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The map label for this gene is yecS [H]

Identifier: 77459078

GI number: 77459078

Start: 3291590

End: 3292468

Strand: Direct

Name: yecS [H]

Synonym: Pfl01_2853

Alternate gene names: 77459078

Gene position: 3291590-3292468 (Clockwise)

Preceding gene: 77459077

Following gene: 77459079

Centisome position: 51.12

GC content: 60.86

Gene sequence:

>879_bases
ATGAGCCAGACTCAGGCAGAACGACTCCAGGCGGAGCGCAAACTGGCGGAAAACCAGTTCGACATTACCCAGTACCAGCA
TGTGCCACGGCGTTATTACGGGCGGATCTTCTTCGCCACCGTGATCGTCATCGCGATCATCGGTCTGGTGCGGGCCTTCG
CCGAAGGCAAGATCGAATGGTCGTACATCGGCCAGTTCCTCACCTCCGAAGCGATCATGTGGGGCCTGTTCAACACGATC
ATCATGGCCGTGCTGGCCATGGCACTCGGCATCGTGTTCGGCGTGATCACCGCGATCATGCGCATGTCGGCCAACCCGAT
CCTGCGCTACGTGGCCGTGACCTACACCTGGCTGTTTCGCGGTACGCCGCTGATTCTGCAACTGCTGTTGTGGTTCAACC
TGGCGCTGATCTTCCCCACCATCGGCATTCCCGGCCTGTTCGAACTCGACACCGTGAGTTTGATGACCCCGTTCGTGGCC
GCCCTGCTCGGCTTGAGCATCAATCAGGGCGCCTACACCGCTGAAGTGGTGCGCGCCGGCCTGCTCTCGGTGGACACCGG
CCAGTACGAAGCCGCCAAGTCGATCGGTATGCCGCGCCTGCAAGCACTGCGCCGGATCATCCTGCCCCAGGCCATGCGGA
TCATCATTCCGCCGGTGGGCAACGAATTCATCGGCATGGTGAAAATGACCTCGCTGGCGAGCGTCATCCAGTACTCGGAA
CTGCTCTACAACGCCCAGAACATTTACTACGCCAACGCCCGGGTCATGGAGCTGCTGATCGTCGCCGGTATCTGGTACCT
GGCCACCGTCACCGTCCTGTCCTTTGGTCAAAGCCGTCTGGAGCGTCGTTTCGCTCGCGGCGCCGGCAAGCGTTCTTGA

Upstream 100 bases:

>100_bases
CAGCAGTGGACCGAAAACTACCAGGGCTTCCGCCTCTAAGCCGGGTCCCCCTCCCACCGGGAGGGGGTTGATCGAAAAGT
ACAGTGTACGGAGAAACACC

Downstream 100 bases:

>100_bases
GGAATCCGTCATGAGAAGCATCGTCAAGGCCGTGAGCCTGAACAAATATTACGACCAGTACCACGCGCTCAAGGACATCA
ACATCGAAGTCGAGCAAGGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSQTQAERLQAERKLAENQFDITQYQHVPRRYYGRIFFATVIVIAIIGLVRAFAEGKIEWSYIGQFLTSEAIMWGLFNTI
IMAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFRGTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVA
ALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSE
LLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGKRS

Sequences:

>Translated_292_residues
MSQTQAERLQAERKLAENQFDITQYQHVPRRYYGRIFFATVIVIAIIGLVRAFAEGKIEWSYIGQFLTSEAIMWGLFNTI
IMAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFRGTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVA
ALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSE
LLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGKRS
>Mature_291_residues
SQTQAERLQAERKLAENQFDITQYQHVPRRYYGRIFFATVIVIAIIGLVRAFAEGKIEWSYIGQFLTSEAIMWGLFNTII
MAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFRGTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVAA
LLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSEL
LYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGKRS

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=42.1052631578947, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=35.9223300970874, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=31.9444444444444, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788645, Length=223, Percent_Identity=30.9417040358744, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788646, Length=226, Percent_Identity=30.9734513274336, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=32.8703703703704, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=35.0877192982456, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=29.5774647887324, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=30.2325581395349, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787087, Length=222, Percent_Identity=24.7747747747748, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32659; Mature: 32528

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTQAERLQAERKLAENQFDITQYQHVPRRYYGRIFFATVIVIAIIGLVRAFAEGKIEW
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SYIGQFLTSEAIMWGLFNTIIMAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVAALLGLSINQGAYTAEVVRAG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSE
HHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
LLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGKRS
HHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SQTQAERLQAERKLAENQFDITQYQHVPRRYYGRIFFATVIVIAIIGLVRAFAEGKIEW
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SYIGQFLTSEAIMWGLFNTIIMAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVAALLGLSINQGAYTAEVVRAG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSE
HHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
LLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGKRS
HHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]