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The map label for this gene is arnB

Identifier: 77459066

GI number: 77459066

Start: 3277878

End: 3279026

Strand: Direct

Name: arnB

Synonym: Pfl01_2841

Alternate gene names: 77459066

Gene position: 3277878-3279026 (Clockwise)

Preceding gene: 77459064

Following gene: 77459067

Centisome position: 50.91

GC content: 63.45

Gene sequence:

>1149_bases
ATGAGTCAGGCGTTTCTCCCCTTCTCCCGCCCCAGTATCGGTGATGAAGAAATTGCCGCCGTGGAGCAAGTCCTGCGCTC
CGGCTGGATCACCACCGGGCCGAAAAACCAGGCCCTCGAAGAACAATTTGCCCAGTACGTCGGCAGTCGTCATGCCGTGG
CACTTTCCTCGGCCACCGGTGCCATGCATGTAACGTTACTGGCGTTGGGAATCGGCCCCGGCGATGAAGTCATCACCCCG
TCGCAGACCTGGGTGTCGACCGCCAACATGATCTCGCTGCTCGGCGCCACGCCGGTGTTCGTCGATGTCGACCGCGACAC
CCTGATGACCGACGCCGCGCGCATCGAAGCCGCCATCACCCCGCGCACCAAAGCAATCATTCCGGTGCATTACGCTGGCG
CCGCGTTTGATCTCGACCCGCTCTACGCGCTGGCCGACAAGCATGGTATCGCCGTGATCGAAGACGCCGCCCACGCCGCC
GGCACCCGCTACAAGGGTCGTCACGTCGGCTCGCAAGGCACCGCAATCTTTTCTTTCCACGCGATCAAGAACATGACCTG
CGCCGAAGGCGCGATGTTCGTCACCGACGACGAAGCCCTGGCCAACCGCGTGCGCATGCTCAAGTTCCATGGCCTGGGTG
TCGATGCCTACGACCGCCTGACCCACGGCCGCAAACCCCAGGCCCAGGTGATCGAGCCCGGTTTCAAATACAACCTGGCC
GACATCAACGCCGCGATTGCGCTGGTGCAACTGGAGCGTCTGGACGCAATCAACGCCCGCCGCACCGAGCTGGCCACGCA
ATACCTGCAAAAACTCGAAGGCCTGCCCGTGCAACCGCTGGCCGTGCCGAACTACCCGCAACAGCACGCCTGGCACCTGT
TCATCCTGCGCATCGACAGCGAACGCTGCGGCATGGACCGCGAAGCCTTCATGAAGGGCTTGCAGGAGCAAGGCATCGGC
ACCGGCATCCACTTCATCGCCACCCACCTGCACACCTGGTATCGCCAGCGTGCCCCGCACCTGTCCCTGCCCGACACCGA
GTGGAACTCGGCGCGGCTGTGCTCGATTCCCTTGTTTCCCGACATGACCGACCAGGATCTGGACCGGGTCGTCGGGGCCA
TTGAACACCTGATGGGGAAACGCCCGTGA

Upstream 100 bases:

>100_bases
TTGGCAACTTATTGATGCAAAGGATTTTTTCGCGTCTACGCTTTGATTGGATCCGATTTTTCTGTGGATCTATTTCTTTT
TTCTTTGCAATGAGGTGTGC

Downstream 100 bases:

>100_bases
GACCTTATCCGATTCATTGCGTGTCGATCGTCATCCCGGTCTACAACGAAGAAGACAGCCTGCCGGAACTGCTGCGCCGC
ACCGAAGCCGCCTGCAAGCA

Product: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQALEEQFAQYVGSRHAVALSSATGAMHVTLLALGIGPGDEVITP
SQTWVSTANMISLLGATPVFVDVDRDTLMTDAARIEAAITPRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAA
GTRYKGRHVGSQGTAIFSFHAIKNMTCAEGAMFVTDDEALANRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLA
DINAAIALVQLERLDAINARRTELATQYLQKLEGLPVQPLAVPNYPQQHAWHLFILRIDSERCGMDREAFMKGLQEQGIG
TGIHFIATHLHTWYRQRAPHLSLPDTEWNSARLCSIPLFPDMTDQDLDRVVGAIEHLMGKRP

Sequences:

>Translated_382_residues
MSQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQALEEQFAQYVGSRHAVALSSATGAMHVTLLALGIGPGDEVITP
SQTWVSTANMISLLGATPVFVDVDRDTLMTDAARIEAAITPRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAA
GTRYKGRHVGSQGTAIFSFHAIKNMTCAEGAMFVTDDEALANRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLA
DINAAIALVQLERLDAINARRTELATQYLQKLEGLPVQPLAVPNYPQQHAWHLFILRIDSERCGMDREAFMKGLQEQGIG
TGIHFIATHLHTWYRQRAPHLSLPDTEWNSARLCSIPLFPDMTDQDLDRVVGAIEHLMGKRP
>Mature_381_residues
SQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQALEEQFAQYVGSRHAVALSSATGAMHVTLLALGIGPGDEVITPS
QTWVSTANMISLLGATPVFVDVDRDTLMTDAARIEAAITPRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAAG
TRYKGRHVGSQGTAIFSFHAIKNMTCAEGAMFVTDDEALANRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLAD
INAAIALVQLERLDAINARRTELATQYLQKLEGLPVQPLAVPNYPQQHAWHLFILRIDSERCGMDREAFMKGLQEQGIGT
GIHFIATHLHTWYRQRAPHLSLPDTEWNSARLCSIPLFPDMTDQDLDRVVGAIEHLMGKRP

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily

Homologues:

Organism=Escherichia coli, GI145693159, Length=376, Percent_Identity=67.5531914893617, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI2367285, Length=377, Percent_Identity=33.9522546419098, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNB_PSEPF (Q3KCC3)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_348572.1
- HSSP:   Q8ZNF3
- ProteinModelPortal:   Q3KCC3
- SMR:   Q3KCC3
- STRING:   Q3KCC3
- GeneID:   3712605
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_2841
- eggNOG:   COG0399
- HOGENOM:   HBG660897
- OMA:   SEWNSAR
- ProtClustDB:   PRK11658
- BioCyc:   PFLU205922:PFL_2841-MONOMER
- HAMAP:   MF_01167
- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.40.640.10
- Gene3D:   G3DSA:3.90.1150.10
- PIRSF:   PIRSF000390

Pfam domain/function: PF01041 DegT_DnrJ_EryC1; SSF53383 PyrdxlP-dep_Trfase_major

EC number: =2.6.1.87

Molecular weight: Translated: 41915; Mature: 41784

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQALEEQFAQYVGSRHAVALSSATG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
AMHVTLLALGIGPGDEVITPSQTWVSTANMISLLGATPVFVDVDRDTLMTDAARIEAAIT
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHEEEEC
PRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAAGTRYKGRHVGSQGTAIFSFH
CCCCEEEEEEECCCEECCCHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCEEEEEH
AIKNMTCAEGAMFVTDDEALANRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLA
HHCCCCCCCCEEEEECCHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHHHCCCCCEEEHH
DINAAIALVQLERLDAINARRTELATQYLQKLEGLPVQPLAVPNYPQQHAWHLFILRIDS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
ERCGMDREAFMKGLQEQGIGTGIHFIATHLHTWYRQRAPHLSLPDTEWNSARLCSIPLFP
HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC
DMTDQDLDRVVGAIEHLMGKRP
CCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQALEEQFAQYVGSRHAVALSSATG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
AMHVTLLALGIGPGDEVITPSQTWVSTANMISLLGATPVFVDVDRDTLMTDAARIEAAIT
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHEEEEC
PRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAAGTRYKGRHVGSQGTAIFSFH
CCCCEEEEEEECCCEECCCHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCEEEEEH
AIKNMTCAEGAMFVTDDEALANRVRMLKFHGLGVDAYDRLTHGRKPQAQVIEPGFKYNLA
HHCCCCCCCCEEEEECCHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHHHCCCCCEEEHH
DINAAIALVQLERLDAINARRTELATQYLQKLEGLPVQPLAVPNYPQQHAWHLFILRIDS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
ERCGMDREAFMKGLQEQGIGTGIHFIATHLHTWYRQRAPHLSLPDTEWNSARLCSIPLFP
HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCC
DMTDQDLDRVVGAIEHLMGKRP
CCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA