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The map label for this gene is alpA [C]

Identifier: 77459215

GI number: 77459215

Start: 3435573

End: 3435833

Strand: Direct

Name: alpA [C]

Synonym: Pfl01_2993

Alternate gene names: 77459215

Gene position: 3435573-3435833 (Clockwise)

Preceding gene: 77459214

Following gene: 77459216

Centisome position: 53.36

GC content: 54.41

Gene sequence:

>261_bases
ATGTGCCAATCGGCGCCAGGAGTGACCAGCATGTCCAGCCAATACTCACCCATCGTTGAAGCACCTCAACTGCAGGTCGA
GCGTCACATCATGCGGCGTGACGAGGTGGAGCGTAAAACCGGCTTCAAGCGTGCGCACATTTACAACTTGATGAAGGAAG
GGAAATTTCCTCAGGCTAAACGCATTGGATTGCGCGCAGTCGGATGGGACTCGCTAGAGATCGAACGGTGGATCGTTGAA
CGCTTAGGCCATCAGGTCTGA

Upstream 100 bases:

>100_bases
AACCTCATAAATCAATGAGACGGATTGCATTGCAATTACTCCTGTTGCGGCGCAATGACTCCTGTCTTTTTTTGCTCTTC
AATTCAGGTCACTTCCCACC

Downstream 100 bases:

>100_bases
TGCCATGCGAGTGGTATCGGTGATTTCCACAAAAGGTGGCGTAGGAAAAACCACAGTAGCTGCAAACCTTGGTGGTCTGT
TAGCTGATGCTGGCCTACGC

Product: phage transcriptional regulator AlpA

Products: NA

Alternate protein names: Transcriptional Regulator; Phage-Like Protein; Phage-Related Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MCQSAPGVTSMSSQYSPIVEAPQLQVERHIMRRDEVERKTGFKRAHIYNLMKEGKFPQAKRIGLRAVGWDSLEIERWIVE
RLGHQV

Sequences:

>Translated_86_residues
MCQSAPGVTSMSSQYSPIVEAPQLQVERHIMRRDEVERKTGFKRAHIYNLMKEGKFPQAKRIGLRAVGWDSLEIERWIVE
RLGHQV
>Mature_86_residues
MCQSAPGVTSMSSQYSPIVEAPQLQVERHIMRRDEVERKTGFKRAHIYNLMKEGKFPQAKRIGLRAVGWDSLEIERWIVE
RLGHQV

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9993; Mature: 9993

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQSAPGVTSMSSQYSPIVEAPQLQVERHIMRRDEVERKTGFKRAHIYNLMKEGKFPQAK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
RIGLRAVGWDSLEIERWIVERLGHQV
HCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCQSAPGVTSMSSQYSPIVEAPQLQVERHIMRRDEVERKTGFKRAHIYNLMKEGKFPQAK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
RIGLRAVGWDSLEIERWIVERLGHQV
HCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA