| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yajO [H]
Identifier: 77459140
GI number: 77459140
Start: 3359984
End: 3360997
Strand: Direct
Name: yajO [H]
Synonym: Pfl01_2915
Alternate gene names: 77459140
Gene position: 3359984-3360997 (Clockwise)
Preceding gene: 77459139
Following gene: 77459141
Centisome position: 52.19
GC content: 62.62
Gene sequence:
>1014_bases ATGAGCTATCGCACACTGGGTCACTCGGGGTTGCAAGTGTCCGCCCTCACCCTCGGCACGATGATGTTCGGCGAACAGAC CAGCGCGGAAGACTCGCTGCGCATCATCGACAAGGCCTGGGATCAGGGCATCAACTTCATCGACACCGCCGACGTCTATA CCAACGGCCGCTCGGAAGAGATCGTCGGCGAAGCCATCGCCCGTCATCGGCATGAATGGGTGCTGGCGACCAAAGTCGGT TTCGGCCCCGTGGATGGCGTGCCGAACCGCAGCGGCTTGAGCCGCAAGCACATCTTCAATGGTCTGGAGGCCAGCCTGAC CCGGCTCGGCACCGACTACCTCGACATCTATTACCTGCACCGCGAAGACCACAACACCCCGCTGGAAGTGACGATCTCGG CGATTGGCGATCTGATTCGCCAGGGCAAGATCCGTTATTGGGGCCTGTCGAACTATCGCGGCTGGCGGATTGCCGAGGTG ATCCGCGTGGCGGACAAACTCGGCGTCGATCGCCCGGTGATCAGCCAGCCGCTGTACAACATCGTCAACCGTCAGGCCGA GACCGAGCAGATCACCGCCGCCCAGACTTACGGCCTCGGCGTCGTGCCTTACAGCCCGCTGGCCCGTGGCGTGCTCAGCG GCAAGTACGCACCGGACGTGACCCCGGACGCCAACAGCCGGGCCGGGCGCCAGGACAAACGGATTCTGGAGACTGAATGG CGCGTGGAATCGTTGCGCATTGCCCAGCAGATTCAGCAATACACCCGGGAGCGTGGGGTCGGGATTGTCGAGTTTGCGAT TGCCTGGGTGCTGAACAACGGCGCGGTGACCTCGGCGATTGTCGGGCCGCGTACGGAAGAACAGTGGGATGCGTACACCA AGGCGCAGGCGGTGAAGATCACGGCGGAGGATGAGGCGTTTATCGATTCGCTGGTGACGCCGGGGCATGCGTCTACGCCG GGGTTTAATGATGTGAGCCATTTTGTGTCGGGCCGCAAACCGCGTTCGGCTTGA
Upstream 100 bases:
>100_bases GCGCGAGCGCTGCGAGGCGTTGCGGCGATAAATTCACTTTGCCGCGCCGGGCGCTTCTGGTATTTGATGGAAGCTTTCCC ACCGACAAAAGGATTTCGGC
Downstream 100 bases:
>100_bases GACCGCTGCCCTCACCCTAGCCCTCTCCCGGAGGGAGAGGGAACCGATTGGGGGATATTGAAGCTAAGCTTTTGCCTGAA GCTCTCGTGGTGAATCCACA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSYRTLGHSGLQVSALTLGTMMFGEQTSAEDSLRIIDKAWDQGINFIDTADVYTNGRSEEIVGEAIARHRHEWVLATKVG FGPVDGVPNRSGLSRKHIFNGLEASLTRLGTDYLDIYYLHREDHNTPLEVTISAIGDLIRQGKIRYWGLSNYRGWRIAEV IRVADKLGVDRPVISQPLYNIVNRQAETEQITAAQTYGLGVVPYSPLARGVLSGKYAPDVTPDANSRAGRQDKRILETEW RVESLRIAQQIQQYTRERGVGIVEFAIAWVLNNGAVTSAIVGPRTEEQWDAYTKAQAVKITAEDEAFIDSLVTPGHASTP GFNDVSHFVSGRKPRSA
Sequences:
>Translated_337_residues MSYRTLGHSGLQVSALTLGTMMFGEQTSAEDSLRIIDKAWDQGINFIDTADVYTNGRSEEIVGEAIARHRHEWVLATKVG FGPVDGVPNRSGLSRKHIFNGLEASLTRLGTDYLDIYYLHREDHNTPLEVTISAIGDLIRQGKIRYWGLSNYRGWRIAEV IRVADKLGVDRPVISQPLYNIVNRQAETEQITAAQTYGLGVVPYSPLARGVLSGKYAPDVTPDANSRAGRQDKRILETEW RVESLRIAQQIQQYTRERGVGIVEFAIAWVLNNGAVTSAIVGPRTEEQWDAYTKAQAVKITAEDEAFIDSLVTPGHASTP GFNDVSHFVSGRKPRSA >Mature_336_residues SYRTLGHSGLQVSALTLGTMMFGEQTSAEDSLRIIDKAWDQGINFIDTADVYTNGRSEEIVGEAIARHRHEWVLATKVGF GPVDGVPNRSGLSRKHIFNGLEASLTRLGTDYLDIYYLHREDHNTPLEVTISAIGDLIRQGKIRYWGLSNYRGWRIAEVI RVADKLGVDRPVISQPLYNIVNRQAETEQITAAQTYGLGVVPYSPLARGVLSGKYAPDVTPDANSRAGRQDKRILETEWR VESLRIAQQIQQYTRERGVGIVEFAIAWVLNNGAVTSAIVGPRTEEQWDAYTKAQAVKITAEDEAFIDSLVTPGHASTPG FNDVSHFVSGRKPRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=296, Percent_Identity=36.4864864864865, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI4504825, Length=294, Percent_Identity=36.3945578231293, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI27436962, Length=298, Percent_Identity=36.5771812080537, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI27436964, Length=298, Percent_Identity=36.5771812080537, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI27436966, Length=298, Percent_Identity=36.241610738255, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=32.8173374613003, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI223718702, Length=230, Percent_Identity=33.4782608695652, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI41327764, Length=205, Percent_Identity=36.0975609756098, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI41152114, Length=203, Percent_Identity=34.9753694581281, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI223718708, Length=167, Percent_Identity=33.5329341317365, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=36.3076923076923, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=33.6363636363636, Blast_Score=167, Evalue=8e-43, Organism=Escherichia coli, GI1789199, Length=344, Percent_Identity=31.3953488372093, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1788070, Length=327, Percent_Identity=28.7461773700306, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI1788081, Length=212, Percent_Identity=33.0188679245283, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787674, Length=212, Percent_Identity=25.9433962264151, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI48994888, Length=155, Percent_Identity=29.6774193548387, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI212645785, Length=300, Percent_Identity=25.6666666666667, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=339, Percent_Identity=32.4483775811209, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6323998, Length=324, Percent_Identity=25.9259259259259, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=25.6756756756757, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319951, Length=323, Percent_Identity=24.7678018575851, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=226, Percent_Identity=24.3362831858407, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321052, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640980, Length=316, Percent_Identity=26.2658227848101, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI45549126, Length=316, Percent_Identity=26.2658227848101, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646155, Length=296, Percent_Identity=26.3513513513513, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24646159, Length=225, Percent_Identity=28.8888888888889, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37368; Mature: 37237
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRTLGHSGLQVSALTLGTMMFGEQTSAEDSLRIIDKAWDQGINFIDTADVYTNGRSEE CCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCHHHCCCCCHH IVGEAIARHRHEWVLATKVGFGPVDGVPNRSGLSRKHIFNGLEASLTRLGTDYLDIYYLH HHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE REDHNTPLEVTISAIGDLIRQGKIRYWGLSNYRGWRIAEVIRVADKLGVDRPVISQPLYN ECCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH IVNRQAETEQITAAQTYGLGVVPYSPLARGVLSGKYAPDVTPDANSRAGRQDKRILETEW HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVESLRIAQQIQQYTRERGVGIVEFAIAWVLNNGAVTSAIVGPRTEEQWDAYTKAQAVKI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHCCCCCCHHHHHHHHHCEEEEE TAEDEAFIDSLVTPGHASTPGFNDVSHFVSGRKPRSA EECHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SYRTLGHSGLQVSALTLGTMMFGEQTSAEDSLRIIDKAWDQGINFIDTADVYTNGRSEE CCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCHHHCCCCCHH IVGEAIARHRHEWVLATKVGFGPVDGVPNRSGLSRKHIFNGLEASLTRLGTDYLDIYYLH HHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE REDHNTPLEVTISAIGDLIRQGKIRYWGLSNYRGWRIAEVIRVADKLGVDRPVISQPLYN ECCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH IVNRQAETEQITAAQTYGLGVVPYSPLARGVLSGKYAPDVTPDANSRAGRQDKRILETEW HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVESLRIAQQIQQYTRERGVGIVEFAIAWVLNNGAVTSAIVGPRTEEQWDAYTKAQAVKI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHCCCCCCHHHHHHHHHCEEEEE TAEDEAFIDSLVTPGHASTPGFNDVSHFVSGRKPRSA EECHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]