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The map label for this gene is nudC

Identifier: 77459106

GI number: 77459106

Start: 3322521

End: 3323351

Strand: Reverse

Name: nudC

Synonym: Pfl01_2881

Alternate gene names: 77459106

Gene position: 3323351-3322521 (Counterclockwise)

Preceding gene: 77459107

Following gene: 77459104

Centisome position: 51.62

GC content: 61.85

Gene sequence:

>831_bases
ATGACATCTCGCTGGACCACTGCAGTACTGGACACCGATCAACCCGGCGGCTGGGCCGTGGCGCGCAGCCCCGAGGGTTT
CCTGTTCGATGACAACGGCGTGCTGTTCCCCCGGGAATGGCTCAAGCGCCAGGACTTGTCGATCCTCGCCGAACACGGTA
TCGGTCATCTCGATGGCGAACCGGTGTATCTGCTGGAACTGCACAGCACCAGCGAGGTGCCGGGTTGCAACTGGAAAGGC
CTGCGGGCGTTCATGCTCGACGGCGATCACACGATCTACAAAGTGCTGGGCTACGCCGCGCAAATCGGGACGTGGGCTCG
CGAACACCGGTTTTGCGGCAATTGCGGTCAGGCCATGACCCAGGTGCCTCGGGAGCGGGCGATGTATTGCCAGCCCTGCG
ATCTGCGCAGTTATCCGCGGATTTCGCCGAGCATGATCGTGCTGGTGACCCGTGGCGATGAAGTGCTTCTGGCGCGCTCA
CCGCGTTTCGTCACCGGGGTCTACAGCACGCTGGCCGGGTTTGCCGAACCGGGGGAATCGGCCGAGGATTGTCTGATTCG
CGAAGTGCGCGAGGAAGTGCAGATCGAGGTGAAGAACATTCAGTACATGGGCAGCCAGTGCTGGCCGTTCCCGCACTCGA
TGATGCTCGGCTTCCATGCCGAATACGCCGGTGGCGAAATTGTCTGCCAGGAAGACGAGATCGAAGACGCCCAGTGGTTC
AACGTGCACGATCTGCCGCCATTGCCGGCGTCCAAATCGATTGCCCGATACCTGATCGACGTCTATGTGGCGCGGCGCTT
AGGCCACGCTGAACCAGTGCTGCCAGGCTAG

Upstream 100 bases:

>100_bases
TGCCACCTGGAACGCCGCCATGCTGCAATCCAACGATTTGCGCGTGGCCATGGCCGCCCATATGAGCAAACAGAAACCCG
AATTTCTGGATTGAGAAACC

Downstream 100 bases:

>100_bases
GCGCACGGTCAACCCCAGCACCACGGTGATGAACACCGGACGAATGAACTTGGCGCCGCCGCTGATCGCGGTGCGCGCCC
CGAAGAACGCGCCGACCATC

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTSRWTTAVLDTDQPGGWAVARSPEGFLFDDNGVLFPREWLKRQDLSILAEHGIGHLDGEPVYLLELHSTSEVPGCNWKG
LRAFMLDGDHTIYKVLGYAAQIGTWAREHRFCGNCGQAMTQVPRERAMYCQPCDLRSYPRISPSMIVLVTRGDEVLLARS
PRFVTGVYSTLAGFAEPGESAEDCLIREVREEVQIEVKNIQYMGSQCWPFPHSMMLGFHAEYAGGEIVCQEDEIEDAQWF
NVHDLPPLPASKSIARYLIDVYVARRLGHAEPVLPG

Sequences:

>Translated_276_residues
MTSRWTTAVLDTDQPGGWAVARSPEGFLFDDNGVLFPREWLKRQDLSILAEHGIGHLDGEPVYLLELHSTSEVPGCNWKG
LRAFMLDGDHTIYKVLGYAAQIGTWAREHRFCGNCGQAMTQVPRERAMYCQPCDLRSYPRISPSMIVLVTRGDEVLLARS
PRFVTGVYSTLAGFAEPGESAEDCLIREVREEVQIEVKNIQYMGSQCWPFPHSMMLGFHAEYAGGEIVCQEDEIEDAQWF
NVHDLPPLPASKSIARYLIDVYVARRLGHAEPVLPG
>Mature_275_residues
TSRWTTAVLDTDQPGGWAVARSPEGFLFDDNGVLFPREWLKRQDLSILAEHGIGHLDGEPVYLLELHSTSEVPGCNWKGL
RAFMLDGDHTIYKVLGYAAQIGTWAREHRFCGNCGQAMTQVPRERAMYCQPCDLRSYPRISPSMIVLVTRGDEVLLARSP
RFVTGVYSTLAGFAEPGESAEDCLIREVREEVQIEVKNIQYMGSQCWPFPHSMMLGFHAEYAGGEIVCQEDEIEDAQWFN
VHDLPPLPASKSIARYLIDVYVARRLGHAEPVLPG

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain

Homologues:

Organism=Homo sapiens, GI50593112, Length=167, Percent_Identity=37.7245508982036, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI13899267, Length=190, Percent_Identity=35.2631578947368, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI48994995, Length=211, Percent_Identity=40.7582938388626, Blast_Score=164, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI71986510, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI212645999, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6321371, Length=165, Percent_Identity=35.7575757575758, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUDC_PSEPF (Q3KC83)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_348612.1
- HSSP:   P32664
- ProteinModelPortal:   Q3KC83
- SMR:   Q3KC83
- STRING:   Q3KC83
- GeneID:   3712429
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_2881
- eggNOG:   COG2816
- HOGENOM:   HBG736436
- OMA:   TWAREHR
- ProtClustDB:   PRK00241
- BioCyc:   PFLU205922:PFL_2881-MONOMER
- HAMAP:   MF_00297
- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376
- Gene3D:   G3DSA:3.90.79.10

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase; SSF55811 NUDIX_hydrolase

EC number: =3.6.1.22

Molecular weight: Translated: 31001; Mature: 30869

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS51462 NUDIX; PS00893 NUDIX_BOX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRWTTAVLDTDQPGGWAVARSPEGFLFDDNGVLFPREWLKRQDLSILAEHGIGHLDGE
CCCCEEEEEEECCCCCCEEEEECCCCCEECCCCEECCHHHHCHHHHHHHHHCCCCCCCCC
PVYLLELHSTSEVPGCNWKGLRAFMLDGDHTIYKVLGYAAQIGTWAREHRFCGNCGQAMT
CEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QVPRERAMYCQPCDLRSYPRISPSMIVLVTRGDEVLLARSPRFVTGVYSTLAGFAEPGES
HCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCC
AEDCLIREVREEVQIEVKNIQYMGSQCWPFPHSMMLGFHAEYAGGEIVCQEDEIEDAQWF
HHHHHHHHHHHHHEEEEEHEEECCCCCCCCCHHHHHEEEEECCCCEEEECCCCCCCCCEE
NVHDLPPLPASKSIARYLIDVYVARRLGHAEPVLPG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSRWTTAVLDTDQPGGWAVARSPEGFLFDDNGVLFPREWLKRQDLSILAEHGIGHLDGE
CCCEEEEEEECCCCCCEEEEECCCCCEECCCCEECCHHHHCHHHHHHHHHCCCCCCCCC
PVYLLELHSTSEVPGCNWKGLRAFMLDGDHTIYKVLGYAAQIGTWAREHRFCGNCGQAMT
CEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QVPRERAMYCQPCDLRSYPRISPSMIVLVTRGDEVLLARSPRFVTGVYSTLAGFAEPGES
HCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCC
AEDCLIREVREEVQIEVKNIQYMGSQCWPFPHSMMLGFHAEYAGGEIVCQEDEIEDAQWF
HHHHHHHHHHHHHEEEEEHEEECCCCCCCCCHHHHHEEEEECCCCEEEECCCCCCCCCEE
NVHDLPPLPASKSIARYLIDVYVARRLGHAEPVLPG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA