Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459226

Identifier: 77459226

GI number: 77459226

Start: 3446008

End: 3446265

Strand: Direct

Name: 77459226

Synonym: Pfl01_3004

Alternate gene names: NA

Gene position: 3446008-3446265 (Clockwise)

Preceding gene: 77459225

Following gene: 77459227

Centisome position: 53.52

GC content: 53.49

Gene sequence:

>258_bases
ATGGAATCCTTCTGGCTTTGCGACGACTGCCTGTTCGCTACTGCTTACGAGGACTACAGCACGTTATCGCTCTACTACAC
GACGGATGAAACCGAGAAACGCATCTCCGCCATCCATCGTGAACTGGTTCGGCTAATGCCCATCAGTGCCGATTTCGATC
CCGAAGCCGGCTGGGGGATAAGAGCCTTTTCTCCATTGCCTTGCGATGGTTGTGGTTCACATCTACACAGCCAACGCCAC
CGATTCACTCGGCTGTAA

Upstream 100 bases:

>100_bases
ACCCCACCCGTACCGTTCAGTCCGCCTGAACAGTCCACGATGTTCCACACCAAGGCGCTCCCTCGAGCGCCTTTTCTTCA
ATCCGCACAGGAGAACCATC

Downstream 100 bases:

>100_bases
ACAGCGCGTCATCGGCTAACGCCCACGACTCCACACCCACCTTGGGGATACCACTCCCCTCGGGCGTGTCCCCCTGATTG
TTCCCTTCGGAGGTACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MESFWLCDDCLFATAYEDYSTLSLYYTTDETEKRISAIHRELVRLMPISADFDPEAGWGIRAFSPLPCDGCGSHLHSQRH
RFTRL

Sequences:

>Translated_85_residues
MESFWLCDDCLFATAYEDYSTLSLYYTTDETEKRISAIHRELVRLMPISADFDPEAGWGIRAFSPLPCDGCGSHLHSQRH
RFTRL
>Mature_85_residues
MESFWLCDDCLFATAYEDYSTLSLYYTTDETEKRISAIHRELVRLMPISADFDPEAGWGIRAFSPLPCDGCGSHLHSQRH
RFTRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9849; Mature: 9849

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFWLCDDCLFATAYEDYSTLSLYYTTDETEKRISAIHRELVRLMPISADFDPEAGWGI
CCCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RAFSPLPCDGCGSHLHSQRHRFTRL
CCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MESFWLCDDCLFATAYEDYSTLSLYYTTDETEKRISAIHRELVRLMPISADFDPEAGWGI
CCCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RAFSPLPCDGCGSHLHSQRHRFTRL
CCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA