| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459013
Identifier: 77459013
GI number: 77459013
Start: 3214078
End: 3214953
Strand: Reverse
Name: 77459013
Synonym: Pfl01_2788
Alternate gene names: NA
Gene position: 3214953-3214078 (Counterclockwise)
Preceding gene: 77459014
Following gene: 77459012
Centisome position: 49.93
GC content: 56.96
Gene sequence:
>876_bases ATGTTCCTACATAACAAACGACTTCAATACACCGTGCGCGTTGCTCAGCCCAATCCGGGGTTGGCCAATCTTCTACTGGA ACAATTCGGGGGAGCCCAAGGGGAACTCGCTGCAGCTTCACGCTACTTCACACAGGCGTTGGCCGAAGATGATCCAGGCA GAAAGGATCTCCTTATGGATATTGCCACCGAGGAGCTCAGCCACCTTGAGATCGTCGGGTCGATTATCGTGATGTTGAAC AAGGGCGCCAAAGGGCAAATGGCCGAAGGTGTCGAGGAAGAGGGCGAGTTGTATCGCGCCATCAACGGGGCCGGCAACGA TTCCCACATCACAAGTCTGTTGTACGGAGCGGGTGCTCCCTTGACCAACTCGGCAGGCGTTCCCTGGTCAGCGGCTTACG TCGATACCATCGGCGAACCTACTGCAGACATGCGTTCCAATATCGCCGCTGAGGCCAGGGCGAAGATCGTCTACGAGCGT TTGATGAATGTCACAGATGATCCGGGTGTAAAGGAAGCCCTCGGATTTCTGATGACCCGTGAAATCGCCCATCAACTGTC TTTCGAAAAAGCACTGCACGCCATCCAGCCTAATTTCCCTCAGGGCAAACTGCCGGGTATGCCTGAATTCACCTTCAACA TGTCTCAGGGCGAAGGCAGCACCCGCGGGCCGTGGAACGAAGGGGAGGACTGGGAGTTCGTAGAGAATCCATCGCCGGCG GTGGATGGAGGCGAGGGCACCGCGACTGTGCAATTGAGCGCCGAGGATGAAGCGCTGCTCATGGACATGAAAGCCAGGAC GATGTCCGACCCAGACAGCAATCCGATCACGGGTGCGGACCTGGGGGCGGGTGTGCAAGGCGAACCACAACCTTAA
Upstream 100 bases:
>100_bases TTTGAAATTAACCCCGGCGCATTTGCTTCAGATGAATGTGGGTTGGCATTCGGTCTATTGCCGAGTGAACGGCAGCCCTG ATGCACCTGAGGAGAATGTC
Downstream 100 bases:
>100_bases CGACGCGACCGCACGCCAAAAGGCGTGCGGTTTTTCCATCTCAAGAAAACAGGAGGGTGCGATGTCCGAGCCGTTGACCT CATCTGGCGCAACACTTCGC
Product: manganese containing catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFLHNKRLQYTVRVAQPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMDIATEELSHLEIVGSIIVMLN KGAKGQMAEGVEEEGELYRAINGAGNDSHITSLLYGAGAPLTNSAGVPWSAAYVDTIGEPTADMRSNIAAEARAKIVYER LMNVTDDPGVKEALGFLMTREIAHQLSFEKALHAIQPNFPQGKLPGMPEFTFNMSQGEGSTRGPWNEGEDWEFVENPSPA VDGGEGTATVQLSAEDEALLMDMKARTMSDPDSNPITGADLGAGVQGEPQP
Sequences:
>Translated_291_residues MFLHNKRLQYTVRVAQPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMDIATEELSHLEIVGSIIVMLN KGAKGQMAEGVEEEGELYRAINGAGNDSHITSLLYGAGAPLTNSAGVPWSAAYVDTIGEPTADMRSNIAAEARAKIVYER LMNVTDDPGVKEALGFLMTREIAHQLSFEKALHAIQPNFPQGKLPGMPEFTFNMSQGEGSTRGPWNEGEDWEFVENPSPA VDGGEGTATVQLSAEDEALLMDMKARTMSDPDSNPITGADLGAGVQGEPQP >Mature_291_residues MFLHNKRLQYTVRVAQPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMDIATEELSHLEIVGSIIVMLN KGAKGQMAEGVEEEGELYRAINGAGNDSHITSLLYGAGAPLTNSAGVPWSAAYVDTIGEPTADMRSNIAAEARAKIVYER LMNVTDDPGVKEALGFLMTREIAHQLSFEKALHAIQPNFPQGKLPGMPEFTFNMSQGEGSTRGPWNEGEDWEFVENPSPA VDGGEGTATVQLSAEDEALLMDMKARTMSDPDSNPITGADLGAGVQGEPQP
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 31160; Mature: 31160
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLHNKRLQYTVRVAQPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMD CCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH IATEELSHLEIVGSIIVMLNKGAKGQMAEGVEEEGELYRAINGAGNDSHITSLLYGAGAP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC LTNSAGVPWSAAYVDTIGEPTADMRSNIAAEARAKIVYERLMNVTDDPGVKEALGFLMTR CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EIAHQLSFEKALHAIQPNFPQGKLPGMPEFTFNMSQGEGSTRGPWNEGEDWEFVENPSPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCC VDGGEGTATVQLSAEDEALLMDMKARTMSDPDSNPITGADLGAGVQGEPQP CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFLHNKRLQYTVRVAQPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMD CCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH IATEELSHLEIVGSIIVMLNKGAKGQMAEGVEEEGELYRAINGAGNDSHITSLLYGAGAP HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC LTNSAGVPWSAAYVDTIGEPTADMRSNIAAEARAKIVYERLMNVTDDPGVKEALGFLMTR CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EIAHQLSFEKALHAIQPNFPQGKLPGMPEFTFNMSQGEGSTRGPWNEGEDWEFVENPSPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCC VDGGEGTATVQLSAEDEALLMDMKARTMSDPDSNPITGADLGAGVQGEPQP CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]