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The map label for this gene is soxA [H]

Identifier: 77459025

GI number: 77459025

Start: 3226286

End: 3227659

Strand: Reverse

Name: soxA [H]

Synonym: Pfl01_2800

Alternate gene names: 77459025

Gene position: 3227659-3226286 (Counterclockwise)

Preceding gene: 77459026

Following gene: 77459024

Centisome position: 50.13

GC content: 60.77

Gene sequence:

>1374_bases
ATGTCCGATCCTAAACCTCTGCTGTTTGCACTTTATGAACAAGCCAGCGTCGGGTGCGGCGGTGCGCCGAGTCTGTGGAC
GCACCCGGCTGACGAACGCCTGGCGATCAATTCGCTGGGCTACTGGTCAAACCTGGCGCGGATTGCCGATCAGGCGCACC
TCGATATGTTGTTCTTTGGTGATGTGCTGGGCTTCTACGATGTGCTGGGTGGCAACGCCGATGCGGCAGTGAAATGGGCG
GTGGAGGCACCGGCCAACGATCCGTTGATGATCATTCCGGCGTTGGCGGCCGTGACGGAAAACCTGGCGTTTGGTGTCAC
GGTGACCACCAGTTATGAGCACCCGTTTACCCACGCCCGGCGCTTCAGCACGCTTGATCACCTCACCAATGGGCGAGTGG
GGTGGAATATCGTCACCTCTTACCTTTCCAGCGCCGCCCGCAATTTCGGGCTGGAGCAAATGATCAAGCATGACGATCGC
TATGAGCGTGCCGAGGAGTTTCTCGATGTGGTGTACAAACTCTGGGAAGGCAGTTGGGCCGACGACGCCGTGGTGGCCGA
CAAGTCCCGCCAGCTGTATGCCAGAGGCGAGCGGGTGCGACCGATCAATCACGAGGGTGCGCACTATCGCGTGGCCGGGC
CGCACCTGACCGCTCCGTCCCCGCAGCGCACCCCGTTGCTGATTCAGGCGGGCTGGTCGGGACGCGGTCGAGAGTTCGCC
GCCAAGCATGCGGAACTGATCTTCATCGCCAAATCCAACCCGCAGGAAATCCGTCAGGGCCTGGAAGACATCTGGGCCCA
GGCTCAGGCGCGTGGGCGTCAACGTGAAGACGTTAAATCGCTGACGGTATTGCGCATCGTCACGGCCAAAACCGAAATCG
AAGCCCAGCGCAAATACGACGAGCTGCAAAGCAACTATCACTTGCAGGCACAACTGGTCAGTTACGCCGGCGACACCGGC
ATCGACATCAGCCGCTACGCCGACAGCGATGCGCTATCGACGCACACCGAAGGCCTGACCTCATACGTCATGCGCCCCGA
TGGCAGTGGCAAGCCGCTGACGGCGGGTGATGTGAAAAAGCGCTTCGCCAGCGTTACCCGTGGCAGCGACCTGATTCTCG
TCGGAACACCGCAGCAAGTCGCCGATCGCATCGAAGAGCACGCGCGAATTTCCGGCACCAGCGGCTACATGCTCAACCCG
TTGATCAGCCCAGGCAGCCTTGAGGACTTTGTCGAACTGGTGATTCCCGAACTGCAAAAGCGTGGGCTGTACCGGACTCA
ACCGCAGAGTGGCACTTTCCGTTCGCGGTTGCGGGAAGACCGCTCCAGTCACCTGCCTGAGTCGGCCTATGGGGCTTCGT
TCCGCTTCGACTAG

Upstream 100 bases:

>100_bases
GTCTCGAACTGATCCAGCATCGCCTCGAACGCCATTACGGCAGAGGCTTCAAGCATCAGCGCTGAGCCATTCCGTTAAAT
GATCTCTTGCAGGAACCCAG

Downstream 100 bases:

>100_bases
GCGCTTTAGGGTAGGGGGGAGTCACGCGTCGTGGCGGGCGCAGTGACTCTCATAGAGCTTGCTTGACGTAGGCTTTGCCG
GGCGATGGATCACCATTCGT

Product: hypothetical protein

Products: an aldehyde; SO3; H2O; FMN [C]

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSDPKPLLFALYEQASVGCGGAPSLWTHPADERLAINSLGYWSNLARIADQAHLDMLFFGDVLGFYDVLGGNADAAVKWA
VEAPANDPLMIIPALAAVTENLAFGVTVTTSYEHPFTHARRFSTLDHLTNGRVGWNIVTSYLSSAARNFGLEQMIKHDDR
YERAEEFLDVVYKLWEGSWADDAVVADKSRQLYARGERVRPINHEGAHYRVAGPHLTAPSPQRTPLLIQAGWSGRGREFA
AKHAELIFIAKSNPQEIRQGLEDIWAQAQARGRQREDVKSLTVLRIVTAKTEIEAQRKYDELQSNYHLQAQLVSYAGDTG
IDISRYADSDALSTHTEGLTSYVMRPDGSGKPLTAGDVKKRFASVTRGSDLILVGTPQQVADRIEEHARISGTSGYMLNP
LISPGSLEDFVELVIPELQKRGLYRTQPQSGTFRSRLREDRSSHLPESAYGASFRFD

Sequences:

>Translated_457_residues
MSDPKPLLFALYEQASVGCGGAPSLWTHPADERLAINSLGYWSNLARIADQAHLDMLFFGDVLGFYDVLGGNADAAVKWA
VEAPANDPLMIIPALAAVTENLAFGVTVTTSYEHPFTHARRFSTLDHLTNGRVGWNIVTSYLSSAARNFGLEQMIKHDDR
YERAEEFLDVVYKLWEGSWADDAVVADKSRQLYARGERVRPINHEGAHYRVAGPHLTAPSPQRTPLLIQAGWSGRGREFA
AKHAELIFIAKSNPQEIRQGLEDIWAQAQARGRQREDVKSLTVLRIVTAKTEIEAQRKYDELQSNYHLQAQLVSYAGDTG
IDISRYADSDALSTHTEGLTSYVMRPDGSGKPLTAGDVKKRFASVTRGSDLILVGTPQQVADRIEEHARISGTSGYMLNP
LISPGSLEDFVELVIPELQKRGLYRTQPQSGTFRSRLREDRSSHLPESAYGASFRFD
>Mature_456_residues
SDPKPLLFALYEQASVGCGGAPSLWTHPADERLAINSLGYWSNLARIADQAHLDMLFFGDVLGFYDVLGGNADAAVKWAV
EAPANDPLMIIPALAAVTENLAFGVTVTTSYEHPFTHARRFSTLDHLTNGRVGWNIVTSYLSSAARNFGLEQMIKHDDRY
ERAEEFLDVVYKLWEGSWADDAVVADKSRQLYARGERVRPINHEGAHYRVAGPHLTAPSPQRTPLLIQAGWSGRGREFAA
KHAELIFIAKSNPQEIRQGLEDIWAQAQARGRQREDVKSLTVLRIVTAKTEIEAQRKYDELQSNYHLQAQLVSYAGDTGI
DISRYADSDALSTHTEGLTSYVMRPDGSGKPLTAGDVKKRFASVTRGSDLILVGTPQQVADRIEEHARISGTSGYMLNPL
ISPGSLEDFVELVIPELQKRGLYRTQPQSGTFRSRLREDRSSHLPESAYGASFRFD

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787166, Length=317, Percent_Identity=26.4984227129338, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: 1.14.14.5 [C]

Molecular weight: Translated: 50715; Mature: 50584

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPKPLLFALYEQASVGCGGAPSLWTHPADERLAINSLGYWSNLARIADQAHLDMLFFG
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
DVLGFYDVLGGNADAAVKWAVEAPANDPLMIIPALAAVTENLAFGVTVTTSYEHPFTHAR
HHHHHHHHHCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCEEEEEEEECCCCCHHHHH
RFSTLDHLTNGRVGWNIVTSYLSSAARNFGLEQMIKHDDRYERAEEFLDVVYKLWEGSWA
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
DDAVVADKSRQLYARGERVRPINHEGAHYRVAGPHLTAPSPQRTPLLIQAGWSGRGREFA
CCCEECCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHH
AKHAELIFIAKSNPQEIRQGLEDIWAQAQARGRQREDVKSLTVLRIVTAKTEIEAQRKYD
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHH
ELQSNYHLQAQLVSYAGDTGIDISRYADSDALSTHTEGLTSYVMRPDGSGKPLTAGDVKK
HHHCCCEEEEEHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
RFASVTRGSDLILVGTPQQVADRIEEHARISGTSGYMLNPLISPGSLEDFVELVIPELQK
HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH
RGLYRTQPQSGTFRSRLREDRSSHLPESAYGASFRFD
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCC
>Mature Secondary Structure 
SDPKPLLFALYEQASVGCGGAPSLWTHPADERLAINSLGYWSNLARIADQAHLDMLFFG
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
DVLGFYDVLGGNADAAVKWAVEAPANDPLMIIPALAAVTENLAFGVTVTTSYEHPFTHAR
HHHHHHHHHCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCEEEEEEEECCCCCHHHHH
RFSTLDHLTNGRVGWNIVTSYLSSAARNFGLEQMIKHDDRYERAEEFLDVVYKLWEGSWA
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
DDAVVADKSRQLYARGERVRPINHEGAHYRVAGPHLTAPSPQRTPLLIQAGWSGRGREFA
CCCEECCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHH
AKHAELIFIAKSNPQEIRQGLEDIWAQAQARGRQREDVKSLTVLRIVTAKTEIEAQRKYD
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHH
ELQSNYHLQAQLVSYAGDTGIDISRYADSDALSTHTEGLTSYVMRPDGSGKPLTAGDVKK
HHHCCCEEEEEHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
RFASVTRGSDLILVGTPQQVADRIEEHARISGTSGYMLNPLISPGSLEDFVELVIPELQK
HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH
RGLYRTQPQSGTFRSRLREDRSSHLPESAYGASFRFD
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: an alkanesulfonate; O2; FMNH2 [C]

Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]