| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is efeU [H]
Identifier: 77459097
GI number: 77459097
Start: 3313446
End: 3314285
Strand: Direct
Name: efeU [H]
Synonym: Pfl01_2872
Alternate gene names: 77459097
Gene position: 3313446-3314285 (Clockwise)
Preceding gene: 77459090
Following gene: 77459098
Centisome position: 51.46
GC content: 62.14
Gene sequence:
>840_bases ATGCTCGTTCCCTTTTTAATCATGTTGCGCGAAGGCATCGAAGCCGCGCTGATCGTTGGCATCATCGCCAGCTACCTGCA ACAGACCGGCCGTGGCCAGTGGATGCCGGCGGTGTGGATCGGGGTGTTTCTCGCTGCTGCGCTGGCGTTGCTGGTCGGCG GTGGCCTGGAGCTGGTCAGTGCCGAATTCCCGCAAAAGCAGCAGGAACTGTTCGAAGGCGTGGTCGGCCTCGTCGCTGTG GGCATTCTCAGTTCAATGGTGTTCTGGATGCGCAAGGTGGCGCGTTCGATCAAGCATTCACTGCAAGCCTCCCTCGATCA TGCGCTGACCGCGTCGAAGCATCAGGTCATCGCGTTGATCGCCATGGTGTTCTTTGCCGTGGCCCGGGAAGGTCTGGAAA CCGTGTTCTTCCTGCTCGCCGTGTTCCAGCAGAGCGAAGGCCCGGCCGCGCCGATCGGCGCCCTGCTCGGCCTGATCCTG GCGATTGTCGTCGGCTTCCTGATCTACAGCGGCAGCATGCGCCTGAACCTGTCGGCGTTCTTCCGCTGGACCGGGCTGTT CATCCTCGTGGTCGCCGCCGGGATTCTCGCCAACTCGGTGCAGGCCCTACATGAAGCCGGGGTCTGGAACCACCTGCAAG CCGTGCTCTTCGACTTCAGCGCGACGCTGCCGATGGACGGCCCGCTGGGCTCGGTGCTGGCCGGCATGTTCGGTTATCAG GATGCACCGACCGTCAGCACCCTTGGCGCGTACCTGATTTATCTGCTGGTGGCGCTGGTCATGTTCTTCATGCCGGCACC CAAGCCTGCTGCCCAATCGTCTTCCGTTTCCAGCCAATAA
Upstream 100 bases:
>100_bases GTTCAGCTCCGGTTCAGCTAAATGTCAATGAATGCCATGTGAGAATGACTTTCATTATGTTACAACTTGTAACCTCATTT CGTTACACAGTGATCGTCGA
Downstream 100 bases:
>100_bases GGGCCTTCATGTCAAAGCCTAATACTCCTCAGGCCTCGCCTCCCCGCGCCTTGCGCTGGGCGGTGGCCGGTTCGGTGGTC GTGATGATCGCCGCCGGTGG
Product: Iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLVPFLIMLREGIEAALIVGIIASYLQQTGRGQWMPAVWIGVFLAAALALLVGGGLELVSAEFPQKQQELFEGVVGLVAV GILSSMVFWMRKVARSIKHSLQASLDHALTASKHQVIALIAMVFFAVAREGLETVFFLLAVFQQSEGPAAPIGALLGLIL AIVVGFLIYSGSMRLNLSAFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQAVLFDFSATLPMDGPLGSVLAGMFGYQ DAPTVSTLGAYLIYLLVALVMFFMPAPKPAAQSSSVSSQ
Sequences:
>Translated_279_residues MLVPFLIMLREGIEAALIVGIIASYLQQTGRGQWMPAVWIGVFLAAALALLVGGGLELVSAEFPQKQQELFEGVVGLVAV GILSSMVFWMRKVARSIKHSLQASLDHALTASKHQVIALIAMVFFAVAREGLETVFFLLAVFQQSEGPAAPIGALLGLIL AIVVGFLIYSGSMRLNLSAFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQAVLFDFSATLPMDGPLGSVLAGMFGYQ DAPTVSTLGAYLIYLLVALVMFFMPAPKPAAQSSSVSSQ >Mature_279_residues MLVPFLIMLREGIEAALIVGIIASYLQQTGRGQWMPAVWIGVFLAAALALLVGGGLELVSAEFPQKQQELFEGVVGLVAV GILSSMVFWMRKVARSIKHSLQASLDHALTASKHQVIALIAMVFFAVAREGLETVFFLLAVFQQSEGPAAPIGALLGLIL AIVVGFLIYSGSMRLNLSAFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQAVLFDFSATLPMDGPLGSVLAGMFGYQ DAPTVSTLGAYLIYLLVALVMFFMPAPKPAAQSSSVSSQ
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320993, Length=295, Percent_Identity=23.3898305084746, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 29724; Mature: 29724
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPFLIMLREGIEAALIVGIIASYLQQTGRGQWMPAVWIGVFLAAALALLVGGGLELVS CHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH AEFPQKQQELFEGVVGLVAVGILSSMVFWMRKVARSIKHSLQASLDHALTASKHQVIALI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVFFAVAREGLETVFFLLAVFQQSEGPAAPIGALLGLILAIVVGFLIYSGSMRLNLSAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH FRWTGLFILVVAAGILANSVQALHEAGVWNHLQAVLFDFSATLPMDGPLGSVLAGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DAPTVSTLGAYLIYLLVALVMFFMPAPKPAAQSSSVSSQ CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVPFLIMLREGIEAALIVGIIASYLQQTGRGQWMPAVWIGVFLAAALALLVGGGLELVS CHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH AEFPQKQQELFEGVVGLVAVGILSSMVFWMRKVARSIKHSLQASLDHALTASKHQVIALI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVFFAVAREGLETVFFLLAVFQQSEGPAAPIGALLGLILAIVVGFLIYSGSMRLNLSAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH FRWTGLFILVVAAGILANSVQALHEAGVWNHLQAVLFDFSATLPMDGPLGSVLAGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DAPTVSTLGAYLIYLLVALVMFFMPAPKPAAQSSSVSSQ CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA