| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is exoP [H]
Identifier: 77459040
GI number: 77459040
Start: 3243985
End: 3246297
Strand: Direct
Name: exoP [H]
Synonym: Pfl01_2815
Alternate gene names: 77459040
Gene position: 3243985-3246297 (Clockwise)
Preceding gene: 77459039
Following gene: 77459041
Centisome position: 50.38
GC content: 60.01
Gene sequence:
>2313_bases ATGGACAACAGCCCCAGCAACTACGTCGAACGTCCTCTTCAAGCGCATCTGCATCCGCAGCACGGCGACGACAAGGACAC CCTGGATCTGCTCAATCTGTGGAGGATTATCTGGCGCGCCAAGTGGCGCATCGGCTGGCTGGTTCTGCTGAGTTGCGTAT TGGCGGCCGTGGTGGTCTCCAATATCACGCCGCAATACATTGGCAGCACCACCCTGCTGTTCAACGACAAAACACCTCCG CTGATGTCGTTCCAGCAAGTCAAGGACTCAGGCGGCAACGCCACAGATTACTTGCAGACTCAGCAGGCGCTCCTGCAATC GCGGGACCTTGCCGAACGCGCGGTGAAAAAACTCGGCCTGACGACCCACCCGGTCACCGATCCACGCCAGCAGCCCCAAC CCTGGTTTGCTCCGCGCCAATGGCTGGCCAACCTGGACCTTGATCAATGGATCCCGGGACTCGGTCGATATTTGCCGCAA AAGAAAGAGCAGCTCACGGAAGCGGACGTCTTCAATCAGGTCACGCAGAACCTCATGCTGCACACCAGCGTCAAGTTCGT TGGCAAAAGCCAGTTGCTCGAAATCGAAGTCGAACTGCCAGACCCTGTTCTGGCAGCGGCGGCGGCCAACGCGCTGGCTC AGGGCTTCACCGACAGCCAGCTCGATACCAGCGAGAAATCGTCGCAAACCACCACAGCCTGGATGAACACGCGTCTGATC AAGCTGCGCGACAACCTGCGTGCGGCCGAGAAAAAGCTTCAGGGTTACCGCGAAGAACAAGGTCTGGTGGATGTTGGCGG TGTTGCCACCATCAGCGCCAACGAACTGGAAATGACCGGTAATCGCATGGTCGACGCCCGGCGCAACCGTGCTGAAGCCG AGAGCGAGTACCGCCAGGCCAAGGCCCTGGGCAACGGCGATCTGAGCCGGCTCTCCAGCGTGCCTGCGGTCTTGAGCAAT CCCCTGGTGCAGAAATTCCAGGCCGATCGCGCTGTGGCTCAGGCCAAGGTTGATGAACTGGCGGGCCGCTATGGTCCAAA GCACCCCAGCCTGATTTCCGCACAAACCGAGTTGCGCACCGCCACCACCAGCCTGCAATTGCAGGTGCAGCAAGTGGTGG CCGGTATCGAGCGGCAATACCAGCTCGCCACGGCGAGCGAAGCGTCGCTGCGTCAATCCTTCAACAGCAACAAGGCGCAA ATCCAGGACATCGCGCGCAAAGAGTTCCAGTTGCGCGAGTTCCAGCGTGAAGTCGACAGCACGCGCGCACTGTATGAAAC CTTCGTCACCCGCCTGAAAGAAACCACGGCCACCGCCGACATGGACTCGACGAAAGTGCGCATCGTCGACCCGGCCATTG TGCCTGTCGACGCCAGCAAGCCCCGCAAGACATTGATTGTCGGGATCGTCGGGCTGATCGCTGCGGTCATCGGCGTCGGG CTGGCACTGCTCTTCGAGAGTCTGAGCAATACCTTCAAAACCGATGAGACGGTCGAGAGCGTGTTGAATGTTCCACTGCT CAGCGTCGTGCCGTTGGTGGTGAAAAAAAGTCGCCGGCAACTGGCGCGCCTTTTCGAAGACAACGACAACCCGCGTTTTT CCGAGACCATTCGCAACCTGCGTACCTGGCTGATGCTGCAAAGCAGCGAAAAGCCCTCACAGGTGGTGCTCGTGACCTCC ACGGTTGCCGGCGAGGGTAAAAGCACCATCGCCACCAATCTGGCCAGTTCACTGACGCCGCTGGAGCGCGTGCTGCTGAT CGATGCCGACATGCGTCAGCCAACCCTGTCGCTGAACTTCGATTTCCCACCGGACAGCCCGGGACTGGCGAATGTCATTG CCGGCACGGCCAGGCTTGAAGACTGCATTGTTTCAGTGGGCAATCTGGACATGCTGCCGGCCGGGAAGGTCTTGCCGCCG TCACTGGATATGTTCGTTGCACCGCGCCTGCCATCCCCTGGCGATCCGCTCAACCCGGTCCAGCCACCGCCACAGGACTT GCTCAGCTCGCCCCGCATGGCGCGCATGCTCGAGGCGCTCAGATCACGCTATCGCCACATCATTATCGACTCTCCCCCTG CGGAGATGATCAGTGACGCGCTGTTGCTGGCCAGACATTCCGATGCGGTGATCTATGTCGTCAAGGCTGACAGCACCTCG ATCAGCCAGGTTCAGCGAGGGATTGCCATGTTGCAACAAAGCCATGTGCCGGTCTTTGGCACGGTGCTCAACCAGGTCGA CCTGCGCAAGGCGCGCAAGTACGGCTACCACCATTCCCGGGCGTTCTATAACTACGATTTCGCGCCCAGGTAA
Upstream 100 bases:
>100_bases TGCGCGGTGATGGTGGCGCGACCGTGACCGATAACGTCACGCGCAGCACCACGATTGCCCCCGGCGATACCATTTCCATT GCACAAGGCTTTTTCTGATC
Downstream 100 bases:
>100_bases CCATCGGGCGGATACGCCCGCCGCTACGCCCTCTTCTGCCAACGCACCACTCGCTTCACCTCCGCCGAGCTACGGAAAAG CCATCGGGAGGCACGCCGTG
Product: lipopolysaccharide biosynthesis protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MDNSPSNYVERPLQAHLHPQHGDDKDTLDLLNLWRIIWRAKWRIGWLVLLSCVLAAVVVSNITPQYIGSTTLLFNDKTPP LMSFQQVKDSGGNATDYLQTQQALLQSRDLAERAVKKLGLTTHPVTDPRQQPQPWFAPRQWLANLDLDQWIPGLGRYLPQ KKEQLTEADVFNQVTQNLMLHTSVKFVGKSQLLEIEVELPDPVLAAAAANALAQGFTDSQLDTSEKSSQTTTAWMNTRLI KLRDNLRAAEKKLQGYREEQGLVDVGGVATISANELEMTGNRMVDARRNRAEAESEYRQAKALGNGDLSRLSSVPAVLSN PLVQKFQADRAVAQAKVDELAGRYGPKHPSLISAQTELRTATTSLQLQVQQVVAGIERQYQLATASEASLRQSFNSNKAQ IQDIARKEFQLREFQREVDSTRALYETFVTRLKETTATADMDSTKVRIVDPAIVPVDASKPRKTLIVGIVGLIAAVIGVG LALLFESLSNTFKTDETVESVLNVPLLSVVPLVVKKSRRQLARLFEDNDNPRFSETIRNLRTWLMLQSSEKPSQVVLVTS TVAGEGKSTIATNLASSLTPLERVLLIDADMRQPTLSLNFDFPPDSPGLANVIAGTARLEDCIVSVGNLDMLPAGKVLPP SLDMFVAPRLPSPGDPLNPVQPPPQDLLSSPRMARMLEALRSRYRHIIIDSPPAEMISDALLLARHSDAVIYVVKADSTS ISQVQRGIAMLQQSHVPVFGTVLNQVDLRKARKYGYHHSRAFYNYDFAPR
Sequences:
>Translated_770_residues MDNSPSNYVERPLQAHLHPQHGDDKDTLDLLNLWRIIWRAKWRIGWLVLLSCVLAAVVVSNITPQYIGSTTLLFNDKTPP LMSFQQVKDSGGNATDYLQTQQALLQSRDLAERAVKKLGLTTHPVTDPRQQPQPWFAPRQWLANLDLDQWIPGLGRYLPQ KKEQLTEADVFNQVTQNLMLHTSVKFVGKSQLLEIEVELPDPVLAAAAANALAQGFTDSQLDTSEKSSQTTTAWMNTRLI KLRDNLRAAEKKLQGYREEQGLVDVGGVATISANELEMTGNRMVDARRNRAEAESEYRQAKALGNGDLSRLSSVPAVLSN PLVQKFQADRAVAQAKVDELAGRYGPKHPSLISAQTELRTATTSLQLQVQQVVAGIERQYQLATASEASLRQSFNSNKAQ IQDIARKEFQLREFQREVDSTRALYETFVTRLKETTATADMDSTKVRIVDPAIVPVDASKPRKTLIVGIVGLIAAVIGVG LALLFESLSNTFKTDETVESVLNVPLLSVVPLVVKKSRRQLARLFEDNDNPRFSETIRNLRTWLMLQSSEKPSQVVLVTS TVAGEGKSTIATNLASSLTPLERVLLIDADMRQPTLSLNFDFPPDSPGLANVIAGTARLEDCIVSVGNLDMLPAGKVLPP SLDMFVAPRLPSPGDPLNPVQPPPQDLLSSPRMARMLEALRSRYRHIIIDSPPAEMISDALLLARHSDAVIYVVKADSTS ISQVQRGIAMLQQSHVPVFGTVLNQVDLRKARKYGYHHSRAFYNYDFAPR >Mature_770_residues MDNSPSNYVERPLQAHLHPQHGDDKDTLDLLNLWRIIWRAKWRIGWLVLLSCVLAAVVVSNITPQYIGSTTLLFNDKTPP LMSFQQVKDSGGNATDYLQTQQALLQSRDLAERAVKKLGLTTHPVTDPRQQPQPWFAPRQWLANLDLDQWIPGLGRYLPQ KKEQLTEADVFNQVTQNLMLHTSVKFVGKSQLLEIEVELPDPVLAAAAANALAQGFTDSQLDTSEKSSQTTTAWMNTRLI KLRDNLRAAEKKLQGYREEQGLVDVGGVATISANELEMTGNRMVDARRNRAEAESEYRQAKALGNGDLSRLSSVPAVLSN PLVQKFQADRAVAQAKVDELAGRYGPKHPSLISAQTELRTATTSLQLQVQQVVAGIERQYQLATASEASLRQSFNSNKAQ IQDIARKEFQLREFQREVDSTRALYETFVTRLKETTATADMDSTKVRIVDPAIVPVDASKPRKTLIVGIVGLIAAVIGVG LALLFESLSNTFKTDETVESVLNVPLLSVVPLVVKKSRRQLARLFEDNDNPRFSETIRNLRTWLMLQSSEKPSQVVLVTS TVAGEGKSTIATNLASSLTPLERVLLIDADMRQPTLSLNFDFPPDSPGLANVIAGTARLEDCIVSVGNLDMLPAGKVLPP SLDMFVAPRLPSPGDPLNPVQPPPQDLLSSPRMARMLEALRSRYRHIIIDSPPAEMISDALLLARHSDAVIYVVKADSTS ISQVQRGIAMLQQSHVPVFGTVLNQVDLRKARKYGYHHSRAFYNYDFAPR
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=396, Percent_Identity=26.5151515151515, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1787216, Length=352, Percent_Identity=26.1363636363636, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 85327; Mature: 85327
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSPSNYVERPLQAHLHPQHGDDKDTLDLLNLWRIIWRAKWRIGWLVLLSCVLAAVVVS CCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NITPQYIGSTTLLFNDKTPPLMSFQQVKDSGGNATDYLQTQQALLQSRDLAERAVKKLGL CCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TTHPVTDPRQQPQPWFAPRQWLANLDLDQWIPGLGRYLPQKKEQLTEADVFNQVTQNLML CCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH HTSVKFVGKSQLLEIEVELPDPVLAAAAANALAQGFTDSQLDTSEKSSQTTTAWMNTRLI HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH KLRDNLRAAEKKLQGYREEQGLVDVGGVATISANELEMTGNRMVDARRNRAEAESEYRQA HHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHH KALGNGDLSRLSSVPAVLSNPLVQKFQADRAVAQAKVDELAGRYGPKHPSLISAQTELRT HHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ATTSLQLQVQQVVAGIERQYQLATASEASLRQSFNSNKAQIQDIARKEFQLREFQREVDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TRALYETFVTRLKETTATADMDSTKVRIVDPAIVPVDASKPRKTLIVGIVGLIAAVIGVG HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHH LALLFESLSNTFKTDETVESVLNVPLLSVVPLVVKKSRRQLARLFEDNDNPRFSETIRNL HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RTWLMLQSSEKPSQVVLVTSTVAGEGKSTIATNLASSLTPLERVLLIDADMRQPTLSLNF HHHHHEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHEEECCCCCCEEEEEC DFPPDSPGLANVIAGTARLEDCIVSVGNLDMLPAGKVLPPSLDMFVAPRLPSPGDPLNPV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC QPPPQDLLSSPRMARMLEALRSRYRHIIIDSPPAEMISDALLLARHSDAVIYVVKADSTS CCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEECCCEEEEEEECCCCH ISQVQRGIAMLQQSHVPVFGTVLNQVDLRKARKYGYHHSRAFYNYDFAPR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure MDNSPSNYVERPLQAHLHPQHGDDKDTLDLLNLWRIIWRAKWRIGWLVLLSCVLAAVVVS CCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NITPQYIGSTTLLFNDKTPPLMSFQQVKDSGGNATDYLQTQQALLQSRDLAERAVKKLGL CCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TTHPVTDPRQQPQPWFAPRQWLANLDLDQWIPGLGRYLPQKKEQLTEADVFNQVTQNLML CCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH HTSVKFVGKSQLLEIEVELPDPVLAAAAANALAQGFTDSQLDTSEKSSQTTTAWMNTRLI HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH KLRDNLRAAEKKLQGYREEQGLVDVGGVATISANELEMTGNRMVDARRNRAEAESEYRQA HHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHH KALGNGDLSRLSSVPAVLSNPLVQKFQADRAVAQAKVDELAGRYGPKHPSLISAQTELRT HHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ATTSLQLQVQQVVAGIERQYQLATASEASLRQSFNSNKAQIQDIARKEFQLREFQREVDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TRALYETFVTRLKETTATADMDSTKVRIVDPAIVPVDASKPRKTLIVGIVGLIAAVIGVG HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHH LALLFESLSNTFKTDETVESVLNVPLLSVVPLVVKKSRRQLARLFEDNDNPRFSETIRNL HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RTWLMLQSSEKPSQVVLVTSTVAGEGKSTIATNLASSLTPLERVLLIDADMRQPTLSLNF HHHHHEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHEEECCCCCCEEEEEC DFPPDSPGLANVIAGTARLEDCIVSVGNLDMLPAGKVLPPSLDMFVAPRLPSPGDPLNPV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC QPPPQDLLSSPRMARMLEALRSRYRHIIIDSPPAEMISDALLLARHSDAVIYVVKADSTS CCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEECCCEEEEEEECCCCH ISQVQRGIAMLQQSHVPVFGTVLNQVDLRKARKYGYHHSRAFYNYDFAPR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]