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The map label for this gene is yecS [H]

Identifier: 77459026

GI number: 77459026

Start: 3227695

End: 3228540

Strand: Reverse

Name: yecS [H]

Synonym: Pfl01_2801

Alternate gene names: 77459026

Gene position: 3228540-3227695 (Counterclockwise)

Preceding gene: 77459027

Following gene: 77459025

Centisome position: 50.15

GC content: 58.87

Gene sequence:

>846_bases
ATGACAGCCATTAACCCGCATCCGGCCAAAGCGGCTGTTACCCCGCAAAAGCAGCCGCCACTGACACGTCAGCTGTTCGG
CTTTCGCACGCGCCTGTATCTGACGTGGGCGGCGCTGTCGGGTCTGGGCGTGTGGTTTTTCATGCGCTTCGATCTGAAGT
TTTCGATCATTCTGGAGAAGTGGCCCAACCTGGTCGGCCTGCATCTGGGCCCGAACGGGTTCTTGCAGGGCGCTGCGCTG
ACGATATTCCTGTGTTTCTGCTCGATCTGGTTTTCGTTATTGCTGGGCTTTGTCACCGCGCTGGCCAGGCTGTCGAGCAG
CGCCGTGGCATTTGGTATCGCCAGCTTCTACGCCTCGTTCTTTCGCGGCACGCCACTGTTGATCCAGATCCTGTTGATCT
ATCTGGGGCTGCCGCAGTTGGGCGTGGTGCCGGGTGCAATCAGCGCCGGGATCATCGCGCTGTCGCTCAACTACGGGGCT
TATCTGAGTGAGATTTTTCGTGCCGGCATTCTCGCGGTTGCCCCTGGTCAGCGCGAAGCAGCAGCCGCACTGGGCCTGAG
ACCGGCCGCGACGTTCATCCATATCATCCTGCCGCAAGCCATGCGCACGATCATTCCGCCGACCACCAGCCAGTTCATCT
CGATGCTCAAGGATTCTTCCCTGATTTCGGTCATGGGGGTCTGGGAAGTGATGTTTCTGGCGCAGTCGTACGGGCGTTCG
TCCTACCGTTACATTGAAATGCTGACCACCGCAGCCGCCATCTATTGGCTGTTATCCATCGGTCTCGAACTGATCCAGCA
TCGCCTCGAACGCCATTACGGCAGAGGCTTCAAGCATCAGCGCTGA

Upstream 100 bases:

>100_bases
CGCAATGGAATGCGAAAGTCACCGAAGTCATCGCACAACTCAAGACTGACGGCACGCTGAGCAAAATATCCCGCAAGTGG
ATCGGTTCTGATATCAGCCA

Downstream 100 bases:

>100_bases
GCCATTCCGTTAAATGATCTCTTGCAGGAACCCAGATGTCCGATCCTAAACCTCTGCTGTTTGCACTTTATGAACAAGCC
AGCGTCGGGTGCGGCGGTGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTAINPHPAKAAVTPQKQPPLTRQLFGFRTRLYLTWAALSGLGVWFFMRFDLKFSIILEKWPNLVGLHLGPNGFLQGAAL
TIFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGA
YLSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRS
SYRYIEMLTTAAAIYWLLSIGLELIQHRLERHYGRGFKHQR

Sequences:

>Translated_281_residues
MTAINPHPAKAAVTPQKQPPLTRQLFGFRTRLYLTWAALSGLGVWFFMRFDLKFSIILEKWPNLVGLHLGPNGFLQGAAL
TIFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGA
YLSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRS
SYRYIEMLTTAAAIYWLLSIGLELIQHRLERHYGRGFKHQR
>Mature_280_residues
TAINPHPAKAAVTPQKQPPLTRQLFGFRTRLYLTWAALSGLGVWFFMRFDLKFSIILEKWPNLVGLHLGPNGFLQGAALT
IFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAY
LSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRSS
YRYIEMLTTAAAIYWLLSIGLELIQHRLERHYGRGFKHQR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=39.9038461538462, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=32.512315270936, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=30.7339449541284, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786873, Length=206, Percent_Identity=32.0388349514563, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788645, Length=236, Percent_Identity=30.0847457627119, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI48994930, Length=127, Percent_Identity=37.007874015748, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786874, Length=240, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787087, Length=229, Percent_Identity=27.9475982532751, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87082239, Length=270, Percent_Identity=25.9259259259259, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=29.2237442922374, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31014; Mature: 30883

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAINPHPAKAAVTPQKQPPLTRQLFGFRTRLYLTWAALSGLGVWFFMRFDLKFSIILEK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WPNLVGLHLGPNGFLQGAALTIFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASF
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGILAVAPGQREA
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHCCEEEECCCCHHH
AAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRS
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
SYRYIEMLTTAAAIYWLLSIGLELIQHRLERHYGRGFKHQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TAINPHPAKAAVTPQKQPPLTRQLFGFRTRLYLTWAALSGLGVWFFMRFDLKFSIILEK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WPNLVGLHLGPNGFLQGAALTIFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASF
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGILAVAPGQREA
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHCCEEEECCCCHHH
AAALGLRPAATFIHIILPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRS
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
SYRYIEMLTTAAAIYWLLSIGLELIQHRLERHYGRGFKHQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]