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The map label for this gene is yhdH [H]

Identifier: 77459164

GI number: 77459164

Start: 3380887

End: 3381870

Strand: Reverse

Name: yhdH [H]

Synonym: Pfl01_2939

Alternate gene names: 77459164

Gene position: 3381870-3380887 (Counterclockwise)

Preceding gene: 77459174

Following gene: 77459158

Centisome position: 52.53

GC content: 63.31

Gene sequence:

>984_bases
ATGTTCAAAGGCATTTTGATCGACAAAGACGACAGCGGTTATCGCGCCAACCTGCAAGAGATCAGTGATGAGCAACTGCC
GGACGGCGATGTGACGGTTCGGGTCGCGTACAGCACGCTGAACTTCAAGGACGGCCTGGCGATCACCGGCAGCAGCCCGG
TGGTGCGCAAGTTTCCGATGGTGCCGGGGATCGATCTGGCGGGCACCGTCGAAGTCAGCTCGCACCCGGATTACAAGGTT
GGCGATGCCGTGCTGCTCAATGGCTGGGGCGTCGGTGAAAGCCACTGCGGCGGACTGGCGCAGAAGGCGCGTCTGAACGG
TGACTGGCTGATTCCGCTGCCCAAGGCATTCACCGCCGCGCAAGCCATGGCCATCGGCACGGCCGGCTATACGGCGATGC
TGTGCGTCATGGCGCTGGAGCGCAACGGCGTGACCCCGCAACAGGGCGAAGTGCTGGTGACCGGTGCCAACGGTGGCGTC
GGCAGTTTTGCCATCGCATTGCTGAGCAAGCTGGGCTACCGCGTGGTCGCTTCGACTGGTCGGGTGTCGGAACACGAATA
CCTGAAACAACTGGGTGCCAGTGAAATTATTGATCGCGCCACCCTGTCCGAACCCGGCAAGCCGCTGGCCAAGGAGCGCT
GGGCGGGCGTTATCGATTCGGTCGGCAGCCACACGCTCGCCAATGCCTGTGCCAGCACCCGGGCCGAAGGCACCGTGGCT
GCGTGCGGTCTGGCTCAGGGCATGGATTTCCCGGCGTCTGTGGCGCCGTTCATTCTGCGTGGCGTGACGCTGGCCGGAAT
CAACAGCGTGACCCAGCCCAAGGCCCGCCGCATCGAGGCTTGGGATCGTCTGACAAAGGATCTGGATTTCGCGCTGTTGC
CGCTGATCAGCCATGAAATCGGCCTCGGCGAAGCCCTCGAAGCGGCCCCGAAGTTGCTGGCGGGGCAACTCCGGGGGCGA
GTTGTAGTTGATGTGAATCGCTGA

Upstream 100 bases:

>100_bases
GGCGTTGGGGCGCGATTGGCTAAAGGTCGAGTGGGGCAAAATGTTGCAATGTGCTATTCCAATGCCTCGATATCCTGAAT
TCCACCCGTGAGAGGCAGTC

Downstream 100 bases:

>100_bases
TTACTGCCGTGGTTTGCCTTCACGCTCGAGCAATTCGCGCTTGCGCTCCACGCCCCAGCGGTAGCCCGACAGATTGCCGT
CACTGCGCACAACGCGATGA

Product: zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFKGILIDKDDSGYRANLQEISDEQLPDGDVTVRVAYSTLNFKDGLAITGSSPVVRKFPMVPGIDLAGTVEVSSHPDYKV
GDAVLLNGWGVGESHCGGLAQKARLNGDWLIPLPKAFTAAQAMAIGTAGYTAMLCVMALERNGVTPQQGEVLVTGANGGV
GSFAIALLSKLGYRVVASTGRVSEHEYLKQLGASEIIDRATLSEPGKPLAKERWAGVIDSVGSHTLANACASTRAEGTVA
ACGLAQGMDFPASVAPFILRGVTLAGINSVTQPKARRIEAWDRLTKDLDFALLPLISHEIGLGEALEAAPKLLAGQLRGR
VVVDVNR

Sequences:

>Translated_327_residues
MFKGILIDKDDSGYRANLQEISDEQLPDGDVTVRVAYSTLNFKDGLAITGSSPVVRKFPMVPGIDLAGTVEVSSHPDYKV
GDAVLLNGWGVGESHCGGLAQKARLNGDWLIPLPKAFTAAQAMAIGTAGYTAMLCVMALERNGVTPQQGEVLVTGANGGV
GSFAIALLSKLGYRVVASTGRVSEHEYLKQLGASEIIDRATLSEPGKPLAKERWAGVIDSVGSHTLANACASTRAEGTVA
ACGLAQGMDFPASVAPFILRGVTLAGINSVTQPKARRIEAWDRLTKDLDFALLPLISHEIGLGEALEAAPKLLAGQLRGR
VVVDVNR
>Mature_327_residues
MFKGILIDKDDSGYRANLQEISDEQLPDGDVTVRVAYSTLNFKDGLAITGSSPVVRKFPMVPGIDLAGTVEVSSHPDYKV
GDAVLLNGWGVGESHCGGLAQKARLNGDWLIPLPKAFTAAQAMAIGTAGYTAMLCVMALERNGVTPQQGEVLVTGANGGV
GSFAIALLSKLGYRVVASTGRVSEHEYLKQLGASEIIDRATLSEPGKPLAKERWAGVIDSVGSHTLANACASTRAEGTVA
ACGLAQGMDFPASVAPFILRGVTLAGINSVTQPKARRIEAWDRLTKDLDFALLPLISHEIGLGEALEAAPKLLAGQLRGR
VVVDVNR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=52.6153846153846, Blast_Score=345, Evalue=2e-96,
Organism=Caenorhabditis elegans, GI71988145, Length=330, Percent_Identity=26.3636363636364, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319621, Length=339, Percent_Identity=26.8436578171091, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKGILIDKDDSGYRANLQEISDEQLPDGDVTVRVAYSTLNFKDGLAITGSSPVVRKFPM
CCCCEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCHHHHCCC
VPGIDLAGTVEVSSHPDYKVGDAVLLNGWGVGESHCGGLAQKARLNGDWLIPLPKAFTAA
CCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCHHHHHCCCCCEEEECCHHHHHH
QAMAIGTAGYTAMLCVMALERNGVTPQQGEVLVTGANGGVGSFAIALLSKLGYRVVASTG
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCC
RVSEHEYLKQLGASEIIDRATLSEPGKPLAKERWAGVIDSVGSHTLANACASTRAEGTVA
CCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
ACGLAQGMDFPASVAPFILRGVTLAGINSVTQPKARRIEAWDRLTKDLDFALLPLISHEI
EHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
GLGEALEAAPKLLAGQLRGRVVVDVNR
CCCHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MFKGILIDKDDSGYRANLQEISDEQLPDGDVTVRVAYSTLNFKDGLAITGSSPVVRKFPM
CCCCEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCHHHHCCC
VPGIDLAGTVEVSSHPDYKVGDAVLLNGWGVGESHCGGLAQKARLNGDWLIPLPKAFTAA
CCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHCCHHHHHCCCCCEEEECCHHHHHH
QAMAIGTAGYTAMLCVMALERNGVTPQQGEVLVTGANGGVGSFAIALLSKLGYRVVASTG
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCC
RVSEHEYLKQLGASEIIDRATLSEPGKPLAKERWAGVIDSVGSHTLANACASTRAEGTVA
CCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEE
ACGLAQGMDFPASVAPFILRGVTLAGINSVTQPKARRIEAWDRLTKDLDFALLPLISHEI
EHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
GLGEALEAAPKLLAGQLRGRVVVDVNR
CCCHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]