Click here to switch to the map view.

The map label for this gene is xylZ [H]

Identifier: 77459191

GI number: 77459191

Start: 3403365

End: 3404378

Strand: Reverse

Name: xylZ [H]

Synonym: Pfl01_2966

Alternate gene names: 77459191

Gene position: 3404378-3403365 (Counterclockwise)

Preceding gene: 77459192

Following gene: 77459190

Centisome position: 52.88

GC content: 57.0

Gene sequence:

>1014_bases
ATGAGTTTCCAGATCGCATTGAATTTTGAAGACGGGATCACCCGCTTCATTGAGGCCCAGGGGCACGAAACCGTCGCTGA
TGCGGCGTATCGCCAAGGCATCAACATCCCGCTGGACTGCCGTGACGGCGCCTGCGGCACCTGCAAATGTTTCGCCGAGG
CCGGGCGTTACGACATGGGTGACAACTTCATCGAAGACGCCCTGAGCGAAGACGAGCTCACCCAAGGTTACGTGCTGACG
TGCCAGATGCGCGCTCAGAGCGATTGCGTCGTGCGGGTGCCCGCAGCTTCGCAAGTCTGCAAGACTGAACAGGAGAGTTT
TCAGGCATCGATCAGCGATGTGCGACAACTGTCTGAAAGCACAATCGCGCTATCGATCAAGGGCGATTGCCTGAACAAGC
TGGCGTTCCTGCCGGGCCAATACGTCAACTTACAAGTACCCGGTAGCGAACAGACACGCGCCTATTCTTTCAGCTCGTTG
CAGAAAGACGGTGAGGTCAGCTTCTTGATCCGTAACGTAACGGGCGGCCTGATGAGCAGTTTCCTGACCGGCCTGGCCAA
GGCCGGCGACAGCATGAACCTGGCCGGCCCTTTGGGCAGTTTCTACCTGCGTGAAATCAAGCGACCACTGCTGCTGCTCG
CTGGCGGCACCGGGCTGGCGCCATTCACAGCCATGTTGGAAAAAATCGCGGAGCAGGGCAGTGAGCATCCGGTGCACCTG
ATCTATGGCGTAACCAATGATTTCGATTTGGTCGAGTTGGATCGGTTGGAGGCTTTCGTTGCACGCATTCCCAACTTCAG
TTTTCGCGCCTGTGTGGCCAATCCGCAAAGTACTTATCCGTTCAAGGGCTATGTCACTCAGCACATCGAGCCCTGTCATC
TCAATGGGGGCGAGGTAGACGTTTATTTGTGCGGCCCGCCACCGATGGTCGAAGCGGTCAACCATTACATCCGCGAGCAA
GGGATTAACCCTGCCAATTTCTATTTCGAGAAGTTCGCGCCTGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
ACGTCCGCCAAGTCATCGACATTTATCACATCTGATCAGGCTGCGGCGAGCGCTGCCGACGCATCCAAATGTCGGTTCGA
CGCTGTGAGTGAGGTGCAAC

Downstream 100 bases:

>100_bases
ATCGTTACGCAAAGACTCCGTTCGAGGTTGTCATGAAAAACAGATTCGAAAACAAGGTTGCCTTGGTGACTGGCGCGGCT
CAAGGCATCGGTCGACGCGT

Product: benzoate 1,2-dioxygenase ferredoxin reductase subunit

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSFQIALNFEDGITRFIEAQGHETVADAAYRQGINIPLDCRDGACGTCKCFAEAGRYDMGDNFIEDALSEDELTQGYVLT
CQMRAQSDCVVRVPAASQVCKTEQESFQASISDVRQLSESTIALSIKGDCLNKLAFLPGQYVNLQVPGSEQTRAYSFSSL
QKDGEVSFLIRNVTGGLMSSFLTGLAKAGDSMNLAGPLGSFYLREIKRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPVHL
IYGVTNDFDLVELDRLEAFVARIPNFSFRACVANPQSTYPFKGYVTQHIEPCHLNGGEVDVYLCGPPPMVEAVNHYIREQ
GINPANFYFEKFAPAAA

Sequences:

>Translated_337_residues
MSFQIALNFEDGITRFIEAQGHETVADAAYRQGINIPLDCRDGACGTCKCFAEAGRYDMGDNFIEDALSEDELTQGYVLT
CQMRAQSDCVVRVPAASQVCKTEQESFQASISDVRQLSESTIALSIKGDCLNKLAFLPGQYVNLQVPGSEQTRAYSFSSL
QKDGEVSFLIRNVTGGLMSSFLTGLAKAGDSMNLAGPLGSFYLREIKRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPVHL
IYGVTNDFDLVELDRLEAFVARIPNFSFRACVANPQSTYPFKGYVTQHIEPCHLNGGEVDVYLCGPPPMVEAVNHYIREQ
GINPANFYFEKFAPAAA
>Mature_336_residues
SFQIALNFEDGITRFIEAQGHETVADAAYRQGINIPLDCRDGACGTCKCFAEAGRYDMGDNFIEDALSEDELTQGYVLTC
QMRAQSDCVVRVPAASQVCKTEQESFQASISDVRQLSESTIALSIKGDCLNKLAFLPGQYVNLQVPGSEQTRAYSFSSLQ
KDGEVSFLIRNVTGGLMSSFLTGLAKAGDSMNLAGPLGSFYLREIKRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPVHLI
YGVTNDFDLVELDRLEAFVARIPNFSFRACVANPQSTYPFKGYVTQHIEPCHLNGGEVDVYLCGPPPMVEAVNHYIREQG
INPANFYFEKFAPAAA

Specific function: Electron transfer component of toluate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=234, Percent_Identity=25.2136752136752, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788903, Length=210, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787658, Length=89, Percent_Identity=40.4494382022472, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322146, Length=187, Percent_Identity=31.0160427807487, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321673, Length=229, Percent_Identity=24.8908296943231, Blast_Score=66, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6323510, Length=199, Percent_Identity=26.1306532663317, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36790; Mature: 36659

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQIALNFEDGITRFIEAQGHETVADAAYRQGINIPLDCRDGACGTCKCFAEAGRYDMG
CCEEEEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCCCC
DNFIEDALSEDELTQGYVLTCQMRAQSDCVVRVPAASQVCKTEQESFQASISDVRQLSES
CHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
TIALSIKGDCLNKLAFLPGQYVNLQVPGSEQTRAYSFSSLQKDGEVSFLIRNVTGGLMSS
EEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHCCCCCEEEEEEHHHHHHHHH
FLTGLAKAGDSMNLAGPLGSFYLREIKRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPVHL
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
IYGVTNDFDLVELDRLEAFVARIPNFSFRACVANPQSTYPFKGYVTQHIEPCHLNGGEVD
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCCCEECCCCEEE
VYLCGPPPMVEAVNHYIREQGINPANFYFEKFAPAAA
EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
SFQIALNFEDGITRFIEAQGHETVADAAYRQGINIPLDCRDGACGTCKCFAEAGRYDMG
CEEEEEECHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCCCC
DNFIEDALSEDELTQGYVLTCQMRAQSDCVVRVPAASQVCKTEQESFQASISDVRQLSES
CHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
TIALSIKGDCLNKLAFLPGQYVNLQVPGSEQTRAYSFSSLQKDGEVSFLIRNVTGGLMSS
EEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCEEEHHHHCCCCCEEEEEEHHHHHHHHH
FLTGLAKAGDSMNLAGPLGSFYLREIKRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPVHL
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
IYGVTNDFDLVELDRLEAFVARIPNFSFRACVANPQSTYPFKGYVTQHIEPCHLNGGEVD
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCCCEECCCCEEE
VYLCGPPPMVEAVNHYIREQGINPANFYFEKFAPAAA
EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]