| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459001
Identifier: 77459001
GI number: 77459001
Start: 3201700
End: 3202131
Strand: Reverse
Name: 77459001
Synonym: Pfl01_2776
Alternate gene names: NA
Gene position: 3202131-3201700 (Counterclockwise)
Preceding gene: 77459003
Following gene: 77458999
Centisome position: 49.73
GC content: 57.64
Gene sequence:
>432_bases TTGCGTGGCGTTGAGGATCGGGCTCACCGCGAGGTTGATCGGGCCCGGGAGGAGGGGACAGCCGCAGTAAGCCAATCAAA AGTAGCCAGCCGCAGGTGCGACGACTTGCGACGTAGGTTGGAGTCGGCCCAGAGCGAGCTCAGCCAAGCGGAGCAACGTA CTGCGGCGCAGTTGGCCCGCGCAGAAACTTTAGAACAACAGTTGATTCAGATACGCCAGCTGTCAGAGATCAAGCGCAAG CCGCGAGTCAGAAAAAACCGACATCAAGCAACCCTAAAGACTAACCGCAGGTGTCAGCTAGCGGCCATTAGAGAACCCTC AAAAGCGACCGCTATCGGCCATAAGCGGACGCTCGGAAGCGACTGCTATCGGCCAATAGGAGACACTCAGTCACTAACAG CCAAGTTTTCTGGCTCGCCAGAACGCCGTTAG
Upstream 100 bases:
>100_bases TGAACGGCACGATGCCCAGGGGCAAAATCAAATTCTCCAACAGGAACTCCACTTGCTACGACTCAAGGCCGAGCAGGAGC GAATCACACAGGAGAACTAT
Downstream 100 bases:
>100_bases AAAGTGAAAAATGGAGGTCAGTAAGATGGATCTATTAAGCCAGCCTGGCCCAGAATTCTTCTGCAGATAAGCTAATGGGG GCTTTAGGTCGAGTGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRGVEDRAHREVDRAREEGTAAVSQSKVASRRCDDLRRRLESAQSELSQAEQRTAAQLARAETLEQQLIQIRQLSEIKRK PRVRKNRHQATLKTNRRCQLAAIREPSKATAIGHKRTLGSDCYRPIGDTQSLTAKFSGSPERR
Sequences:
>Translated_143_residues MRGVEDRAHREVDRAREEGTAAVSQSKVASRRCDDLRRRLESAQSELSQAEQRTAAQLARAETLEQQLIQIRQLSEIKRK PRVRKNRHQATLKTNRRCQLAAIREPSKATAIGHKRTLGSDCYRPIGDTQSLTAKFSGSPERR >Mature_143_residues MRGVEDRAHREVDRAREEGTAAVSQSKVASRRCDDLRRRLESAQSELSQAEQRTAAQLARAETLEQQLIQIRQLSEIKRK PRVRKNRHQATLKTNRRCQLAAIREPSKATAIGHKRTLGSDCYRPIGDTQSLTAKFSGSPERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16274; Mature: 16274
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVEDRAHREVDRAREEGTAAVSQSKVASRRCDDLRRRLESAQSELSQAEQRTAAQLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETLEQQLIQIRQLSEIKRKPRVRKNRHQATLKTNRRCQLAAIREPSKATAIGHKRTLGS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCH DCYRPIGDTQSLTAKFSGSPERR HHCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MRGVEDRAHREVDRAREEGTAAVSQSKVASRRCDDLRRRLESAQSELSQAEQRTAAQLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETLEQQLIQIRQLSEIKRKPRVRKNRHQATLKTNRRCQLAAIREPSKATAIGHKRTLGS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCH DCYRPIGDTQSLTAKFSGSPERR HHCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA