Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459214

Identifier: 77459214

GI number: 77459214

Start: 3434741

End: 3435490

Strand: Direct

Name: 77459214

Synonym: Pfl01_2992

Alternate gene names: NA

Gene position: 3434741-3435490 (Clockwise)

Preceding gene: 77459213

Following gene: 77459215

Centisome position: 53.35

GC content: 47.33

Gene sequence:

>750_bases
ATGTATACAACTCAAAGCTGCAACCTCTACGAAAAGCTTTTTTACAGGCCTGTCGATGCAGCCTTGCGTTGGTGCAACTT
AATCAACTACGAAAGAGAGATAATCGAGGTGGCTCAGCACGGCCTAAGCAGGCTCAAAACCAGCTTCCCGCAGTGGCCAT
GCCTGCATGCGAATACGGAGAAAATTTTAGATGCCATTCAACACGGCGAGCTCGCGTATGGATGCTTCGGCGTACCAGTA
GCCATGGGCACTCCTGTTTTATACGACCACGTAACCGTCCGCCACACTGACCTAAGACGTTGGATGTCGCGATATTATCC
TGACCAACGACCAGCGTTCCTCTTTGAAAATCGGCACAATCAAAAAGCAGGCATTAGCATTGCAACATACTTAGCATTGC
AAGGCGATCGGGATGCATTGAAAGTTCGATTAGAGAGTTTGGAAACAGCTCATCAACAATTGCTTAAGGACCTTGATGCG
ATTGGATTGGAAAAAAAGAGCATCTATGACTTGCTCAAGTCCAATCGTAAAGTCAGCGATCGCAGCGAATCCGTCTATCT
CAATATTATCGGGGCGATGGTCAATCTGTTTCTCGGCTATTCCCCATCAGGAAAACCATTGTCAACTTTTCAGTCCCAGG
CGGCCATTGTTGACGCACTAACCGCTCACTATAAAAACGTACCGGGCATAACCAAGCGCACGCTAGACGAAAAATTCGCT
GCCGGTAAACGCAACCTCATAAATCAATGA

Upstream 100 bases:

>100_bases
CAAGCCCGTTCGCGCCACCTACTTATTTGCATGCCCCCCCCTTCGAACCATACTTTCACAGTAAAATCAGGAGCAAAATA
CTTAAATGGAGTGACTCTTC

Downstream 100 bases:

>100_bases
GACGGATTGCATTGCAATTACTCCTGTTGCGGCGCAATGACTCCTGTCTTTTTTTGCTCTTCAATTCAGGTCACTTCCCA
CCATGTGCCAATCGGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MYTTQSCNLYEKLFYRPVDAALRWCNLINYEREIIEVAQHGLSRLKTSFPQWPCLHANTEKILDAIQHGELAYGCFGVPV
AMGTPVLYDHVTVRHTDLRRWMSRYYPDQRPAFLFENRHNQKAGISIATYLALQGDRDALKVRLESLETAHQQLLKDLDA
IGLEKKSIYDLLKSNRKVSDRSESVYLNIIGAMVNLFLGYSPSGKPLSTFQSQAAIVDALTAHYKNVPGITKRTLDEKFA
AGKRNLINQ

Sequences:

>Translated_249_residues
MYTTQSCNLYEKLFYRPVDAALRWCNLINYEREIIEVAQHGLSRLKTSFPQWPCLHANTEKILDAIQHGELAYGCFGVPV
AMGTPVLYDHVTVRHTDLRRWMSRYYPDQRPAFLFENRHNQKAGISIATYLALQGDRDALKVRLESLETAHQQLLKDLDA
IGLEKKSIYDLLKSNRKVSDRSESVYLNIIGAMVNLFLGYSPSGKPLSTFQSQAAIVDALTAHYKNVPGITKRTLDEKFA
AGKRNLINQ
>Mature_249_residues
MYTTQSCNLYEKLFYRPVDAALRWCNLINYEREIIEVAQHGLSRLKTSFPQWPCLHANTEKILDAIQHGELAYGCFGVPV
AMGTPVLYDHVTVRHTDLRRWMSRYYPDQRPAFLFENRHNQKAGISIATYLALQGDRDALKVRLESLETAHQQLLKDLDA
IGLEKKSIYDLLKSNRKVSDRSESVYLNIIGAMVNLFLGYSPSGKPLSTFQSQAAIVDALTAHYKNVPGITKRTLDEKFA
AGKRNLINQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28378; Mature: 28378

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTQSCNLYEKLFYRPVDAALRWCNLINYEREIIEVAQHGLSRLKTSFPQWPCLHANTE
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KILDAIQHGELAYGCFGVPVAMGTPVLYDHVTVRHTDLRRWMSRYYPDQRPAFLFENRHN
HHHHHHHCCCEEEHHHCCHHHHCCCCHHHCEEEHHHHHHHHHHHHCCCCCCEEHCCCCCC
QKAGISIATYLALQGDRDALKVRLESLETAHQQLLKDLDAIGLEKKSIYDLLKSNRKVSD
CCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
RSESVYLNIIGAMVNLFLGYSPSGKPLSTFQSQAAIVDALTAHYKNVPGITKRTLDEKFA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGKRNLINQ
HCHHHCCCC
>Mature Secondary Structure
MYTTQSCNLYEKLFYRPVDAALRWCNLINYEREIIEVAQHGLSRLKTSFPQWPCLHANTE
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KILDAIQHGELAYGCFGVPVAMGTPVLYDHVTVRHTDLRRWMSRYYPDQRPAFLFENRHN
HHHHHHHCCCEEEHHHCCHHHHCCCCHHHCEEEHHHHHHHHHHHHCCCCCCEEHCCCCCC
QKAGISIATYLALQGDRDALKVRLESLETAHQQLLKDLDAIGLEKKSIYDLLKSNRKVSD
CCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
RSESVYLNIIGAMVNLFLGYSPSGKPLSTFQSQAAIVDALTAHYKNVPGITKRTLDEKFA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGKRNLINQ
HCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA