| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459158
Identifier: 77459158
GI number: 77459158
Start: 3377176
End: 3377532
Strand: Reverse
Name: 77459158
Synonym: Pfl01_2933
Alternate gene names: NA
Gene position: 3377532-3377176 (Counterclockwise)
Preceding gene: 77459164
Following gene: 77459157
Centisome position: 52.46
GC content: 59.1
Gene sequence:
>357_bases ATGAAGTGGGGTGTGGTGATTCTGCCGTTGGCATTGGCAATGGGCGGTTGCGCAAGCGTTTCGGAAATCAATGAAACGCT ACCCACCATGGTCGTTATTTCCGGCAAGAAACCCCATGAGTATGCTCAGTGCCTGACCGAAAAGCTGTCCGACAGCCGAG GCGCCTTGCAGGTAGAGCGGCACAAGGACGACGTTCGGGTCATCGTTCCGGGCAAGCTGGGATCGGGGCCGGCAGCGGTA TTCGACATCGAGGATCGTTCGGGTGGCAGCAGCATCAAGCTGCACGAGCGGATGTCCAATGTACCGCTGCGTCCATGGGA TGTGCGCAAGGCGGCCACGGCCTGTATTTCCGGCTGA
Upstream 100 bases:
>100_bases ATTTAAAACAGATATTCACGTTTCCATGTGGGTTAAATGCAGCAGGCCTCGGAGAAAAACGGCATTCGTGCTGTCGGAGG GTCTTTATCGGAGGTTTTGT
Downstream 100 bases:
>100_bases TAGACTGTCAACAGTCAGCATTGATGCCGTCACAGCGTTGCTGTGGCGGCATTGTCATTTCTGGAGTGGTGAATGAAGAG AGAGCAGGTGCGGGAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKWGVVILPLALAMGGCASVSEINETLPTMVVISGKKPHEYAQCLTEKLSDSRGALQVERHKDDVRVIVPGKLGSGPAAV FDIEDRSGGSSIKLHERMSNVPLRPWDVRKAATACISG
Sequences:
>Translated_118_residues MKWGVVILPLALAMGGCASVSEINETLPTMVVISGKKPHEYAQCLTEKLSDSRGALQVERHKDDVRVIVPGKLGSGPAAV FDIEDRSGGSSIKLHERMSNVPLRPWDVRKAATACISG >Mature_118_residues MKWGVVILPLALAMGGCASVSEINETLPTMVVISGKKPHEYAQCLTEKLSDSRGALQVERHKDDVRVIVPGKLGSGPAAV FDIEDRSGGSSIKLHERMSNVPLRPWDVRKAATACISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12638; Mature: 12638
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWGVVILPLALAMGGCASVSEINETLPTMVVISGKKPHEYAQCLTEKLSDSRGALQVER CCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE HKDDVRVIVPGKLGSGPAAVFDIEDRSGGSSIKLHERMSNVPLRPWDVRKAATACISG CCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKWGVVILPLALAMGGCASVSEINETLPTMVVISGKKPHEYAQCLTEKLSDSRGALQVER CCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE HKDDVRVIVPGKLGSGPAAVFDIEDRSGGSSIKLHERMSNVPLRPWDVRKAATACISG CCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA