| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459123
Identifier: 77459123
GI number: 77459123
Start: 3340998
End: 3342995
Strand: Reverse
Name: 77459123
Synonym: Pfl01_2898
Alternate gene names: NA
Gene position: 3342995-3340998 (Counterclockwise)
Preceding gene: 77459124
Following gene: 77459122
Centisome position: 51.92
GC content: 52.05
Gene sequence:
>1998_bases ATGAACAGTCGGGTTGAAAAGGCTATATTGTCCAGGAGGGTTTTACTTCAGAAAAGTTATGGCGCAGCTGGAGTGTTCGC AGATCCTCCAGCCGTCGACATTCCTGCGCAAACGCTGCCTGGCGGCGACTTGCGTATTCCGGTGTCAGCGCTTTCCGCAC CACTTGAGTACACGATCCCAAAGCCAACTGAACCAGAAGATAAAGATGATTTGATCGAGTTCAAAATTCGCGAAAAAGGC ACAACCCTTTGGAGCGACATCGAACCCATGCAAGCGCTGGGGCCGATTGCCGAACGCAAGTGGCCTTTGCCAAAAACCAT TCCGTTAACGCCATGGATGACCGAAAAAACGACACCGGAGGCTCCAACAGAATACGAAGTTCAATATATCTACTGGTACG GCGCGGTCAACCAAGGCAATTCGCTGATTAAGACATACGCCATTGACCGGACGCCGCCTTACAGAGTCAAAAACCCGGCT TCCAATCTTTCTCCCAAGGCGGCCAATTATCCGGCCTCCATCCCGCCGGGCAGTGTCATCGATGAAAAGGTTATCGCGGA TAATCCGGGCGGTATCGTGTTGACTGCTGCGGCTTACGACAATTATCACGCCACGGACGAATTGTGGGCCTGGTTTGGCA AGGCTCCGGATACGGTGCGTGACGAGCCGGTAGTTAAAGTCACCTTGCCTGCTTCCCGTGAATTTACGATACCCATCAAG ACTTACGTTGACGCTGAAGAGGGTAGTAACACGGTTATCTATAAAGTACGGGACCTTGCCGGTAACGAGGGAAAAAACTC GAATCCCGTCTCCCGTGAAATCAGACGGATTGCCGATCCGACGAAGTTTGATATTCCGGTCGTGCCACTGGCTGCAGACG ACCTGATTGATCTGGCCGACTGCAGTGTGGGCGTTACTCTTGAGGCCGAAGTGCCTGTTCCGAATGCGCCAACAGACACC TTGGCGGCTTTTTGGGGTAGTGAGGAGTTGGGTGAGAAACCCGTCAGTGGCGCCGTCGGTGGAAAGCTGACCTGGGATGT ACCCTATGACAAGATCAAGAAGGTATACGGCAATACCGACGGTGATGAAGAAACCGAGTTCAGTTATGCCATGTTCAGAG GCAATCGATATATTGGTGGCAACAAGGACACGACCCTTGTCAACATCTTCTACCGCGGCCCCGTCAATCCCGATGAGCCC AATCCGGTCAACCCTGTTCTTGAGAAACCTGTACTGCAGTTTGCGGGCGGTAGTACAGACAAGGTAGAGGAGTCGGACTA CGGGAATGATGCGACACTTTCCGTAGAACTGTTCACGGCCCCTCCTGCCGAAGAAGGTTGGAAAGCTACGATCTACTATG ACAATGAGTTGGTCAAAACCTTCGAGCTGCGGGGCGGTGATGAGGGCACAACGCTAGAGGCGACTTTACCCTGGAACACT ATATTCACTCACGGTCCAGGCACCAAACCTGTCCACTGGATACTTCATAGTGATAACAATCCCAACCCGATTTCCTGTAC TCCAAAAGATATTCCTGTTGCTGCGTTTCCAATCCAGACACCGGCACCTGAAGTGCAAAATCTTGCTGGCCCACTGAAAA GAATCGGTTGTACAACATTGAACTGGGGCACCGGTGACGGGACTTCTCGCCGGAACTTGCGCGTCATCATTCCGAAAAGT GCCTACACCGTTTCTGGCGAGAAAATTACGTTGAGTTTCGCTGCGTATACTGATGCCACTCCTCCGGTACTGGTTCCAGG GACGGACACTACAGCACAGCTAGACGTACCTGATCCTTATCCAGATGCAGGCGCAACCATTGACATTGGTGTGTATGAAA CACACTTCAAACCAGCCAACCGGGCCAACGGAGTGCTGTCTTATACCATTACTCGTACGGGCACAACACCGACTCCCGAT TCAGCAAAAGCGCAGCATTTCATCCTGCTGACTAACAGCGAAGGACAATACTGTGACGAAGTTTACCCCGCACCTTAA
Upstream 100 bases:
>100_bases GCCCTTGAAGTTTGACGATAAGTGAGTTTTGAGCAGCACTGTTGGGAAGCAGTAATCGAAAATATCACGTCTTGATTAAT TTAATAGCGGGAGTTTTAAA
Downstream 100 bases:
>100_bases AGCGGGCGGCAGACAGTGCGGCCGGGGAGCCGGGCGTGCTGTCTGCTGTTACTTTGTTCACCGCATAAAAGTTTTATGGT GGGTTTTTCCGACAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MNSRVEKAILSRRVLLQKSYGAAGVFADPPAVDIPAQTLPGGDLRIPVSALSAPLEYTIPKPTEPEDKDDLIEFKIREKG TTLWSDIEPMQALGPIAERKWPLPKTIPLTPWMTEKTTPEAPTEYEVQYIYWYGAVNQGNSLIKTYAIDRTPPYRVKNPA SNLSPKAANYPASIPPGSVIDEKVIADNPGGIVLTAAAYDNYHATDELWAWFGKAPDTVRDEPVVKVTLPASREFTIPIK TYVDAEEGSNTVIYKVRDLAGNEGKNSNPVSREIRRIADPTKFDIPVVPLAADDLIDLADCSVGVTLEAEVPVPNAPTDT LAAFWGSEELGEKPVSGAVGGKLTWDVPYDKIKKVYGNTDGDEETEFSYAMFRGNRYIGGNKDTTLVNIFYRGPVNPDEP NPVNPVLEKPVLQFAGGSTDKVEESDYGNDATLSVELFTAPPAEEGWKATIYYDNELVKTFELRGGDEGTTLEATLPWNT IFTHGPGTKPVHWILHSDNNPNPISCTPKDIPVAAFPIQTPAPEVQNLAGPLKRIGCTTLNWGTGDGTSRRNLRVIIPKS AYTVSGEKITLSFAAYTDATPPVLVPGTDTTAQLDVPDPYPDAGATIDIGVYETHFKPANRANGVLSYTITRTGTTPTPD SAKAQHFILLTNSEGQYCDEVYPAP
Sequences:
>Translated_665_residues MNSRVEKAILSRRVLLQKSYGAAGVFADPPAVDIPAQTLPGGDLRIPVSALSAPLEYTIPKPTEPEDKDDLIEFKIREKG TTLWSDIEPMQALGPIAERKWPLPKTIPLTPWMTEKTTPEAPTEYEVQYIYWYGAVNQGNSLIKTYAIDRTPPYRVKNPA SNLSPKAANYPASIPPGSVIDEKVIADNPGGIVLTAAAYDNYHATDELWAWFGKAPDTVRDEPVVKVTLPASREFTIPIK TYVDAEEGSNTVIYKVRDLAGNEGKNSNPVSREIRRIADPTKFDIPVVPLAADDLIDLADCSVGVTLEAEVPVPNAPTDT LAAFWGSEELGEKPVSGAVGGKLTWDVPYDKIKKVYGNTDGDEETEFSYAMFRGNRYIGGNKDTTLVNIFYRGPVNPDEP NPVNPVLEKPVLQFAGGSTDKVEESDYGNDATLSVELFTAPPAEEGWKATIYYDNELVKTFELRGGDEGTTLEATLPWNT IFTHGPGTKPVHWILHSDNNPNPISCTPKDIPVAAFPIQTPAPEVQNLAGPLKRIGCTTLNWGTGDGTSRRNLRVIIPKS AYTVSGEKITLSFAAYTDATPPVLVPGTDTTAQLDVPDPYPDAGATIDIGVYETHFKPANRANGVLSYTITRTGTTPTPD SAKAQHFILLTNSEGQYCDEVYPAP >Mature_665_residues MNSRVEKAILSRRVLLQKSYGAAGVFADPPAVDIPAQTLPGGDLRIPVSALSAPLEYTIPKPTEPEDKDDLIEFKIREKG TTLWSDIEPMQALGPIAERKWPLPKTIPLTPWMTEKTTPEAPTEYEVQYIYWYGAVNQGNSLIKTYAIDRTPPYRVKNPA SNLSPKAANYPASIPPGSVIDEKVIADNPGGIVLTAAAYDNYHATDELWAWFGKAPDTVRDEPVVKVTLPASREFTIPIK TYVDAEEGSNTVIYKVRDLAGNEGKNSNPVSREIRRIADPTKFDIPVVPLAADDLIDLADCSVGVTLEAEVPVPNAPTDT LAAFWGSEELGEKPVSGAVGGKLTWDVPYDKIKKVYGNTDGDEETEFSYAMFRGNRYIGGNKDTTLVNIFYRGPVNPDEP NPVNPVLEKPVLQFAGGSTDKVEESDYGNDATLSVELFTAPPAEEGWKATIYYDNELVKTFELRGGDEGTTLEATLPWNT IFTHGPGTKPVHWILHSDNNPNPISCTPKDIPVAAFPIQTPAPEVQNLAGPLKRIGCTTLNWGTGDGTSRRNLRVIIPKS AYTVSGEKITLSFAAYTDATPPVLVPGTDTTAQLDVPDPYPDAGATIDIGVYETHFKPANRANGVLSYTITRTGTTPTPD SAKAQHFILLTNSEGQYCDEVYPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72346; Mature: 72346
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRVEKAILSRRVLLQKSYGAAGVFADPPAVDIPAQTLPGGDLRIPVSALSAPLEYTIP CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCEEEECC KPTEPEDKDDLIEFKIREKGTTLWSDIEPMQALGPIAERKWPLPKTIPLTPWMTEKTTPE CCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC APTEYEVQYIYWYGAVNQGNSLIKTYAIDRTPPYRVKNPASNLSPKAANYPASIPPGSVI CCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEKVIADNPGGIVLTAAAYDNYHATDELWAWFGKAPDTVRDEPVVKVTLPASREFTIPIK CCCEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEE TYVDAEEGSNTVIYKVRDLAGNEGKNSNPVSREIRRIADPTKFDIPVVPLAADDLIDLAD EEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHC CSVGVTLEAEVPVPNAPTDTLAAFWGSEELGEKPVSGAVGGKLTWDVPYDKIKKVYGNTD CCEEEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCC GDEETEFSYAMFRGNRYIGGNKDTTLVNIFYRGPVNPDEPNPVNPVLEKPVLQFAGGSTD CCCCCEEEEEEEECCEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCHHHHCCCCCC KVEESDYGNDATLSVELFTAPPAEEGWKATIYYDNELVKTFELRGGDEGTTLEATLPWNT CCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCE IFTHGPGTKPVHWILHSDNNPNPISCTPKDIPVAAFPIQTPAPEVQNLAGPLKRIGCTTL EEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEE NWGTGDGTSRRNLRVIIPKSAYTVSGEKITLSFAAYTDATPPVLVPGTDTTAQLDVPDPY ECCCCCCCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCCCEEECCCCCEEEEECCCCC PDAGATIDIGVYETHFKPANRANGVLSYTITRTGTTPTPDSAKAQHFILLTNSEGQYCDE CCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC VYPAP CCCCC >Mature Secondary Structure MNSRVEKAILSRRVLLQKSYGAAGVFADPPAVDIPAQTLPGGDLRIPVSALSAPLEYTIP CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCEEEECC KPTEPEDKDDLIEFKIREKGTTLWSDIEPMQALGPIAERKWPLPKTIPLTPWMTEKTTPE CCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC APTEYEVQYIYWYGAVNQGNSLIKTYAIDRTPPYRVKNPASNLSPKAANYPASIPPGSVI CCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DEKVIADNPGGIVLTAAAYDNYHATDELWAWFGKAPDTVRDEPVVKVTLPASREFTIPIK CCCEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEE TYVDAEEGSNTVIYKVRDLAGNEGKNSNPVSREIRRIADPTKFDIPVVPLAADDLIDLAD EEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHC CSVGVTLEAEVPVPNAPTDTLAAFWGSEELGEKPVSGAVGGKLTWDVPYDKIKKVYGNTD CCEEEEEEECCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCC GDEETEFSYAMFRGNRYIGGNKDTTLVNIFYRGPVNPDEPNPVNPVLEKPVLQFAGGSTD CCCCCEEEEEEEECCEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCHHHHCCCCCC KVEESDYGNDATLSVELFTAPPAEEGWKATIYYDNELVKTFELRGGDEGTTLEATLPWNT CCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCE IFTHGPGTKPVHWILHSDNNPNPISCTPKDIPVAAFPIQTPAPEVQNLAGPLKRIGCTTL EEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEE NWGTGDGTSRRNLRVIIPKSAYTVSGEKITLSFAAYTDATPPVLVPGTDTTAQLDVPDPY ECCCCCCCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCCCEEECCCCCEEEEECCCCC PDAGATIDIGVYETHFKPANRANGVLSYTITRTGTTPTPDSAKAQHFILLTNSEGQYCDE CCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC VYPAP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA