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The map label for this gene is arnC

Identifier: 77459067

GI number: 77459067

Start: 3279023

End: 3280045

Strand: Direct

Name: arnC

Synonym: Pfl01_2842

Alternate gene names: 77459067

Gene position: 3279023-3280045 (Clockwise)

Preceding gene: 77459066

Following gene: 77459068

Centisome position: 50.93

GC content: 63.73

Gene sequence:

>1023_bases
GTGAGACCTTATCCGATTCATTGCGTGTCGATCGTCATCCCGGTCTACAACGAAGAAGACAGCCTGCCGGAACTGCTGCG
CCGCACCGAAGCCGCCTGCAAGCAACTGCGTCATGACTACGAAATCGTGCTGGTCGACGACGGCAGCCGCGACGCCTCCG
CGCAATTGCTCGAAGAAGCGGCCTCGGTCGTGGACAGCCCGTTCGTGGCAGTCATCCTCAACCGCAACTACGGTCAGCAC
GCGGCGATCATGGCCGGTTTCGAACAGTGCAAGGGCGACGTGGTGATCACCCTCGACGCCGACCTGCAGAACCCGCCGGA
AGAAATCCCGCGCCTGGTGGCCGAGGCCGAAAAGGGCTTTGACGTGGTCGGCACCGTGCGCGGCAACCGTCAGGATTCGG
CGCTGCGCCGTTATCCGTCGAAACTCATCAACCTCGCGGTGCAGCGCTCCACCGGCGTCGCCATGAGCGACTACGGCTGC
ATGCTGCGCGCCTACCGCCGCACCATCATCGACGCGATGCTCGCCTGTCGCGAGCGCAGCACGTTCATTCCGATCCTTGC
CAACAGCTTCGCCCGCCACACTACGGAAATCCCCGTGGCCCACGCCGAGCGCGAACACGGTGATTCGAAATACAGCCCGA
TGCGCCTGATCAACCTGATGTTCGACTTGATCACCTGCATGACCACCACGCCCCTGCGCCTGCTGAGCATTGTCGGTTTC
GCCATGGCCGGGCTCGGCGTGCTGTTTGCGGCGGCGCTGATCTTCATGCGCCTGGCGTTTGGCGCCGGATGGGCCGGCGA
TGGCCTGTTCGTGCTGTTCGCCGTGCTGTTCGTGTTCACCGGCGGCCAATTCATCGGCATGGGGCTGCTGGGTGAGTACC
TGGGCCGCATGTACAGCGACGTGCGCGCCCGCCCGCGTTTCTTCATTGAAAAAGTCCTGCGCGGCCATCCCGCCACGCCG
GCCCCCGCCATCACCGTTGACGGCCTCACTTCCAACTCCACGTCTGATCAGGTTCTCTCATGA

Upstream 100 bases:

>100_bases
ACTCGGCGCGGCTGTGCTCGATTCCCTTGTTTCCCGACATGACCGACCAGGATCTGGACCGGGTCGTCGGGGCCATTGAA
CACCTGATGGGGAAACGCCC

Downstream 100 bases:

>100_bases
GCGCAAAAACCGTTGTCTTCGCTTACCACGATATTGGCTGCGCCGGCATTCAAGCCCTGCTCGACAGTGGCTATGACATT
GCGGCGGTGTTTACCCATGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRPYPIHCVSIVIPVYNEEDSLPELLRRTEAACKQLRHDYEIVLVDDGSRDASAQLLEEAASVVDSPFVAVILNRNYGQH
AAIMAGFEQCKGDVVITLDADLQNPPEEIPRLVAEAEKGFDVVGTVRGNRQDSALRRYPSKLINLAVQRSTGVAMSDYGC
MLRAYRRTIIDAMLACRERSTFIPILANSFARHTTEIPVAHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIVGF
AMAGLGVLFAAALIFMRLAFGAGWAGDGLFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKVLRGHPATP
APAITVDGLTSNSTSDQVLS

Sequences:

>Translated_340_residues
MRPYPIHCVSIVIPVYNEEDSLPELLRRTEAACKQLRHDYEIVLVDDGSRDASAQLLEEAASVVDSPFVAVILNRNYGQH
AAIMAGFEQCKGDVVITLDADLQNPPEEIPRLVAEAEKGFDVVGTVRGNRQDSALRRYPSKLINLAVQRSTGVAMSDYGC
MLRAYRRTIIDAMLACRERSTFIPILANSFARHTTEIPVAHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIVGF
AMAGLGVLFAAALIFMRLAFGAGWAGDGLFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKVLRGHPATP
APAITVDGLTSNSTSDQVLS
>Mature_340_residues
MRPYPIHCVSIVIPVYNEEDSLPELLRRTEAACKQLRHDYEIVLVDDGSRDASAQLLEEAASVVDSPFVAVILNRNYGQH
AAIMAGFEQCKGDVVITLDADLQNPPEEIPRLVAEAEKGFDVVGTVRGNRQDSALRRYPSKLINLAVQRSTGVAMSDYGC
MLRAYRRTIIDAMLACRERSTFIPILANSFARHTTEIPVAHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIVGF
AMAGLGVLFAAALIFMRLAFGAGWAGDGLFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKVLRGHPATP
APAITVDGLTSNSTSDQVLS

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=24.0343347639485, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1788588, Length=311, Percent_Identity=66.2379421221865, Blast_Score=445, Evalue=1e-126,
Organism=Escherichia coli, GI1788692, Length=308, Percent_Identity=30.5194805194805, Blast_Score=167, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71999402, Length=226, Percent_Identity=26.5486725663717, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325441, Length=119, Percent_Identity=31.0924369747899, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585265, Length=236, Percent_Identity=23.728813559322, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNC_PSEPF (Q3KCC2)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_348573.1
- ProteinModelPortal:   Q3KCC2
- SMR:   Q3KCC2
- STRING:   Q3KCC2
- GeneID:   3712606
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_2842
- eggNOG:   COG0463
- HOGENOM:   HBG752660
- OMA:   ITRITMT
- ProtClustDB:   CLSK868067
- BioCyc:   PFLU205922:PFL_2842-MONOMER
- HAMAP:   MF_01164
- InterPro:   IPR022857
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: =2.7.8.30

Molecular weight: Translated: 37392; Mature: 37392

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf6da9ac)-; HASH(0x114b2650)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYPIHCVSIVIPVYNEEDSLPELLRRTEAACKQLRHDYEIVLVDDGSRDASAQLLEEA
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ASVVDSPFVAVILNRNYGQHAAIMAGFEQCKGDVVITLDADLQNPPEEIPRLVAEAEKGF
HHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVVGTVRGNRQDSALRRYPSKLINLAVQRSTGVAMSDYGCMLRAYRRTIIDAMLACRERS
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TFIPILANSFARHTTEIPVAHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIVGF
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AMAGLGVLFAAALIFMRLAFGAGWAGDGLFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRARPRFFIEKVLRGHPATPAPAITVDGLTSNSTSDQVLS
HHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHCCH
>Mature Secondary Structure
MRPYPIHCVSIVIPVYNEEDSLPELLRRTEAACKQLRHDYEIVLVDDGSRDASAQLLEEA
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ASVVDSPFVAVILNRNYGQHAAIMAGFEQCKGDVVITLDADLQNPPEEIPRLVAEAEKGF
HHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVVGTVRGNRQDSALRRYPSKLINLAVQRSTGVAMSDYGCMLRAYRRTIIDAMLACRERS
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TFIPILANSFARHTTEIPVAHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIVGF
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AMAGLGVLFAAALIFMRLAFGAGWAGDGLFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRARPRFFIEKVLRGHPATPAPAITVDGLTSNSTSDQVLS
HHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA