>Translated_171_residues MTRIFLICYFILFLAPVAQAKPTVVRDPAGDVTQPYFQATGLPINNRVQAERAVHADLSTFADEGWILPISSSRLSPGQI TPRALNMPGLRPFFLVGDNPQSLVWLRKRAAELHEMGAAGLAVEVTDTEALARIRAAAPGITILPVNGNDIATRLQIEHY PVLITATSLEQ >Mature_170_residues TRIFLICYFILFLAPVAQAKPTVVRDPAGDVTQPYFQATGLPINNRVQAERAVHADLSTFADEGWILPISSSRLSPGQIT PRALNMPGLRPFFLVGDNPQSLVWLRKRAAELHEMGAAGLAVEVTDTEALARIRAAAPGITILPVNGNDIATRLQIEHYP VLITATSLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18625; Mature: 18494
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIFLICYFILFLAPVAQAKPTVVRDPAGDVTQPYFQATGLPINNRVQAERAVHADLST CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH FADEGWILPISSSRLSPGQITPRALNMPGLRPFFLVGDNPQSLVWLRKRAAELHEMGAAG HCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC LAVEVTDTEALARIRAAAPGITILPVNGNDIATRLQIEHYPVLITATSLEQ EEEEEECHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCEEEEEECCCCC >Mature Secondary Structure TRIFLICYFILFLAPVAQAKPTVVRDPAGDVTQPYFQATGLPINNRVQAERAVHADLST HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH FADEGWILPISSSRLSPGQITPRALNMPGLRPFFLVGDNPQSLVWLRKRAAELHEMGAAG HCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC LAVEVTDTEALARIRAAAPGITILPVNGNDIATRLQIEHYPVLITATSLEQ EEEEEECHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA