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The map label for this gene is ykfG [C]

Identifier: 77459227

GI number: 77459227

Start: 3446366

End: 3446860

Strand: Direct

Name: ykfG [C]

Synonym: Pfl01_3005

Alternate gene names: 77459227

Gene position: 3446366-3446860 (Clockwise)

Preceding gene: 77459226

Following gene: 77459228

Centisome position: 53.53

GC content: 55.96

Gene sequence:

>495_bases
ATGAGCACCCAACTCACACTGATTGAGACCTCGGATTTCGAGGCTGATCGCATTGTCCAAGAAAACCAGCTGATCGACGA
AGCGCTGCATATTCTGGATCGTCGGCTGTTCGCCCGCGGCCCTATCCTGACGTCGCCTGACACTGTGGCCTCATACCTAA
AACTGCACCTTGCGCAACAAGAGCATGAAGTCTTCGGTGTGATCTTTCTCGATGCCAGGCACCGGGTGCTGGCATTCGAA
GTCCTCTTTCACGGCAGCATTGATGGCGCCAGCGTTTACCCCCGCCAAGTCGTTAAGCGTTCCCTCGCGCATAACGCTGC
GGCCACCATTTTTGTTCACAACCACCCCTCAGGGTGTACGGAACCCAGCCAGGCGGATCGCGTCTTGACTGCACGACTGA
AGGAGGCCTTGGCCTTGATCGAAGTGCGTGTACTGGATCACTTTATCGTGGGTGAAGGTCGTCCTCTCTCCCTTGCCGAA
CATGGCTGGCTTTAA

Upstream 100 bases:

>100_bases
ACAGCGCGTCATCGGCTAACGCCCACGACTCCACACCCACCTTGGGGATACCACTCCCCTCGGGCGTGTCCCCCTGATTG
TTCCCTTCGGAGGTACCGCC

Downstream 100 bases:

>100_bases
CCCTCACAGGCGTCTTCGGGCGCCTTGTTCATTTTCATTCTGGAGAGCCCTCATGAACCTCACACACCAGGCCCCAGCCC
TACTGGTGGCCTCAAATCCA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSTQLTLIETSDFEADRIVQENQLIDEALHILDRRLFARGPILTSPDTVASYLKLHLAQQEHEVFGVIFLDARHRVLAFE
VLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADRVLTARLKEALALIEVRVLDHFIVGEGRPLSLAE
HGWL

Sequences:

>Translated_164_residues
MSTQLTLIETSDFEADRIVQENQLIDEALHILDRRLFARGPILTSPDTVASYLKLHLAQQEHEVFGVIFLDARHRVLAFE
VLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADRVLTARLKEALALIEVRVLDHFIVGEGRPLSLAE
HGWL
>Mature_163_residues
STQLTLIETSDFEADRIVQENQLIDEALHILDRRLFARGPILTSPDTVASYLKLHLAQQEHEVFGVIFLDARHRVLAFEV
LFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADRVLTARLKEALALIEVRVLDHFIVGEGRPLSLAEH
GWL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=145, Percent_Identity=50.3448275862069, Blast_Score=138, Evalue=2e-34,
Organism=Escherichia coli, GI1788312, Length=144, Percent_Identity=47.2222222222222, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1788997, Length=140, Percent_Identity=48.5714285714286, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87082300, Length=130, Percent_Identity=41.5384615384615, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18333; Mature: 18202

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQLTLIETSDFEADRIVQENQLIDEALHILDRRLFARGPILTSPDTVASYLKLHLAQQ
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
EHEVFGVIFLDARHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCT
CCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCC
EPSQADRVLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
>Mature Secondary Structure 
STQLTLIETSDFEADRIVQENQLIDEALHILDRRLFARGPILTSPDTVASYLKLHLAQQ
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
EHEVFGVIFLDARHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCT
CCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCC
EPSQADRVLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]