| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is caiD [C]
Identifier: 77459107
GI number: 77459107
Start: 3323358
End: 3324170
Strand: Reverse
Name: caiD [C]
Synonym: Pfl01_2882
Alternate gene names: 77459107
Gene position: 3324170-3323358 (Counterclockwise)
Preceding gene: 77459108
Following gene: 77459106
Centisome position: 51.63
GC content: 59.53
Gene sequence:
>813_bases ATGACTCAATACACCGCCTTCAGCGTCGAACTGGCCGACAACATCGCCCATGTGCAGATCAATCGTCCGGAAAAGATCAA CTCGATGAACGCCGCGTTCTGGAGCGAAATCGTCGAGGTGTTCCAGTGGATCGACGACACCGACGAAGTGCGGGTGGTGG TGCTCAGCGGTGCCGGTAAACATTTCTCCTCGGGCATCGACCTGATGATGCTGGCCGGTGTGGCCAATGAGCTGGGCAAG GACGTGGGCCGCAATGCGCGCCTGCTGCGCAAAAAGATCCTGACCCTGCAAGCCTCGTTCAATGCGGTCGACAATTGCCG TAAACCGGTACTCGCGGCGATCCAGGGTTATTGCCTGGGCGGCGCTATCGACCTGATCGCCGCCTGCGACATGCGCTACG CCGCCGAAGACGCGCAATTCTCGATCAAGGAAATCGACATCGGCATGGCGGCTGACGTCGGCACCTTGCAACGGTTGCCA CGGATCATCGGTGACGGCATGCTGCGTGAACTGGCTTACACCGGTCGCACCTTTGGCGCCGAAGAAGCGCGCAGCATCGG CCTGGTCAATCGCGTCTACAGCGACAAGGACGGCTTGATCGAAGGCGTGATGGACATTGCCCGGGACATCGCCGGCAAGT CGCCGATCGCGGTCACCGGCACCAAGGAAATGATCAGCTACATGCGCGACCATCGCATTGACGACGGTCTCGAGTACGTT GCCACCTGGAACGCCGCCATGCTGCAATCCAACGATTTGCGCGTGGCCATGGCCGCCCATATGAGCAAACAGAAACCCGA ATTTCTGGATTGA
Upstream 100 bases:
>100_bases GCGGTGAAGAACGGCTAGAGTCCCGCATTTGGCCGAACCGCCGTGCTGATGCCTTGTTATAGTTCGGGCCTCATTTTCAG CCCGGTAAAGGATTTCTGCC
Downstream 100 bases:
>100_bases GAAACCATGACATCTCGCTGGACCACTGCAGTACTGGACACCGATCAACCCGGCGGCTGGGCCGTGGCGCGCAGCCCCGA GGGTTTCCTGTTCGATGACA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTQYTAFSVELADNIAHVQINRPEKINSMNAAFWSEIVEVFQWIDDTDEVRVVVLSGAGKHFSSGIDLMMLAGVANELGK DVGRNARLLRKKILTLQASFNAVDNCRKPVLAAIQGYCLGGAIDLIAACDMRYAAEDAQFSIKEIDIGMAADVGTLQRLP RIIGDGMLRELAYTGRTFGAEEARSIGLVNRVYSDKDGLIEGVMDIARDIAGKSPIAVTGTKEMISYMRDHRIDDGLEYV ATWNAAMLQSNDLRVAMAAHMSKQKPEFLD
Sequences:
>Translated_270_residues MTQYTAFSVELADNIAHVQINRPEKINSMNAAFWSEIVEVFQWIDDTDEVRVVVLSGAGKHFSSGIDLMMLAGVANELGK DVGRNARLLRKKILTLQASFNAVDNCRKPVLAAIQGYCLGGAIDLIAACDMRYAAEDAQFSIKEIDIGMAADVGTLQRLP RIIGDGMLRELAYTGRTFGAEEARSIGLVNRVYSDKDGLIEGVMDIARDIAGKSPIAVTGTKEMISYMRDHRIDDGLEYV ATWNAAMLQSNDLRVAMAAHMSKQKPEFLD >Mature_269_residues TQYTAFSVELADNIAHVQINRPEKINSMNAAFWSEIVEVFQWIDDTDEVRVVVLSGAGKHFSSGIDLMMLAGVANELGKD VGRNARLLRKKILTLQASFNAVDNCRKPVLAAIQGYCLGGAIDLIAACDMRYAAEDAQFSIKEIDIGMAADVGTLQRLPR IIGDGMLRELAYTGRTFGAEEARSIGLVNRVYSDKDGLIEGVMDIARDIAGKSPIAVTGTKEMISYMRDHRIDDGLEYVA TWNAAMLQSNDLRVAMAAHMSKQKPEFLD
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=242, Percent_Identity=49.1735537190083, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI194097323, Length=258, Percent_Identity=27.1317829457364, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI20127408, Length=183, Percent_Identity=31.1475409836066, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31542718, Length=257, Percent_Identity=25.6809338521401, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI260274832, Length=224, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI45643119, Length=224, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI260275230, Length=224, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI68989263, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4502327, Length=254, Percent_Identity=26.3779527559055, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI221136756, Length=224, Percent_Identity=23.2142857142857, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI221136753, Length=224, Percent_Identity=23.2142857142857, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI221307494, Length=224, Percent_Identity=23.2142857142857, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI116235487, Length=148, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI37594469, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI37594471, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI221142681, Length=259, Percent_Identity=30.8880308880309, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787659, Length=250, Percent_Identity=26.8, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1788682, Length=212, Percent_Identity=31.1320754716981, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1787660, Length=258, Percent_Identity=26.7441860465116, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082183, Length=270, Percent_Identity=24.0740740740741, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788597, Length=259, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790281, Length=201, Percent_Identity=25.8706467661692, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17534483, Length=260, Percent_Identity=45, Blast_Score=245, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17536985, Length=261, Percent_Identity=42.911877394636, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17554946, Length=256, Percent_Identity=27.34375, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=29.9610894941634, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17560910, Length=223, Percent_Identity=28.6995515695067, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17540714, Length=215, Percent_Identity=33.0232558139535, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17558304, Length=199, Percent_Identity=30.1507537688442, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI25144276, Length=200, Percent_Identity=30.5, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17508951, Length=200, Percent_Identity=30.5, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17508953, Length=200, Percent_Identity=30.5, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17535521, Length=194, Percent_Identity=23.7113402061856, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17540306, Length=249, Percent_Identity=24.0963855421687, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25141363, Length=182, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=201, Percent_Identity=25.8706467661692, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920382, Length=258, Percent_Identity=43.7984496124031, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI20129971, Length=257, Percent_Identity=26.0700389105058, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24653477, Length=257, Percent_Identity=26.0700389105058, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=27.906976744186, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21357171, Length=187, Percent_Identity=31.5508021390374, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24654903, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650670, Length=210, Percent_Identity=30.952380952381, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI19921000, Length=186, Percent_Identity=26.3440860215054, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24583077, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24583079, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29652; Mature: 29521
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYTAFSVELADNIAHVQINRPEKINSMNAAFWSEIVEVFQWIDDTDEVRVVVLSGAGK CCCEEEEEEEECCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC HFSSGIDLMMLAGVANELGKDVGRNARLLRKKILTLQASFNAVDNCRKPVLAAIQGYCLG HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIDLIAACDMRYAAEDAQFSIKEIDIGMAADVGTLQRLPRIIGDGMLRELAYTGRTFGA HHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCH EEARSIGLVNRVYSDKDGLIEGVMDIARDIAGKSPIAVTGTKEMISYMRDHRIDDGLEYV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH ATWNAAMLQSNDLRVAMAAHMSKQKPEFLD HHCCHHHHCCCCCEEHHHHHHHHCCCCCCC >Mature Secondary Structure TQYTAFSVELADNIAHVQINRPEKINSMNAAFWSEIVEVFQWIDDTDEVRVVVLSGAGK CCEEEEEEEECCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC HFSSGIDLMMLAGVANELGKDVGRNARLLRKKILTLQASFNAVDNCRKPVLAAIQGYCLG HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIDLIAACDMRYAAEDAQFSIKEIDIGMAADVGTLQRLPRIIGDGMLRELAYTGRTFGA HHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCH EEARSIGLVNRVYSDKDGLIEGVMDIARDIAGKSPIAVTGTKEMISYMRDHRIDDGLEYV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH ATWNAAMLQSNDLRVAMAAHMSKQKPEFLD HHCCHHHHCCCCCEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA