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The map label for this gene is ygaD [H]

Identifier: 77459014

GI number: 77459014

Start: 3215214

End: 3215729

Strand: Reverse

Name: ygaD [H]

Synonym: Pfl01_2789

Alternate gene names: 77459014

Gene position: 3215729-3215214 (Counterclockwise)

Preceding gene: 77459015

Following gene: 77459013

Centisome position: 49.95

GC content: 56.4

Gene sequence:

>516_bases
ATGTCTATTGCCGACGACACTGTTCACTACCTGCGCGCCAATGGTTTGGTGCTCACCACAGCGGAGTCTTGTACCGCCGG
TAAAATTGTGACGCTGTTATCCGAGGTCGAGGGTAGTGGCGAGTTCATCGAGTGCGGGTACGTGGTGTATTCGCCTCAGG
CGAAACAACGCCTCCTGCATGTCAAACCGCAGACCATCGAAACGTTCAACCTCACCAGCGTGGAAGTCGCGCGTGAAATG
GCAATGGGCGCATTGCGCGACAGTACCGCCAACGTTGCCGTTGCTACAACGGGCATTCTCGGCCCGGACGATGTAGACGG
TATCCCGGCTGGCACGATCTGCTTTGCCTGGGCGTTTCAGGTAGCTGATGAGTGTTGCGTGTTCAGTCACCAGCATCGCT
TCTGCGGCGGACGCTGTGAAGTACAGAAATACGCCACCGAGTATGCGTTGCAGTACTTGACGCGTTTCCATCAGCGAGTT
CTGCAAGGTGAGAATGGTGAGCCCGATGAGCGATGA

Upstream 100 bases:

>100_bases
TATGTTGAACGATACCGAATGGCGTGACCTGCGAAGGGGGGCAGATGAAGCCTATCTGCGTGCCGTCGCTGGTGAGGATT
ACCACTGAGGTCATCAGCTC

Downstream 100 bases:

>100_bases
GCGAAACCGTCCCCACTTGCGTAGCCGGAATTATCCAATACGCGAGGACATGGCCTATCAGTTGAAAGTCTGGATCTCCG
TTATTGTCCAGGAAGACTGA

Product: CinA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSIADDTVHYLRANGLVLTTAESCTAGKIVTLLSEVEGSGEFIECGYVVYSPQAKQRLLHVKPQTIETFNLTSVEVAREM
AMGALRDSTANVAVATTGILGPDDVDGIPAGTICFAWAFQVADECCVFSHQHRFCGGRCEVQKYATEYALQYLTRFHQRV
LQGENGEPDER

Sequences:

>Translated_171_residues
MSIADDTVHYLRANGLVLTTAESCTAGKIVTLLSEVEGSGEFIECGYVVYSPQAKQRLLHVKPQTIETFNLTSVEVAREM
AMGALRDSTANVAVATTGILGPDDVDGIPAGTICFAWAFQVADECCVFSHQHRFCGGRCEVQKYATEYALQYLTRFHQRV
LQGENGEPDER
>Mature_170_residues
SIADDTVHYLRANGLVLTTAESCTAGKIVTLLSEVEGSGEFIECGYVVYSPQAKQRLLHVKPQTIETFNLTSVEVAREMA
MGALRDSTANVAVATTGILGPDDVDGIPAGTICFAWAFQVADECCVFSHQHRFCGGRCEVQKYATEYALQYLTRFHQRVL
QGENGEPDER

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=163, Percent_Identity=36.1963190184049, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1787818, Length=108, Percent_Identity=45.3703703703704, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 18725; Mature: 18594

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIADDTVHYLRANGLVLTTAESCTAGKIVTLLSEVEGSGEFIECGYVVYSPQAKQRLLH
CCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECEEEECCHHHHHHEE
VKPQTIETFNLTSVEVAREMAMGALRDSTANVAVATTGILGPDDVDGIPAGTICFAWAFQ
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VADECCVFSHQHRFCGGRCEVQKYATEYALQYLTRFHQRVLQGENGEPDER
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SIADDTVHYLRANGLVLTTAESCTAGKIVTLLSEVEGSGEFIECGYVVYSPQAKQRLLH
CCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECEEEECCHHHHHHEE
VKPQTIETFNLTSVEVAREMAMGALRDSTANVAVATTGILGPDDVDGIPAGTICFAWAFQ
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VADECCVFSHQHRFCGGRCEVQKYATEYALQYLTRFHQRVLQGENGEPDER
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]